RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 FGFR1P11362 822 aa15.04■□□□□ -0
PDLIM2-201ENST00000265810 NNMTP40261 264 aa15.04■□□□□ -0
PDLIM2-201ENST00000265810 IRX4P78413 519 aa15.04■□□□□ -0
PDLIM2-201ENST00000265810 KLHL38Q2WGJ6 581 aa15.04■□□□□ -0
PDLIM2-201ENST00000265810 TFAP2BQ92481 460 aa15.04■□□□□ -0
PDLIM2-201ENST00000265810 MRPS31Q92665 395 aaKnown RBP15.04■□□□□ -0
PDLIM2-201ENST00000265810 ZNF558Q96NG5 402 aa15.04■□□□□ -0
PDLIM2-201ENST00000265810 CPXM1Q96SM3 734 aa15.04■□□□□ -0
PDLIM2-201ENST00000265810 TLR8Q9NR97 1041 aaKnown RBP15.04■□□□□ -0
PDLIM2-201ENST00000265810 CCDC78A2IDD5 438 aa15.04■□□□□ -0
PDLIM2-201ENST00000265810 MYADML2A6NDP7 307 aa15.04■□□□□ -0
PDLIM2-201ENST00000265810 MBL2P11226 248 aaPredicted RBP15.04■□□□□ -0
PDLIM2-201ENST00000265810 SLC11A2P49281 568 aa15.04■□□□□ -0
PDLIM2-201ENST00000265810 EPHB3P54753 998 aa15.04■□□□□ -0
PDLIM2-201ENST00000265810 GDAP1Q8TB36 358 aa15.04■□□□□ -0
PDLIM2-201ENST00000265810 B3GNT5Q9BYG0 378 aa15.04■□□□□ -0
PDLIM2-201ENST00000265810 MUC3BQ9H195 1237 aa15.04■□□□□ -0
PDLIM2-201ENST00000265810 SALL4Q9UJQ4 1053 aa15.04■□□□□ -0
PDLIM2-201ENST00000265810 RASSF10A6NK89 507 aa15.04■□□□□ -0
PDLIM2-201ENST00000265810 STAMBPO95630 424 aa15.04■□□□□ -0
PDLIM2-201ENST00000265810 VSIG1Q86XK7 387 aa15.04■□□□□ -0
PDLIM2-201ENST00000265810 SKA2Q8WVK7 121 aaPredicted RBP15.04■□□□□ -0
PDLIM2-201ENST00000265810 RMDN1Q96DB5 314 aa15.04■□□□□ -0
PDLIM2-201ENST00000265810 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.04■□□□□ -0
PDLIM2-201ENST00000265810 PMM2O15305 246 aa15.03■□□□□ -0
PDLIM2-201ENST00000265810 PAMP19021 973 aa15.03■□□□□ -0
PDLIM2-201ENST00000265810 CCR1P32246 355 aa15.03■□□□□ -0
PDLIM2-201ENST00000265810 ANO4Q32M45 955 aa15.03■□□□□ -0
PDLIM2-201ENST00000265810 SLC4A11Q8NBS3 891 aa15.03■□□□□ -0
PDLIM2-201ENST00000265810 RILPQ96NA2 401 aa15.03■□□□□ -0
PDLIM2-201ENST00000265810 NOCTQ9UK39 431 aaKnown RBP15.03■□□□□ -0
PDLIM2-201ENST00000265810 MRPL42Q9Y6G3 142 aaKnown RBP15.03■□□□□ -0
PDLIM2-201ENST00000265810 KRT38O76015 456 aa15.03■□□□□ -0
PDLIM2-201ENST00000265810 LCA5LO95447 670 aa15.03■□□□□ -0
PDLIM2-201ENST00000265810 TROVE2P10155 538 aaKnown RBP eCLIP15.03■□□□□ -0
PDLIM2-201ENST00000265810 CTCFP49711 727 aaPredicted RBP15.03■□□□□ -0
PDLIM2-201ENST00000265810 ZNF143P52747 638 aaPredicted RBP15.03■□□□□ -0
PDLIM2-201ENST00000265810 ACAP1Q15027 740 aa15.03■□□□□ -0
PDLIM2-201ENST00000265810 LCLAT1Q6UWP7 414 aa15.03■□□□□ -0
PDLIM2-201ENST00000265810 CRELD2Q6UXH1 353 aaPredicted RBP15.03■□□□□ -0
PDLIM2-201ENST00000265810 OR6P1Q8NGX9 317 aa15.03■□□□□ -0
PDLIM2-201ENST00000265810 FBXO25Q8TCJ0 367 aa15.03■□□□□ -0
PDLIM2-201ENST00000265810 RAPGEF5Q92565 580 aa15.03■□□□□ -0
PDLIM2-201ENST00000265810 L1RE1Q9UN81 338 aa15.03■□□□□ -0
PDLIM2-201ENST00000265810 CHMP2BQ9UQN3 213 aa15.03■□□□□ -0
PDLIM2-201ENST00000265810 STYXL1Q9Y6J8 313 aa15.03■□□□□ -0
PDLIM2-201ENST00000265810 NOS2P35228 1153 aa15.03■□□□□ -0
PDLIM2-201ENST00000265810 ETFBP38117 255 aa15.03■□□□□ -0
PDLIM2-201ENST00000265810 TM4SF4P48230 202 aa15.03■□□□□ -0
PDLIM2-201ENST00000265810 TLE2Q04725 743 aa15.03■□□□□ -0
PDLIM2-201ENST00000265810 SDHAF4Q5VUM1 108 aa15.03■□□□□ -0
PDLIM2-201ENST00000265810 WDR93Q6P2C0 686 aa15.03■□□□□ -0
PDLIM2-201ENST00000265810 LHX5Q9H2C1 402 aa15.03■□□□□ -0
PDLIM2-201ENST00000265810 CACNG4Q9UBN1 327 aa15.03■□□□□ -0
PDLIM2-201ENST00000265810 SLC27A5Q9Y2P5 690 aa15.03■□□□□ -0
PDLIM2-201ENST00000265810 COL11A2P13942 1736 aaPredicted RBP15.02■□□□□ -0
PDLIM2-201ENST00000265810 CYP3A5P20815 502 aa15.02■□□□□ -0
PDLIM2-201ENST00000265810 AMPD1P23109 780 aa15.02■□□□□ -0
PDLIM2-201ENST00000265810 KLRC2P26717 231 aa15.02■□□□□ -0
PDLIM2-201ENST00000265810 TUFMP49411 452 aaKnown RBP15.02■□□□□ -0
PDLIM2-201ENST00000265810 CCDC38Q502W7 563 aa15.02■□□□□ -0
PDLIM2-201ENST00000265810 FAM35AQ86V20 835 aa15.02■□□□□ -0
PDLIM2-201ENST00000265810 ZC3H3Q8IXZ2 948 aaKnown RBP15.02■□□□□ -0
PDLIM2-201ENST00000265810 JOSD2Q8TAC2 188 aa15.02■□□□□ -0
PDLIM2-201ENST00000265810 FBF1Q8TES7 1133 aa15.02■□□□□ -0
PDLIM2-201ENST00000265810 PPP4R1Q8TF05 950 aa15.02■□□□□ -0
PDLIM2-201ENST00000265810 DUSP16Q9BY84 665 aa15.02■□□□□ -0
PDLIM2-201ENST00000265810 ANKZF1Q9H8Y5 726 aa15.02■□□□□ -0
PDLIM2-201ENST00000265810 RRN3Q9NYV6 651 aa15.02■□□□□ -0
PDLIM2-201ENST00000265810 CES2O00748 559 aa15.02■□□□□ -0
PDLIM2-201ENST00000265810 CHRNB2P17787 502 aa15.02■□□□□ -0
PDLIM2-201ENST00000265810 PCSK7Q16549 785 aa15.02■□□□□ -0
PDLIM2-201ENST00000265810 GKAP1Q5VSY0 366 aaPredicted RBP15.02■□□□□ -0
PDLIM2-201ENST00000265810 ANKRD20A3Q5VUR7 823 aa15.02■□□□□ -0
PDLIM2-201ENST00000265810 ARHGEF2Q92974 986 aaKnown RBP15.02■□□□□ -0
PDLIM2-201ENST00000265810 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.02■□□□□ -0
PDLIM2-201ENST00000265810 UNC93B1Q9H1C4 597 aa15.02■□□□□ -0
PDLIM2-201ENST00000265810 CNOT10Q9H9A5 744 aaKnown RBP15.02■□□□□ -0
PDLIM2-201ENST00000265810 PDLIM7Q9NR12 457 aa15.02■□□□□ -0
PDLIM2-201ENST00000265810 ZC3H7BQ9UGR2 993 aaKnown RBP15.02■□□□□ -0
PDLIM2-201ENST00000265810 IGKV6-21A0A0C4DH24 114 aa15.02□□□□□ -0.01
PDLIM2-201ENST00000265810 ERBB2P04626 1255 aa15.02□□□□□ -0.01
PDLIM2-201ENST00000265810 MAGEA4P43358 317 aa15.02□□□□□ -0.01
PDLIM2-201ENST00000265810 MLXIPLQ9NP71 852 aa15.02□□□□□ -0.01
PDLIM2-201ENST00000265810 LAMB1P07942 1786 aa15.02□□□□□ -0.01
PDLIM2-201ENST00000265810 OR4Q2P0C623 313 aa15.02□□□□□ -0.01
PDLIM2-201ENST00000265810 CCL5P13501 91 aa15.02□□□□□ -0.01
PDLIM2-201ENST00000265810 TRMT10CQ7L0Y3 403 aaKnown RBP15.02□□□□□ -0.01
PDLIM2-201ENST00000265810 PPIL6Q8IXY8 311 aa15.02□□□□□ -0.01
PDLIM2-201ENST00000265810 KATNAL2Q8IYT4 538 aa15.02□□□□□ -0.01
PDLIM2-201ENST00000265810 CACNA2D3Q8IZS8 1091 aa15.02□□□□□ -0.01
PDLIM2-201ENST00000265810 WNT8BQ93098 351 aa15.02□□□□□ -0.01
PDLIM2-201ENST00000265810 BORCS6Q96GS4 357 aa15.02□□□□□ -0.01
PDLIM2-201ENST00000265810 NUDCD1Q96RS6 583 aa15.02□□□□□ -0.01
PDLIM2-201ENST00000265810 DCLK3Q9C098 648 aa15.02□□□□□ -0.01
PDLIM2-201ENST00000265810 DPEP3Q9H4B8 488 aa15.02□□□□□ -0.01
PDLIM2-201ENST00000265810 SMPD4Q9NXE4 827 aa15.02□□□□□ -0.01
PDLIM2-201ENST00000265810 F5H5T6 163 aa15.01□□□□□ -0.01
PDLIM2-201ENST00000265810 CYP2C18P33260 490 aa15.01□□□□□ -0.01
PDLIM2-201ENST00000265810 SKIV2LQ15477 1246 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms