RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 PSMC1P62191 440 aaKnown RBP13.42□□□□□ -0.26
COL8A1-202ENST00000273342 DYNC1I2Q13409 638 aaKnown RBP13.42□□□□□ -0.26
COL8A1-202ENST00000273342 SPATA24Q86W54 205 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 CHSY1Q86X52 802 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 HOMEZQ8IX15 550 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 TMEM35BQ8NCS4 154 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 FAM81AQ8TBF8 368 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 PPP2R3CQ969Q6 453 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 MPP4Q96JB8 637 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 VCPIP1Q96JH7 1222 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 CISHQ9NSE2 258 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 KCNK4Q9NYG8 393 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 PCDHGB4Q9UN71 923 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 PLLPQ9Y342 182 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 PCDHGB5Q9Y5G0 923 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 HSD17B4P51659 736 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 INHBCP55103 352 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 SNRPFP62306 86 aaKnown RBP13.42□□□□□ -0.26
COL8A1-202ENST00000273342 PIGHQ14442 188 aaPredicted RBP13.42□□□□□ -0.26
COL8A1-202ENST00000273342 PSMD6Q15008 389 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 SH2D5Q6ZV89 423 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 SLC26A11Q86WA9 606 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 FAM192AQ9GZU8 254 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 VCX3BQ9H321 246 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 VCX3AQ9NNX9 186 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 IL1RAPL1Q9NZN1 696 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 LMCD1Q9NZU5 365 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 PPP1R1BQ9UD71 204 aaPredicted RBP13.42□□□□□ -0.26
COL8A1-202ENST00000273342 DNAJC16Q9Y2G8 782 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 CTDP1Q9Y5B0 961 aaPredicted RBP13.42□□□□□ -0.26
COL8A1-202ENST00000273342 PCDHA10Q9Y5I2 948 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 CAPN8A6NHC0 703 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 K7ERI5 159 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 KCNN4O15554 427 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 BUD23O43709 281 aaKnown RBP13.42□□□□□ -0.26
COL8A1-202ENST00000273342 CREB3O43889 395 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 KRT37O76014 449 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 CALB1P05937 261 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 CSH1P0DML2 217 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 CSH2P0DML3 217 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 CDH8P55286 799 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 CRADDP78560 199 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 TFAMQ00059 246 aaKnown RBP13.42□□□□□ -0.26
COL8A1-202ENST00000273342 SLC18A2Q05940 514 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 STX3Q13277 289 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 GSTA3Q16772 222 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 PTPN20Q4JDL3 420 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 EFHC1Q5JVL4 640 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 TTC39BQ5VTQ0 682 aaPredicted RBP13.42□□□□□ -0.26
COL8A1-202ENST00000273342 BSPRYQ5W0U4 402 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 DPY19L2Q6NUT2 758 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 SCYL2Q6P3W7 929 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 DHDDSQ86SQ9 333 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 CCDC60Q8IWA6 550 aaPredicted RBP13.42□□□□□ -0.26
COL8A1-202ENST00000273342 NETO2Q8NC67 525 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 S100A14Q9HCY8 104 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 MAN1C1Q9NR34 630 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 GREB1LQ9C091 1923 aaPredicted RBP13.41□□□□□ -0.26
COL8A1-202ENST00000273342 ICAM1P05362 532 aa13.41□□□□□ -0.26
COL8A1-202ENST00000273342 KRT19P08727 400 aa13.41□□□□□ -0.26
COL8A1-202ENST00000273342 SNRPAP09012 282 aaKnown RBP13.41□□□□□ -0.26
COL8A1-202ENST00000273342 CD1EP15812 388 aa13.41□□□□□ -0.26
COL8A1-202ENST00000273342 GARTP22102 1010 aa13.41□□□□□ -0.26
COL8A1-202ENST00000273342 CRABP2P29373 138 aa13.41□□□□□ -0.26
COL8A1-202ENST00000273342 CDH6P55285 790 aa13.41□□□□□ -0.26
COL8A1-202ENST00000273342 PRKCEQ02156 737 aa13.41□□□□□ -0.26
COL8A1-202ENST00000273342 MSLNQ13421 630 aaPredicted RBP13.41□□□□□ -0.26
COL8A1-202ENST00000273342 STRIP1Q5VSL9 837 aa13.41□□□□□ -0.26
COL8A1-202ENST00000273342 HIC2Q96JB3 615 aa13.41□□□□□ -0.26
COL8A1-202ENST00000273342 CCDC106Q9BWC9 280 aa13.41□□□□□ -0.26
COL8A1-202ENST00000273342 PPCSQ9HAB8 311 aa13.41□□□□□ -0.26
COL8A1-202ENST00000273342 DDX56Q9NY93 547 aaKnown RBP13.41□□□□□ -0.26
COL8A1-202ENST00000273342 CYTH4Q9UIA0 394 aa13.41□□□□□ -0.26
COL8A1-202ENST00000273342 SOX13Q9UN79 622 aa13.41□□□□□ -0.26
COL8A1-202ENST00000273342 HBS1LQ9Y450 684 aaKnown RBP13.41□□□□□ -0.26
COL8A1-202ENST00000273342 F8W8V4 182 aa13.41□□□□□ -0.26
COL8A1-202ENST00000273342 RAG1P15918 1043 aa13.41□□□□□ -0.26
COL8A1-202ENST00000273342 NPR1P16066 1061 aa13.41□□□□□ -0.26
COL8A1-202ENST00000273342 GRIA1P42261 906 aa13.41□□□□□ -0.26
COL8A1-202ENST00000273342 USP46P62068 366 aa13.41□□□□□ -0.26
COL8A1-202ENST00000273342 SLC25A11Q02978 314 aaKnown RBP13.41□□□□□ -0.26
COL8A1-202ENST00000273342 ATG16L1Q676U5 607 aa13.41□□□□□ -0.26
COL8A1-202ENST00000273342 DEFB107AQ8IZN7 70 aa13.41□□□□□ -0.26
COL8A1-202ENST00000273342 MPP5Q8N3R9 675 aa13.41□□□□□ -0.26
COL8A1-202ENST00000273342 DDX43Q9NXZ2 648 aaKnown RBP13.41□□□□□ -0.26
COL8A1-202ENST00000273342 TMOD2Q9NZR1 351 aa13.41□□□□□ -0.26
COL8A1-202ENST00000273342 TEX264Q9Y6I9 313 aa13.41□□□□□ -0.26
COL8A1-202ENST00000273342 E7ESA3 106 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 VCLP18206 1134 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 MIPP30301 263 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 ALDH1B1P30837 517 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 STIP1P31948 543 aaKnown RBP13.4□□□□□ -0.26
COL8A1-202ENST00000273342 ROR1Q01973 937 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 BBS12Q6ZW61 710 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 SAMD3Q8N6K7 520 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 RNF148Q8N7C7 305 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 DEPTORQ8TB45 409 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 PIP4K2CQ8TBX8 421 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 NAT14Q8WUY8 206 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 MOCOSQ96EN8 888 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms