RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 GSTA5Q7RTV2 222 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 RFX6Q8HWS3 928 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 MYCBPAPQ8TBZ2 947 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 FBXO25Q8TCJ0 367 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 BCL7CQ8WUZ0 217 aaPredicted RBP11.48□□□□□ -0.57
GGPS1-201ENST00000282841 ERP44Q9BS26 406 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 DCLK3Q9C098 648 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 TMEM39AQ9NV64 488 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 ASNSD1Q9NWL6 643 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 MFHAS1Q9Y4C4 1052 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 hCG_1818297A0A087WSY0 165 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 DCDC2CA8MYV0 355 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 PRPSAP2O60256 369 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 EOMESO95936 686 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 IFNB1P01574 187 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 PECAM1P16284 738 aaPredicted RBP11.48□□□□□ -0.57
GGPS1-201ENST00000282841 RPL17P18621 184 aaKnown RBP11.48□□□□□ -0.57
GGPS1-201ENST00000282841 AARSP49588 968 aaKnown RBP eCLIP11.48□□□□□ -0.57
GGPS1-201ENST00000282841 FAM189BP81408 668 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 TAP1Q03518 808 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 STILQ15468 1287 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 LRRC26Q2I0M4 334 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 TFDP3Q5H9I0 405 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 DCLRE1AQ6PJP8 1040 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 ZC3H18Q86VM9 953 aaKnown RBP11.48□□□□□ -0.57
GGPS1-201ENST00000282841 CCDC25Q86WR0 208 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 METTL23Q86XA0 190 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 RCOR2Q8IZ40 523 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 ATAD1Q8NBU5 361 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 URGCPQ8TCY9 931 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 SEPT8Q92599 483 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 CASD1Q96PB1 797 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 SLITRK6Q9H5Y7 841 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 ASIC3Q9UHC3 531 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 SUFUQ9UMX1 484 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 SLC27A5Q9Y2P5 690 aa11.48□□□□□ -0.57
GGPS1-201ENST00000282841 XPO1O14980 1071 aaKnown RBP11.47□□□□□ -0.57
GGPS1-201ENST00000282841 RPLP2P05387 115 aaKnown RBP11.47□□□□□ -0.57
GGPS1-201ENST00000282841 CHRNA3P32297 505 aa11.47□□□□□ -0.57
GGPS1-201ENST00000282841 MAN1A1P33908 653 aa11.47□□□□□ -0.57
GGPS1-201ENST00000282841 SLC11A1P49279 550 aa11.47□□□□□ -0.57
GGPS1-201ENST00000282841 NUMBP49757 651 aa11.47□□□□□ -0.57
GGPS1-201ENST00000282841 HADHQ16836 314 aaKnown RBP11.47□□□□□ -0.57
GGPS1-201ENST00000282841 HP1BP3Q5SSJ5 553 aaPredicted RBP11.47□□□□□ -0.57
GGPS1-201ENST00000282841 PPP1R2P3Q6NXS1 205 aa11.47□□□□□ -0.57
GGPS1-201ENST00000282841 RSPO2Q6UXX9 243 aaPredicted RBP11.47□□□□□ -0.57
GGPS1-201ENST00000282841 NIPA2Q8N8Q9 360 aa11.47□□□□□ -0.57
GGPS1-201ENST00000282841 PLVAPQ9BX97 442 aa11.47□□□□□ -0.57
GGPS1-201ENST00000282841 RASSF4Q9H2L5 321 aa11.47□□□□□ -0.57
GGPS1-201ENST00000282841 TMEM161AQ9NX61 479 aa11.47□□□□□ -0.57
GGPS1-201ENST00000282841 ZNF148Q9UQR1 794 aa11.47□□□□□ -0.57
GGPS1-201ENST00000282841 HEY1Q9Y5J3 304 aa11.47□□□□□ -0.57
GGPS1-201ENST00000282841 SNX10Q9Y5X0 201 aa11.47□□□□□ -0.57
GGPS1-201ENST00000282841 MAP2K7O14733 419 aa11.47□□□□□ -0.57
GGPS1-201ENST00000282841 CSF2RAP15509 400 aa11.47□□□□□ -0.57
GGPS1-201ENST00000282841 SLC8A3P57103 927 aa11.47□□□□□ -0.57
GGPS1-201ENST00000282841 DSC1Q08554 894 aa11.47□□□□□ -0.57
GGPS1-201ENST00000282841 TERF2Q15554 542 aa11.47□□□□□ -0.57
GGPS1-201ENST00000282841 INTS6LQ5JSJ4 861 aaKnown RBP11.47□□□□□ -0.57
GGPS1-201ENST00000282841 VWCEQ96DN2 955 aa11.47□□□□□ -0.57
GGPS1-201ENST00000282841 ZNF333Q96JL9 665 aa11.47□□□□□ -0.57
GGPS1-201ENST00000282841 SNRNP25Q9BV90 132 aaKnown RBP11.47□□□□□ -0.57
GGPS1-201ENST00000282841 DHX35Q9H5Z1 703 aaKnown RBP11.47□□□□□ -0.57
GGPS1-201ENST00000282841 HPCAL4Q9UM19 191 aa11.47□□□□□ -0.57
GGPS1-201ENST00000282841 F5H423 210 aaPredicted RBP11.46□□□□□ -0.57
GGPS1-201ENST00000282841 ECEL1O95672 775 aa11.46□□□□□ -0.57
GGPS1-201ENST00000282841 FYNP06241 537 aa11.46□□□□□ -0.57
GGPS1-201ENST00000282841 SETSIPP0DME0 302 aa11.46□□□□□ -0.57
GGPS1-201ENST00000282841 SKIP12755 728 aa11.46□□□□□ -0.57
GGPS1-201ENST00000282841 GRIK1P39086 918 aa11.46□□□□□ -0.57
GGPS1-201ENST00000282841 SULT1E1P49888 294 aa11.46□□□□□ -0.57
GGPS1-201ENST00000282841 GDF10P55107 478 aa11.46□□□□□ -0.57
GGPS1-201ENST00000282841 DUPD1Q68J44 220 aa11.46□□□□□ -0.57
GGPS1-201ENST00000282841 PRSS55Q6UWB4 352 aaPredicted RBP11.46□□□□□ -0.57
GGPS1-201ENST00000282841 TMEM86AQ8N2M4 240 aa11.46□□□□□ -0.57
GGPS1-201ENST00000282841 DNAJC5GQ8N7S2 189 aa11.46□□□□□ -0.57
GGPS1-201ENST00000282841 ACTL9Q8TC94 416 aa11.46□□□□□ -0.57
GGPS1-201ENST00000282841 SUSD3Q96L08 255 aa11.46□□□□□ -0.57
GGPS1-201ENST00000282841 UBN1Q9NPG3 1134 aa11.46□□□□□ -0.57
GGPS1-201ENST00000282841 ANLNQ9NQW6 1124 aa11.46□□□□□ -0.57
GGPS1-201ENST00000282841 CDH9Q9ULB4 789 aa11.46□□□□□ -0.57
GGPS1-201ENST00000282841 ATP8A1Q9Y2Q0 1164 aa11.46□□□□□ -0.57
GGPS1-201ENST00000282841 SQORQ9Y6N5 450 aa11.46□□□□□ -0.57
GGPS1-201ENST00000282841 M0QYT0 321 aa11.46□□□□□ -0.57
GGPS1-201ENST00000282841 M0QZQ0 153 aa11.46□□□□□ -0.57
GGPS1-201ENST00000282841 CAND2O75155 1236 aa11.46□□□□□ -0.57
GGPS1-201ENST00000282841 NCAM1P13591 858 aa11.46□□□□□ -0.57
GGPS1-201ENST00000282841 PCSK1P29120 753 aa11.46□□□□□ -0.57
GGPS1-201ENST00000282841 EPHB4P54760 987 aa11.46□□□□□ -0.57
GGPS1-201ENST00000282841 YWHAZP63104 245 aaKnown RBP11.46□□□□□ -0.57
GGPS1-201ENST00000282841 MRPS5P82675 430 aaKnown RBP11.46□□□□□ -0.57
GGPS1-201ENST00000282841 OTUD4Q01804 1114 aaKnown RBP11.46□□□□□ -0.57
GGPS1-201ENST00000282841 KRT81Q14533 505 aa11.46□□□□□ -0.57
GGPS1-201ENST00000282841 SLC7A14Q8TBB6 771 aa11.46□□□□□ -0.57
GGPS1-201ENST00000282841 RBM41Q96IZ5 413 aaKnown RBP11.46□□□□□ -0.57
GGPS1-201ENST00000282841 TSPAN18Q96SJ8 248 aa11.46□□□□□ -0.57
GGPS1-201ENST00000282841 CAPN9O14815 690 aa11.46□□□□□ -0.58
GGPS1-201ENST00000282841 KRT14P02533 472 aa11.46□□□□□ -0.58
GGPS1-201ENST00000282841 DEFB103AP81534 67 aa11.46□□□□□ -0.58
GGPS1-201ENST00000282841 DHX9Q08211 1270 aaKnown RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms