RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 C1QAP02745 245 aa28.59■■■□□ 2.17
CBX4-201ENST00000269397 YWHAEP62258 255 aaKnown RBP28.59■■■□□ 2.17
CBX4-201ENST00000269397 ARHGAP8P85298 464 aa28.59■■■□□ 2.17
CBX4-201ENST00000269397 DUOXA2Q1HG44 320 aa28.59■■■□□ 2.17
CBX4-201ENST00000269397 XRRA1Q6P2D8 792 aa28.59■■■□□ 2.17
CBX4-201ENST00000269397 NUDCD3Q8IVD9 361 aa28.59■■■□□ 2.17
CBX4-201ENST00000269397 FRMD8P1Q9BZ68 369 aaPredicted RBP28.59■■■□□ 2.17
CBX4-201ENST00000269397 KRT19P08727 400 aa28.59■■■□□ 2.17
CBX4-201ENST00000269397 ROR2Q01974 943 aaKnown RBP28.59■■■□□ 2.17
CBX4-201ENST00000269397 KRT27Q7Z3Y8 459 aa28.59■■■□□ 2.17
CBX4-201ENST00000269397 CMASQ8NFW8 434 aaPredicted RBP28.59■■■□□ 2.17
CBX4-201ENST00000269397 FGD4Q96M96 766 aa28.59■■■□□ 2.17
CBX4-201ENST00000269397 ZCWPW1Q9H0M4 648 aa28.59■■■□□ 2.17
CBX4-201ENST00000269397 PPM1HQ9ULR3 514 aa28.59■■■□□ 2.17
CBX4-201ENST00000269397 FAM189A1O60320 539 aa28.58■■■□□ 2.17
CBX4-201ENST00000269397 KRT37O76014 449 aa28.58■■■□□ 2.17
CBX4-201ENST00000269397 TRUB2O95900 331 aaKnown RBP28.58■■■□□ 2.17
CBX4-201ENST00000269397 SNRPAP09012 282 aaKnown RBP28.58■■■□□ 2.17
CBX4-201ENST00000269397 RAB27AP51159 221 aa28.58■■■□□ 2.17
CBX4-201ENST00000269397 CDO1Q16878 200 aa28.58■■■□□ 2.17
CBX4-201ENST00000269397 C1orf146Q5VVC0 180 aa28.58■■■□□ 2.17
CBX4-201ENST00000269397 PLAC1Q9HBJ0 212 aa28.58■■■□□ 2.17
CBX4-201ENST00000269397 PLA2G4CQ9UP65 541 aa28.58■■■□□ 2.17
CBX4-201ENST00000269397 KCNN4O15554 427 aa28.58■■■□□ 2.17
CBX4-201ENST00000269397 MAGEC1O60732 1142 aa28.58■■■□□ 2.17
CBX4-201ENST00000269397 RFPL1O75677 317 aa28.58■■■□□ 2.17
CBX4-201ENST00000269397 RNF8O76064 485 aa28.58■■■□□ 2.17
CBX4-201ENST00000269397 SRGAP2CP0DJJ0 459 aa28.58■■■□□ 2.17
CBX4-201ENST00000269397 MROH9Q5TGP6 573 aa28.58■■■□□ 2.17
CBX4-201ENST00000269397 ASCC2Q9H1I8 757 aaPredicted RBP28.58■■■□□ 2.17
CBX4-201ENST00000269397 ANGPTL2Q9UKU9 493 aa28.58■■■□□ 2.17
CBX4-201ENST00000269397 HEY1Q9Y5J3 304 aa28.58■■■□□ 2.17
CBX4-201ENST00000269397 KLF11O14901 512 aa28.57■■■□□ 2.16
CBX4-201ENST00000269397 APRTP07741 180 aa28.57■■■□□ 2.16
CBX4-201ENST00000269397 TSHRP16473 764 aa28.57■■■□□ 2.16
CBX4-201ENST00000269397 FKBP1CQ5VVH2 108 aa28.57■■■□□ 2.16
CBX4-201ENST00000269397 HMGXB4Q9UGU5 601 aa28.57■■■□□ 2.16
CBX4-201ENST00000269397 TRPC5Q9UL62 973 aaPredicted RBP28.57■■■□□ 2.16
CBX4-201ENST00000269397 SPECC1L-ADORA2AF8WAN1 911 aa28.57■■■□□ 2.16
CBX4-201ENST00000269397 CIB2O75838 187 aa28.57■■■□□ 2.16
CBX4-201ENST00000269397 MAP3K10Q02779 954 aa28.57■■■□□ 2.16
CBX4-201ENST00000269397 LRRC36Q1X8D7 754 aa28.57■■■□□ 2.16
CBX4-201ENST00000269397 APLFQ8IW19 511 aaPredicted RBP28.57■■■□□ 2.16
CBX4-201ENST00000269397 XYLT2Q9H1B5 865 aa28.57■■■□□ 2.16
CBX4-201ENST00000269397 TAGLN3Q9UI15 199 aa28.57■■■□□ 2.16
CBX4-201ENST00000269397 SPATA31C2B4DYI2 1134 aa28.56■■■□□ 2.16
CBX4-201ENST00000269397 ADCY3O60266 1144 aa28.56■■■□□ 2.16
CBX4-201ENST00000269397 GRAP2O75791 330 aa28.56■■■□□ 2.16
CBX4-201ENST00000269397 TM7SF2O76062 418 aa28.56■■■□□ 2.16
CBX4-201ENST00000269397 NOMO1Q15155 1222 aa28.56■■■□□ 2.16
CBX4-201ENST00000269397 PRPF31Q8WWY3 499 aaKnown RBP28.56■■■□□ 2.16
CBX4-201ENST00000269397 C7orf26Q96N11 449 aa28.56■■■□□ 2.16
CBX4-201ENST00000269397 TRIM4Q9C037 500 aa28.56■■■□□ 2.16
CBX4-201ENST00000269397 KCNG1Q9UIX4 513 aa28.56■■■□□ 2.16
CBX4-201ENST00000269397 MAFBQ9Y5Q3 323 aaPredicted RBP28.56■■■□□ 2.16
CBX4-201ENST00000269397 CSH1P0DML2 217 aa28.56■■■□□ 2.16
CBX4-201ENST00000269397 CSH2P0DML3 217 aa28.56■■■□□ 2.16
CBX4-201ENST00000269397 C15orf59Q2T9L4 293 aaPredicted RBP28.56■■■□□ 2.16
CBX4-201ENST00000269397 TRMT10BQ6PF06 316 aaKnown RBP28.56■■■□□ 2.16
CBX4-201ENST00000269397 MFN1Q8IWA4 741 aa28.56■■■□□ 2.16
CBX4-201ENST00000269397 CEP120Q8N960 986 aa28.56■■■□□ 2.16
CBX4-201ENST00000269397 TWNKQ96RR1 684 aa28.56■■■□□ 2.16
CBX4-201ENST00000269397 WWP1Q9H0M0 922 aa28.56■■■□□ 2.16
CBX4-201ENST00000269397 LYNP07948 512 aa28.56■■■□□ 2.16
CBX4-201ENST00000269397 TEX44Q53QW1 395 aa28.56■■■□□ 2.16
CBX4-201ENST00000269397 ATG16L1Q676U5 607 aa28.56■■■□□ 2.16
CBX4-201ENST00000269397 NET1Q7Z628 596 aaPredicted RBP28.56■■■□□ 2.16
CBX4-201ENST00000269397 NDUFAF2Q8N183 169 aa28.56■■■□□ 2.16
CBX4-201ENST00000269397 TUBGCP5Q96RT8 1024 aa28.56■■■□□ 2.16
CBX4-201ENST00000269397 RSAD1Q9HA92 442 aa28.56■■■□□ 2.16
CBX4-201ENST00000269397 POPDC2Q9HBU9 364 aa28.56■■■□□ 2.16
CBX4-201ENST00000269397 GPATCH2LQ9NWQ4 482 aa28.56■■■□□ 2.16
CBX4-201ENST00000269397 IL1BP01584 269 aa28.55■■■□□ 2.16
CBX4-201ENST00000269397 STIP1P31948 543 aaKnown RBP28.55■■■□□ 2.16
CBX4-201ENST00000269397 FAM102AQ5T9C2 384 aaPredicted RBP28.55■■■□□ 2.16
CBX4-201ENST00000269397 TTLL6Q8N841 843 aa28.55■■■□□ 2.16
CBX4-201ENST00000269397 FNIP1Q8TF40 1166 aa28.55■■■□□ 2.16
CBX4-201ENST00000269397 MTBPQ96DY7 904 aa28.55■■■□□ 2.16
CBX4-201ENST00000269397 GBP5Q96PP8 586 aa28.55■■■□□ 2.16
CBX4-201ENST00000269397 MMP19Q99542 508 aa28.55■■■□□ 2.16
CBX4-201ENST00000269397 NDE1Q9NXR1 346 aa28.55■■■□□ 2.16
CBX4-201ENST00000269397 GSTA2P09210 222 aa28.55■■■□□ 2.16
CBX4-201ENST00000269397 ANGEL2Q5VTE6 544 aaKnown RBP28.55■■■□□ 2.16
CBX4-201ENST00000269397 FAM91A1Q658Y4 838 aa28.55■■■□□ 2.16
CBX4-201ENST00000269397 CAND1Q86VP6 1230 aaKnown RBP28.55■■■□□ 2.16
CBX4-201ENST00000269397 CRLF3Q8IUI8 442 aa28.55■■■□□ 2.16
CBX4-201ENST00000269397 CCDC33Q8N5R6 958 aa28.55■■■□□ 2.16
CBX4-201ENST00000269397 GSTCDQ8NEC7 633 aa28.55■■■□□ 2.16
CBX4-201ENST00000269397 CCDC106Q9BWC9 280 aa28.55■■■□□ 2.16
CBX4-201ENST00000269397 USP29Q9HBJ7 922 aa28.55■■■□□ 2.16
CBX4-201ENST00000269397 CPSF2Q9P2I0 782 aaKnown RBP28.55■■■□□ 2.16
CBX4-201ENST00000269397 FZD1Q9UP38 647 aa28.55■■■□□ 2.16
CBX4-201ENST00000269397 MAD1L1Q9Y6D9 718 aa28.55■■■□□ 2.16
CBX4-201ENST00000269397 COL4A5P29400 1685 aa28.54■■■□□ 2.16
CBX4-201ENST00000269397 MSCO60682 206 aa28.54■■■□□ 2.16
CBX4-201ENST00000269397 RBL1P28749 1068 aa28.54■■■□□ 2.16
CBX4-201ENST00000269397 ACTR3P61158 418 aa28.54■■■□□ 2.16
CBX4-201ENST00000269397 DSG1Q02413 1049 aa28.54■■■□□ 2.16
CBX4-201ENST00000269397 MYLK4Q86YV6 388 aaPredicted RBP28.54■■■□□ 2.16
CBX4-201ENST00000269397 TRAF3IP1Q8TDR0 691 aaPredicted RBP28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms