RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 EXOC1LA0A1B0GW35 172 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 SLC12A8A0AV02 714 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 BAIAP3O94812 1187 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 RASGRP1O95267 797 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 ECEL1O95672 775 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 INSRRP14616 1297 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 NAMPTP43490 491 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 Q4G0T1 1027 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 MPZL3Q6UWV2 235 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 ADGRF2Q8IZF7 708 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 SYTL5Q8TDW5 730 aaPredicted RBP8.1□□□□□ -1.11
USP3-201ENST00000268049 C7orf43Q8WVR3 580 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 RPRD1AQ96P16 312 aaPredicted RBP8.1□□□□□ -1.11
USP3-201ENST00000268049 GTPBP2Q9BX10 602 aaKnown RBP8.1□□□□□ -1.11
USP3-201ENST00000268049 IL25Q9H293 177 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 SARS2Q9NP81 518 aaKnown RBP8.1□□□□□ -1.11
USP3-201ENST00000268049 CRLS1Q9UJA2 301 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 KIAA1257Q9ULG3 409 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 NFASCO94856 1347 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 SALL3Q9BXA9 1300 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 POTEFA5A3E0 1075 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 E7ENQ6 273 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 CTIFO43310 598 aaKnown RBP8.1□□□□□ -1.11
USP3-201ENST00000268049 TSPAN9O75954 239 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 POTEIP0CG38 1075 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 SMIM10L2AP0DMW4 78 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 SMIM10L2BP0DMW5 78 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 CASP2P42575 452 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 SCNN1BP51168 640 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 LRRC41Q15345 812 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 SEC23AQ15436 765 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 FBXL19Q6PCT2 694 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 POTEGQ6S5H5 508 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 POTEEQ6S8J3 1075 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 C16orf59Q7L2K0 433 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 GSPT2Q8IYD1 628 aaKnown RBP8.1□□□□□ -1.11
USP3-201ENST00000268049 CHPFQ8IZ52 775 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 TMEM86AQ8N2M4 240 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 AGGF1Q8N302 714 aaeCLIP8.1□□□□□ -1.11
USP3-201ENST00000268049 MAML3Q96JK9 1138 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 ELOVL4Q9GZR5 314 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 PCMTD2Q9NV79 361 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 NDUFA13Q9P0J0 144 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 ADAM22Q9P0K1 906 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 A0A087WWV3 80 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 OR6C75A6NL08 312 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 PDZK1P1A8MUH7 402 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 SKAP2O75563 359 aaPredicted RBP8.1□□□□□ -1.11
USP3-201ENST00000268049 MDH1P40925 334 aaKnown RBP8.1□□□□□ -1.11
USP3-201ENST00000268049 ANXA11P50995 505 aaKnown RBP8.1□□□□□ -1.11
USP3-201ENST00000268049 VAMP7P51809 220 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 MAN2A1Q16706 1144 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 AARS2Q5JTZ9 985 aaKnown RBP8.1□□□□□ -1.11
USP3-201ENST00000268049 ZBTB41Q5SVQ8 909 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 TATDN1Q6P1N9 297 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 SLC26A7Q8TE54 656 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 KLK14Q9P0G3 267 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 ARHGAP26Q9UNA1 814 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 RUVBL2Q9Y230 463 aaKnown RBP8.1□□□□□ -1.11
USP3-201ENST00000268049 CAB39Q9Y376 341 aaPredicted RBP8.1□□□□□ -1.11
USP3-201ENST00000268049 TAF6LQ9Y6J9 622 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 NDUFA10O95299 355 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 CNPP09543 421 aaKnown RBP8.1□□□□□ -1.11
USP3-201ENST00000268049 UBTFL6P0CB48 400 aaPredicted RBP8.1□□□□□ -1.11
USP3-201ENST00000268049 RBMS1P29558 406 aaKnown RBP8.1□□□□□ -1.11
USP3-201ENST00000268049 NCKAP1LP55160 1127 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 RHOAP61586 193 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 PKN1Q16512 942 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 C10orf76Q5T2E6 689 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 RINLQ6ZS11 566 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 NRSN1Q8IZ57 195 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 KLHL23Q8NBE8 558 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 PPHLN1Q8NEY8 458 aaKnown RBP8.1□□□□□ -1.11
USP3-201ENST00000268049 SETD7Q8WTS6 366 aaKnown RBP8.1□□□□□ -1.11
USP3-201ENST00000268049 RAPGEF5Q92565 580 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 P2RX5Q93086 422 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 GRAMD1AQ96CP6 724 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 NR1H4Q96RI1 486 aaPredicted RBP8.1□□□□□ -1.11
USP3-201ENST00000268049 CCDC90BQ9GZT6 254 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 OSGEPL1Q9H4B0 414 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 RIOX1Q9H6W3 641 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 SMYD2Q9NRG4 433 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 NMRK1Q9NWW6 199 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.1□□□□□ -1.11
USP3-201ENST00000268049 ADGRA2Q96PE1 1338 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 RNF103-CHMP3A0A140T963 221 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 FOXD2O60548 495 aaPredicted RBP8.09□□□□□ -1.11
USP3-201ENST00000268049 TOM1L1O75674 476 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 LGALS2P05162 132 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 PDGFRBP09619 1106 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 DARSP14868 501 aaKnown RBP8.09□□□□□ -1.11
USP3-201ENST00000268049 ACADSP16219 412 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 GNA15P30679 374 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 DEFA1P59665 94 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 DEFA3P59666 94 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 TBL3Q12788 808 aaKnown RBP8.09□□□□□ -1.11
USP3-201ENST00000268049 PDIA5Q14554 519 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 CNGA3Q16281 694 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 FAM102AQ5T9C2 384 aaPredicted RBP8.09□□□□□ -1.11
USP3-201ENST00000268049 ADCK1Q86TW2 530 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms