RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 SLC2A14Q8TDB8 520 aa14.86□□□□□ -0.03
TPM1-202ENST00000288398 GZF1Q9H116 711 aaPredicted RBP14.86□□□□□ -0.03
TPM1-202ENST00000288398 CCSER2Q9H7U1 834 aa14.86□□□□□ -0.03
TPM1-202ENST00000288398 FAM49BQ9NUQ9 324 aa14.86□□□□□ -0.03
TPM1-202ENST00000288398 TMEM30AQ9NV96 361 aa14.86□□□□□ -0.03
TPM1-202ENST00000288398 DMAC2Q9NW81 257 aa14.86□□□□□ -0.03
TPM1-202ENST00000288398 DEC1Q9P2X7 70 aa14.86□□□□□ -0.03
TPM1-202ENST00000288398 ATP6V1DQ9Y5K8 247 aa14.86□□□□□ -0.03
TPM1-202ENST00000288398 SPTBN2O15020 2390 aa14.86□□□□□ -0.03
TPM1-202ENST00000288398 ATG2BQ96BY7 2078 aa14.86□□□□□ -0.03
TPM1-202ENST00000288398 PTPRDP23468 1912 aa14.86□□□□□ -0.03
TPM1-202ENST00000288398 GREB1Q4ZG55 1949 aa14.86□□□□□ -0.03
TPM1-202ENST00000288398 BCLAF3A2AJT9 711 aaKnown RBP14.85□□□□□ -0.03
TPM1-202ENST00000288398 KHNYNO15037 678 aaKnown RBP14.85□□□□□ -0.03
TPM1-202ENST00000288398 KLRC4O43908 158 aa14.85□□□□□ -0.03
TPM1-202ENST00000288398 TLR5O60602 858 aa14.85□□□□□ -0.03
TPM1-202ENST00000288398 VNN1O95497 513 aa14.85□□□□□ -0.03
TPM1-202ENST00000288398 SLC6A11P48066 632 aa14.85□□□□□ -0.03
TPM1-202ENST00000288398 VAMP7P51809 220 aa14.85□□□□□ -0.03
TPM1-202ENST00000288398 DLG4P78352 724 aa14.85□□□□□ -0.03
TPM1-202ENST00000288398 ORC1Q13415 861 aa14.85□□□□□ -0.03
TPM1-202ENST00000288398 PKP1Q13835 747 aa14.85□□□□□ -0.03
TPM1-202ENST00000288398 SNX30Q5VWJ9 437 aa14.85□□□□□ -0.03
TPM1-202ENST00000288398 PMS2CLQ68D20 193 aa14.85□□□□□ -0.03
TPM1-202ENST00000288398 INTS8Q75QN2 995 aaKnown RBP14.85□□□□□ -0.03
TPM1-202ENST00000288398 SV2AQ7L0J3 742 aa14.85□□□□□ -0.03
TPM1-202ENST00000288398 LPCAT2Q7L5N7 544 aa14.85□□□□□ -0.03
TPM1-202ENST00000288398 TADA2BQ86TJ2 420 aa14.85□□□□□ -0.03
TPM1-202ENST00000288398 RASSF3Q86WH2 238 aa14.85□□□□□ -0.03
TPM1-202ENST00000288398 FUKQ8N0W3 1084 aa14.85□□□□□ -0.03
TPM1-202ENST00000288398 MDGA1Q8NFP4 955 aa14.85□□□□□ -0.03
TPM1-202ENST00000288398 JAKMIP2Q96AA8 810 aa14.85□□□□□ -0.03
TPM1-202ENST00000288398 KCTD10Q9H3F6 313 aa14.85□□□□□ -0.03
TPM1-202ENST00000288398 MMRN2Q9H8L6 949 aa14.85□□□□□ -0.03
TPM1-202ENST00000288398 SPAG17Q6Q759 2223 aa14.85□□□□□ -0.03
TPM1-202ENST00000288398 TNFRSF10BO14763 440 aa14.84□□□□□ -0.03
TPM1-202ENST00000288398 HLA-DRAP01903 254 aa14.84□□□□□ -0.03
TPM1-202ENST00000288398 NR2F2P24468 414 aa14.84□□□□□ -0.03
TPM1-202ENST00000288398 C10orf76Q5T2E6 689 aa14.84□□□□□ -0.03
TPM1-202ENST00000288398 TCEAL6Q6IPX3 200 aa14.84□□□□□ -0.03
TPM1-202ENST00000288398 SDE2Q6IQ49 451 aa14.84□□□□□ -0.03
TPM1-202ENST00000288398 CRYBG2Q8N1P7 616 aa14.84□□□□□ -0.03
TPM1-202ENST00000288398 NAT16Q8N8M0 369 aa14.84□□□□□ -0.03
TPM1-202ENST00000288398 IL17RCQ8NAC3 791 aa14.84□□□□□ -0.03
TPM1-202ENST00000288398 TMEM174Q8WUU8 243 aa14.84□□□□□ -0.03
TPM1-202ENST00000288398 HMGB4Q8WW32 186 aa14.84□□□□□ -0.03
TPM1-202ENST00000288398 TCEAL3Q969E4 200 aa14.84□□□□□ -0.03
TPM1-202ENST00000288398 ELMO3Q96BJ8 720 aa14.84□□□□□ -0.03
TPM1-202ENST00000288398 XPO6Q96QU8 1125 aaKnown RBP14.84□□□□□ -0.03
TPM1-202ENST00000288398 NT5C1AQ9BXI3 368 aa14.84□□□□□ -0.03
TPM1-202ENST00000288398 SDCBP2Q9H190 292 aa14.84□□□□□ -0.03
TPM1-202ENST00000288398 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.84□□□□□ -0.03
TPM1-202ENST00000288398 SPHK2Q9NRA0 654 aa14.84□□□□□ -0.03
TPM1-202ENST00000288398 ANGPTL2Q9UKU9 493 aa14.84□□□□□ -0.03
TPM1-202ENST00000288398 SDK1Q7Z5N4 2213 aa14.84□□□□□ -0.03
TPM1-202ENST00000288398 TCRBV21S2A2A0A5A6 115 aa14.83□□□□□ -0.04
TPM1-202ENST00000288398 HOXC11O43248 304 aaPredicted RBP14.83□□□□□ -0.04
TPM1-202ENST00000288398 ASS1P00966 412 aaKnown RBP14.83□□□□□ -0.04
TPM1-202ENST00000288398 CD58P19256 250 aa14.83□□□□□ -0.04
TPM1-202ENST00000288398 PSMC2P35998 433 aaKnown RBP14.83□□□□□ -0.04
TPM1-202ENST00000288398 ATP5C1P36542 298 aaKnown RBP14.83□□□□□ -0.04
TPM1-202ENST00000288398 DPP6P42658 865 aa14.83□□□□□ -0.04
TPM1-202ENST00000288398 ASPAP45381 313 aa14.83□□□□□ -0.04
TPM1-202ENST00000288398 GAB4Q2WGN9 574 aa14.83□□□□□ -0.04
TPM1-202ENST00000288398 GRAMD4Q6IC98 578 aa14.83□□□□□ -0.04
TPM1-202ENST00000288398 SPOPLQ6IQ16 392 aa14.83□□□□□ -0.04
TPM1-202ENST00000288398 PAQR9Q6ZVX9 377 aa14.83□□□□□ -0.04
TPM1-202ENST00000288398 C12orf40Q86WS4 652 aa14.83□□□□□ -0.04
TPM1-202ENST00000288398 BBS7Q8IWZ6 715 aa14.83□□□□□ -0.04
TPM1-202ENST00000288398 FAM186BQ8IYM0 893 aa14.83□□□□□ -0.04
TPM1-202ENST00000288398 ZNF513Q8N8E2 541 aaPredicted RBP14.83□□□□□ -0.04
TPM1-202ENST00000288398 KCNV2Q8TDN2 545 aa14.83□□□□□ -0.04
TPM1-202ENST00000288398 PIGKQ92643 395 aa14.83□□□□□ -0.04
TPM1-202ENST00000288398 SMOQ99835 787 aa14.83□□□□□ -0.04
TPM1-202ENST00000288398 CYP3A43Q9HB55 503 aa14.83□□□□□ -0.04
TPM1-202ENST00000288398 RXFP3Q9NSD7 469 aa14.83□□□□□ -0.04
TPM1-202ENST00000288398 IL37Q9NZH6 218 aa14.83□□□□□ -0.04
TPM1-202ENST00000288398 HMGXB4Q9UGU5 601 aa14.83□□□□□ -0.04
TPM1-202ENST00000288398 TRAF3IP3Q9Y228 551 aa14.83□□□□□ -0.04
TPM1-202ENST00000288398 PCDHA5Q9Y5H7 936 aa14.83□□□□□ -0.04
TPM1-202ENST00000288398 FAM92AA1XBS5 289 aa14.82□□□□□ -0.04
TPM1-202ENST00000288398 NEDD8-MDP1E9PL57 170 aa14.82□□□□□ -0.04
TPM1-202ENST00000288398 SGK1O00141 431 aa14.82□□□□□ -0.04
TPM1-202ENST00000288398 MAPK13O15264 365 aa14.82□□□□□ -0.04
TPM1-202ENST00000288398 TULP3O75386 442 aa14.82□□□□□ -0.04
TPM1-202ENST00000288398 ZDHHC11BP0C7U3 371 aa14.82□□□□□ -0.04
TPM1-202ENST00000288398 ACO1P21399 889 aaKnown RBP14.82□□□□□ -0.04
TPM1-202ENST00000288398 GCLMP48507 274 aa14.82□□□□□ -0.04
TPM1-202ENST00000288398 SLC8A3P57103 927 aa14.82□□□□□ -0.04
TPM1-202ENST00000288398 TMEM92Q6UXU6 159 aa14.82□□□□□ -0.04
TPM1-202ENST00000288398 TTC39CQ8N584 583 aa14.82□□□□□ -0.04
TPM1-202ENST00000288398 C12orf29Q8N999 325 aa14.82□□□□□ -0.04
TPM1-202ENST00000288398 CYFIP2Q96F07 1278 aa14.82□□□□□ -0.04
TPM1-202ENST00000288398 ZFRQ96KR1 1074 aaKnown RBP14.82□□□□□ -0.04
TPM1-202ENST00000288398 HNRNPABQ99729 332 aaKnown RBP14.82□□□□□ -0.04
TPM1-202ENST00000288398 LSM14BQ9BX40 385 aaKnown RBP14.82□□□□□ -0.04
TPM1-202ENST00000288398 BBS2Q9BXC9 721 aa14.82□□□□□ -0.04
TPM1-202ENST00000288398 NUSAP1Q9BXS6 441 aaKnown RBP14.82□□□□□ -0.04
TPM1-202ENST00000288398 NIF3L1Q9GZT8 377 aa14.82□□□□□ -0.04
TPM1-202ENST00000288398 SCAND2PQ9GZW5 306 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms