RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 USP6NLQ92738 828 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 APOPT1Q96IL0 206 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 RSRC1Q96IZ7 334 aaKnown RBP12.97□□□□□ -0.33
BEST3-201ENST00000266661 RNF157Q96PX1 679 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 KLF6Q99612 283 aaPredicted RBP12.97□□□□□ -0.33
BEST3-201ENST00000266661 RPF1Q9H9Y2 349 aaKnown RBP12.97□□□□□ -0.33
BEST3-201ENST00000266661 BATF3Q9NR55 127 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 ASNSD1Q9NWL6 643 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 TTLL3Q9Y4R7 772 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 CASP8AP2Q9UKL3 1982 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 DOCK3Q8IZD9 2030 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 KBTBD13C9JR72 458 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 GOLGA8RI6L899 631 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 KLF11O14901 512 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 SPAG6O75602 509 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 RNF8O76064 485 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 CYP2C8P10632 490 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 EPHB2P29323 1055 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 GTF2A2P52657 109 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 CLNS1AP54105 237 aaKnown RBP12.97□□□□□ -0.33
BEST3-201ENST00000266661 ROR1Q01973 937 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 KBTBD12Q3ZCT8 623 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 CMPK2Q5EBM0 449 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 FAM91A1Q658Y4 838 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 PRPF39Q86UA1 669 aaKnown RBP12.97□□□□□ -0.33
BEST3-201ENST00000266661 LRRC6Q86X45 466 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 TAB3Q8N5C8 712 aaPredicted RBP12.97□□□□□ -0.33
BEST3-201ENST00000266661 PQLC3Q8N755 202 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 LINC01465Q8N7H1 131 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 STK32AQ8WU08 396 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 TRAPPC12Q8WVT3 735 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 HSPH1Q92598 858 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 KHSRPQ92945 711 aaKnown RBP eCLIP12.97□□□□□ -0.33
BEST3-201ENST00000266661 SKA1Q96BD8 255 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 IFT122Q9HBG6 1241 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 DONSONQ9NYP3 566 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 ZFP69BQ9UJL9 534 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 THSD7BQ9C0I4 1608 aa12.97□□□□□ -0.33
BEST3-201ENST00000266661 DNAJC25-GNG10A0A024R161 153 aa12.96□□□□□ -0.33
BEST3-201ENST00000266661 IQANK1A0A1B0GTG1 560 aa12.96□□□□□ -0.33
BEST3-201ENST00000266661 WDR91A4D1P6 747 aa12.96□□□□□ -0.33
BEST3-201ENST00000266661 DPYSL4O14531 572 aa12.96□□□□□ -0.33
BEST3-201ENST00000266661 CXCL11O14625 94 aa12.96□□□□□ -0.33
BEST3-201ENST00000266661 TRPA1O75762 1119 aa12.96□□□□□ -0.33
BEST3-201ENST00000266661 STAU1O95793 577 aaKnown RBP12.96□□□□□ -0.33
BEST3-201ENST00000266661 MT-ND3P03897 115 aa12.96□□□□□ -0.33
BEST3-201ENST00000266661 ITGB3P05106 788 aa12.96□□□□□ -0.33
BEST3-201ENST00000266661 DLDP09622 509 aaKnown RBP12.96□□□□□ -0.33
BEST3-201ENST00000266661 STAG3L1P0CL83 205 aa12.96□□□□□ -0.33
BEST3-201ENST00000266661 TROVE2P10155 538 aaKnown RBP eCLIP12.96□□□□□ -0.33
BEST3-201ENST00000266661 MCF2P10911 925 aa12.96□□□□□ -0.33
BEST3-201ENST00000266661 GPD1P21695 349 aa12.96□□□□□ -0.33
BEST3-201ENST00000266661 RASSF2P50749 326 aa12.96□□□□□ -0.33
BEST3-201ENST00000266661 YWHAZP63104 245 aaKnown RBP12.96□□□□□ -0.33
BEST3-201ENST00000266661 ZNF200P98182 395 aaPredicted RBP12.96□□□□□ -0.33
BEST3-201ENST00000266661 PTK7Q13308 1070 aa12.96□□□□□ -0.33
BEST3-201ENST00000266661 MTM1Q13496 603 aa12.96□□□□□ -0.33
BEST3-201ENST00000266661 FAM47CQ5HY64 1035 aa12.96□□□□□ -0.33
BEST3-201ENST00000266661 FYB2Q5VWT5 728 aa12.96□□□□□ -0.33
BEST3-201ENST00000266661 JADE1Q6IE81 842 aa12.96□□□□□ -0.33
BEST3-201ENST00000266661 LCLAT1Q6UWP7 414 aa12.96□□□□□ -0.33
BEST3-201ENST00000266661 BZW1Q7L1Q6 419 aaKnown RBP12.96□□□□□ -0.33
BEST3-201ENST00000266661 EEPD1Q7L9B9 569 aa12.96□□□□□ -0.33
BEST3-201ENST00000266661 IFNL1Q8IU54 200 aa12.96□□□□□ -0.33
BEST3-201ENST00000266661 PLD5Q8N7P1 536 aa12.96□□□□□ -0.33
BEST3-201ENST00000266661 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.96□□□□□ -0.33
BEST3-201ENST00000266661 CFAP61Q8NHU2 1237 aa12.96□□□□□ -0.33
BEST3-201ENST00000266661 RXFP2Q8WXD0 754 aa12.96□□□□□ -0.33
BEST3-201ENST00000266661 PIWIL1Q96J94 861 aaKnown RBP12.96□□□□□ -0.33
BEST3-201ENST00000266661 ZNF668Q96K58 619 aaPredicted RBP12.96□□□□□ -0.33
BEST3-201ENST00000266661 ASCC2Q9H1I8 757 aaPredicted RBP12.96□□□□□ -0.33
BEST3-201ENST00000266661 FAM124BQ9H5Z6 455 aaPredicted RBP12.96□□□□□ -0.33
BEST3-201ENST00000266661 DENND2DQ9H6A0 471 aaPredicted RBP12.96□□□□□ -0.33
BEST3-201ENST00000266661 ZSWIM8A7E2V4 1837 aa12.96□□□□□ -0.33
BEST3-201ENST00000266661 INO80B-WBP1J3KQ70 363 aa12.95□□□□□ -0.34
BEST3-201ENST00000266661 M0QYV0 167 aa12.95□□□□□ -0.34
BEST3-201ENST00000266661 LPXNO60711 386 aa12.95□□□□□ -0.34
BEST3-201ENST00000266661 C22orf31O95567 290 aa12.95□□□□□ -0.34
BEST3-201ENST00000266661 KRT19P08727 400 aa12.95□□□□□ -0.34
BEST3-201ENST00000266661 PRKCHP24723 683 aa12.95□□□□□ -0.34
BEST3-201ENST00000266661 CCNFP41002 786 aa12.95□□□□□ -0.34
BEST3-201ENST00000266661 TM4SF4P48230 202 aa12.95□□□□□ -0.34
BEST3-201ENST00000266661 SLC26A2P50443 739 aa12.95□□□□□ -0.34
BEST3-201ENST00000266661 BASP1P80723 227 aaKnown RBP12.95□□□□□ -0.34
BEST3-201ENST00000266661 OVGP1Q12889 678 aa12.95□□□□□ -0.34
BEST3-201ENST00000266661 TFDP2Q14188 446 aa12.95□□□□□ -0.34
BEST3-201ENST00000266661 SLC10A6Q3KNW5 377 aa12.95□□□□□ -0.34
BEST3-201ENST00000266661 HSF5Q4G112 596 aaPredicted RBP12.95□□□□□ -0.34
BEST3-201ENST00000266661 PKDCCQ504Y2 493 aa12.95□□□□□ -0.34
BEST3-201ENST00000266661 SLC9A4Q6AI14 798 aa12.95□□□□□ -0.34
BEST3-201ENST00000266661 ZNF449Q6P9G9 518 aa12.95□□□□□ -0.34
BEST3-201ENST00000266661 DARS2Q6PI48 645 aaKnown RBP12.95□□□□□ -0.34
BEST3-201ENST00000266661 CDHR3Q6ZTQ4 885 aa12.95□□□□□ -0.34
BEST3-201ENST00000266661 CAND1Q86VP6 1230 aaKnown RBP12.95□□□□□ -0.34
BEST3-201ENST00000266661 ZBTB10Q96DT7 871 aa12.95□□□□□ -0.34
BEST3-201ENST00000266661 NLRP4Q96MN2 994 aa12.95□□□□□ -0.34
BEST3-201ENST00000266661 ADPGKQ9BRR6 497 aa12.95□□□□□ -0.34
BEST3-201ENST00000266661 CALN1Q9BXU9 219 aa12.95□□□□□ -0.34
BEST3-201ENST00000266661 CADM1Q9BY67 442 aaKnown RBP12.95□□□□□ -0.34
BEST3-201ENST00000266661 FRMD8Q9BZ67 464 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms