RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 CHADO15335 359 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 MED7O43513 233 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 LRCH4O75427 683 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 DLDP09622 509 aaKnown RBP10.8□□□□□ -0.68
SKA1-201ENST00000285116 STIP1P31948 543 aaKnown RBP10.8□□□□□ -0.68
SKA1-201ENST00000285116 CCNFP41002 786 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 CNTN2Q02246 1040 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 TNFAIP1Q13829 316 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 MTERF2Q49AM1 385 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 ZBTB41Q5SVQ8 909 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 ANGEL2Q5VTE6 544 aaKnown RBP10.8□□□□□ -0.68
SKA1-201ENST00000285116 GPAT2Q6NUI2 795 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 TRIM42Q8IWZ5 723 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 FBXO36Q8NEA4 188 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 TSSK1BQ9BXA7 367 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 TMEM120AQ9BXJ8 343 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 OCEL1Q9H607 264 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 ZNF302Q9NR11 478 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 NDE1Q9NXR1 346 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 FBXO40Q9UH90 709 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 ZNF214Q9UL59 606 aaPredicted RBP10.8□□□□□ -0.68
SKA1-201ENST00000285116 RIPK3Q9Y572 518 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 GAS2O43903 313 aaKnown RBP10.79□□□□□ -0.68
SKA1-201ENST00000285116 TOM1L1O75674 476 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 C1QAP02745 245 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 PABPC4LP0CB38 370 aaKnown RBP10.79□□□□□ -0.68
SKA1-201ENST00000285116 AMPD1P23109 780 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 ASPAP45381 313 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 AP2B1P63010 937 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 KCNJ11Q14654 390 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 TRMT5Q32P41 509 aaKnown RBP10.79□□□□□ -0.68
SKA1-201ENST00000285116 NBPF12Q5TAG4 269 aaPredicted RBP10.79□□□□□ -0.68
SKA1-201ENST00000285116 TMPRSS6Q8IU80 811 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 SLC4A11Q8NBS3 891 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 MIPOL1Q8TD10 442 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 USP6NLQ92738 828 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 ZBTB45Q96K62 511 aaPredicted RBP10.79□□□□□ -0.68
SKA1-201ENST00000285116 FAM161BQ96MY7 647 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 C7orf26Q96N11 449 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 TARS2Q9BW92 718 aaKnown RBP10.79□□□□□ -0.68
SKA1-201ENST00000285116 WDR91A4D1P6 747 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 CIB2O75838 187 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 TMEM63AO94886 807 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 EDN1P05305 212 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 SSTR1P30872 391 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 GDF10P55107 478 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 ZNF280AP59817 542 aaPredicted RBP10.79□□□□□ -0.68
SKA1-201ENST00000285116 MAP7Q14244 749 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 MYBPC3Q14896 1274 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 TBCCQ15814 346 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 SH2D4BQ5SQS7 431 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 RHPN2Q8IUC4 686 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 ANKMY2Q8IV38 441 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 DNERQ8NFT8 737 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 RSAD2Q8WXG1 361 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 SLC7A3Q8WY07 619 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 ATG4CQ96DT6 458 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 BCO2Q9BYV7 579 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 XYLT2Q9H1B5 865 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 RSAD1Q9HA92 442 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 FBXO6Q9NRD1 293 aaPredicted RBP10.79□□□□□ -0.68
SKA1-201ENST00000285116 KCNK4Q9NYG8 393 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 ZNF112Q9UJU3 913 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 CPSF3Q9UKF6 684 aaKnown RBP10.79□□□□□ -0.68
SKA1-201ENST00000285116 RPS6KL1Q9Y6S9 549 aa10.79□□□□□ -0.68
SKA1-201ENST00000285116 ZNF487B1APH4 448 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 ADM5C9JUS6 153 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 TRDMT1O14717 391 aaKnown RBP10.78□□□□□ -0.68
SKA1-201ENST00000285116 OGTO15294 1046 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 B4GALT4O60513 344 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 CST8O60676 142 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 MT-ND3P03897 115 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 SETSIPP0DME0 302 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 PROZP22891 400 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 PSMA2P25787 234 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 USP4Q13107 963 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 MTMR2Q13614 643 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 EFTUD2Q15029 972 aaKnown RBP eCLIP10.78□□□□□ -0.68
SKA1-201ENST00000285116 NOMO1Q15155 1222 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 DUOXA2Q1HG44 320 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 C4orf22Q6V702 233 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 ACAD11Q709F0 780 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 NCAPG2Q86XI2 1143 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 MYLK4Q86YV6 388 aaPredicted RBP10.78□□□□□ -0.68
SKA1-201ENST00000285116 PALM2Q8IXS6 379 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 TFAP2BQ92481 460 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 HIC2Q96JB3 615 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 MRPL4Q9BYD3 311 aaKnown RBP10.78□□□□□ -0.68
SKA1-201ENST00000285116 GALNT8Q9NY28 637 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 XPO7Q9UIA9 1087 aaKnown RBP10.78□□□□□ -0.68
SKA1-201ENST00000285116 AGTPBP1Q9UPW5 1226 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 A0A0C4DFX4 3053 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 TTC36A6NLP5 189 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 MSCO60682 206 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 LPXNO60711 386 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 MAFO75444 373 aaPredicted RBP10.78□□□□□ -0.68
SKA1-201ENST00000285116 CST3P01034 146 aaPredicted RBP10.78□□□□□ -0.68
SKA1-201ENST00000285116 KRT3P12035 628 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 IL1R2P27930 398 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 HIRAP54198 1017 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms