RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 CRAMP1Q96RY5 1269 aa15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 RTFDC1Q9BY42 306 aaPredicted RBP15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 WDCPQ9H6R7 721 aa15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 CATSPERBQ9H7T0 1116 aa15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 SLC30A1Q9Y6M5 507 aa15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 DYNC1LI2O43237 492 aaPredicted RBP15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 HIST1H2AGP0C0S8 130 aaPredicted RBP15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 HIST1H2ADP20671 130 aa15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 SV2CQ496J9 727 aa15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 P3H2Q8IVL5 708 aa15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 EFCAB3Q8N7B9 438 aa15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 FLCNQ8NFG4 579 aa15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 HIST1H2AHQ96KK5 128 aa15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 HIST1H2AJQ99878 128 aa15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 H2AFJQ9BTM1 129 aa15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 CISHQ9NSE2 258 aa15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 DDIT4Q9NX09 232 aa15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 C2CD2Q9Y426 696 aa15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 PCDHA3Q9Y5H8 950 aa15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 PXDNQ92626 1479 aa15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 PTK6Q13882 451 aa15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 CNGA2Q16280 664 aa15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 PREPLQ4J6C6 727 aaPredicted RBP15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 AGKQ53H12 422 aa15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 INTS5Q6P9B9 1019 aaKnown RBP15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 FAM131BQ86XD5 332 aa15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 COLGALT1Q8NBJ5 622 aa15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 SH3GL1Q99961 368 aa15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 BLOC1S4Q9NUP1 217 aa15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 PNMA8BQ9ULN7 279 aaPredicted RBP15.82■□□□□ 0.12
SHROOM4-201ENST00000289292 ASB14A6NK59 587 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 PYGLP06737 847 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 TMEM119Q4V9L6 283 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 CENPLQ8N0S6 344 aaPredicted RBP15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 NRXN1Q9ULB1 1477 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 RNF103O00237 685 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 FAM58BPP0C7Q3 252 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 AGAP9Q5VTM2 703 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 ZBTB49Q6ZSB9 765 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 RXFP2Q8WXD0 754 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 MARK4Q96L34 752 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 DAPK2Q9UIK4 370 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 RGS5O15539 181 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 BOLA3Q53S33 107 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 SCFD2Q8WU76 684 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 CGRRF1Q99675 332 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 TRIM62Q9BVG3 475 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 CYP39A1Q9NYL5 469 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 AP4S1Q9Y587 144 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 C1orf167Q5SNV9 1468 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 LMTK2Q8IWU2 1503 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 ENTPD3O75355 529 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 ARIH2O95376 493 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 VTNP04004 478 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 CYP2F1P24903 491 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 CASP5P51878 434 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 SV2AQ7L0J3 742 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 APOPT1Q96IL0 206 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 FICDQ9BVA6 458 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 RIC8BQ9NVN3 520 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 USE1Q9NZ43 259 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 FKBP6O75344 327 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 H2AFYO75367 372 aaKnown RBP15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 CHKAP35790 457 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 SLC12A3P55017 1021 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 TRMT5Q32P41 509 aaKnown RBP15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 IER5Q5VY09 327 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 CYP2R1Q6VVX0 501 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 SRPK1Q96SB4 655 aaKnown RBP15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 SEPHS2Q99611 448 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 POLLQ9UGP5 575 aa15.81■□□□□ 0.12
SHROOM4-201ENST00000289292 FAM86B1E9PN63 330 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 GOLGA8TH3BQL2 631 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 PGS1Q32NB8 556 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 C16orf46Q6P387 395 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 C4orf22Q6V702 233 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 TMPRSS6Q8IU80 811 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 ELMOD1Q8N336 334 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 PACSIN3Q9UKS6 424 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 AP4E1Q9UPM8 1137 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 CES2O00748 559 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 VEGFAP15692 232 aaPredicted RBP15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 CLCN3P51790 818 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 MFSD7Q6UXD7 560 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 RIPOR1Q6ZS17 1223 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 HS6ST3Q8IZP7 471 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 PHF21BQ96EK2 531 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 CYLDQ9NQC7 956 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 ABCA9Q8IUA7 1624 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 E7ENQ6 273 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 PGK2P07205 417 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 FDX1P10109 184 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 TBCELQ5QJ74 424 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 SH3TC2Q8TF17 1288 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 PAIP1Q9H074 479 aaKnown RBP15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 NDUFA13Q9P0J0 144 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 CDV3Q9UKY7 258 aaKnown RBP15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 ABT1Q9ULW3 272 aaKnown RBP15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 ADGRA3Q8IWK6 1321 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms