RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 LILRA2Q8N149 483 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 HELQQ8TDG4 1101 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 GRK7Q8WTQ7 553 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 ATP6V0A1Q93050 837 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 PLEKHA8Q96JA3 519 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 VPS50Q96JG6 964 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 GLIS2Q9BZE0 524 aaPredicted RBP9.12□□□□□ -0.95
VAPB-201ENST00000265619 ANLNQ9NQW6 1124 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.12□□□□□ -0.95
VAPB-201ENST00000265619 GNEQ9Y223 722 aaKnown RBP9.12□□□□□ -0.95
VAPB-201ENST00000265619 POMPQ9Y244 141 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 SF3B1O75533 1304 aaKnown RBP eCLIP9.12□□□□□ -0.958e-6■■■■■ 107
VAPB-201ENST00000265619 SGPL1O95470 568 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 NR3C1P04150 777 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 ETV4P43268 484 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 GMPSP49915 693 aaPredicted RBP9.11□□□□□ -0.95
VAPB-201ENST00000265619 CDK9P50750 372 aaKnown RBP9.11□□□□□ -0.95
VAPB-201ENST00000265619 FXR2P51116 673 aaKnown RBP eCLIP9.11□□□□□ -0.95
VAPB-201ENST00000265619 AQP5P55064 265 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 CNGA3Q16281 694 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 SYCP2LQ5T4T6 812 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 TRIM72Q6ZMU5 477 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 UTS2BQ765I0 119 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 ARHGEF19Q8IW93 802 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 ADGRF4Q8IZF3 695 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 ZNF564Q8TBZ8 553 aaPredicted RBP9.11□□□□□ -0.95
VAPB-201ENST00000265619 ZFRQ96KR1 1074 aaKnown RBP9.11□□□□□ -0.95
VAPB-201ENST00000265619 C10orf88Q9H8K7 445 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 NCKIPSDQ9NZQ3 722 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 PLOD2O00469 737 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 CASQ2O14958 399 aaPredicted RBP9.11□□□□□ -0.95
VAPB-201ENST00000265619 CDH3P22223 829 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 TUFMP49411 452 aaKnown RBP9.11□□□□□ -0.95
VAPB-201ENST00000265619 GPC5P78333 572 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 CCNG2Q16589 344 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 AAGABQ6PD74 315 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 POTEGQ6S5H5 508 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 TDRPQ86YL5 185 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 WDR75Q8IWA0 830 aaKnown RBP9.11□□□□□ -0.95
VAPB-201ENST00000265619 DCPSQ96C86 337 aaKnown RBP9.11□□□□□ -0.95
VAPB-201ENST00000265619 BTBD9Q96Q07 612 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 WNT8AQ9H1J5 351 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 BHMT2Q9H2M3 363 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 C17orf75Q9HAS0 396 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 KLHL11Q9NVR0 708 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 RABGEF1Q9UJ41 708 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 F5H6K3 240 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 TNFAIP8O95379 198 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 TOP3BO95985 862 aaKnown RBP9.11□□□□□ -0.95
VAPB-201ENST00000265619 RALAP11233 206 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 KLRC2P26717 231 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 NR1H2P55055 460 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 PDAP1Q13442 181 aaKnown RBP9.11□□□□□ -0.95
VAPB-201ENST00000265619 SEPT7Q16181 437 aaKnown RBP9.11□□□□□ -0.95
VAPB-201ENST00000265619 EDRF1Q3B7T1 1238 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 HSP90AA5PQ58FG0 334 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 MAP3K21Q5TCX8 1036 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 EGFLAMQ63HQ2 1017 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 BORAQ6PGQ7 559 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 FOXR2Q6PJQ5 311 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 ATG14Q6ZNE5 492 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 SNX29P2Q8IUI4 249 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 RHOT2Q8IXI1 618 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 AHI1Q8N157 1196 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 ZCCHC9Q8N567 271 aaKnown RBP9.11□□□□□ -0.95
VAPB-201ENST00000265619 TTC13Q8NBP0 860 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 GSDMBQ8TAX9 411 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 CDH22Q9UJ99 828 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 N6AMT1Q9Y5N5 214 aa9.11□□□□□ -0.95
VAPB-201ENST00000265619 DENND3A2RUS2 1198 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 SPDYE2BA6NHP3 402 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 PIK3CDO00329 1044 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 AQP9O43315 295 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 ABHD2P08910 425 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 SPDYE6P0CI01 402 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 FDX1P10109 184 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 TSPY1Q01534 308 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 KNOP1Q1ED39 458 aaKnown RBP9.1□□□□□ -0.95
VAPB-201ENST00000265619 ZCCHC23Q6ZST2 131 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 KRT25Q7Z3Z0 450 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 BTLAQ7Z6A9 289 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 NOP9Q86U38 636 aaKnown RBP9.1□□□□□ -0.95
VAPB-201ENST00000265619 SIX5Q8N196 739 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 REXO1Q8N1G1 1221 aaKnown RBP9.1□□□□□ -0.95
VAPB-201ENST00000265619 RAB3IL1Q8TBN0 382 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 NAA50Q9GZZ1 169 aaKnown RBP9.1□□□□□ -0.95
VAPB-201ENST00000265619 EHD1Q9H4M9 534 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 C6orf50Q9HD87 102 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 FBXO28Q9NVF7 368 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 PSMC3IPQ9P2W1 217 aaPredicted RBP9.1□□□□□ -0.95
VAPB-201ENST00000265619 PCDHA1Q9Y5I3 950 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 MED24O75448 989 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 FAM155BO75949 473 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 FBXO21O94952 628 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 CFBP00751 764 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 PTPN1P18031 435 aaKnown RBP9.1□□□□□ -0.95
VAPB-201ENST00000265619 ANXA13P27216 316 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 GNA11P29992 359 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 MAPK10P53779 464 aa9.1□□□□□ -0.95
VAPB-201ENST00000265619 HADHBP55084 474 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms