RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 NFE2Q16621 373 aaPredicted RBP9.72□□□□□ -0.85
SSR3-201ENST00000265044 ZC3H12AQ5D1E8 599 aaKnown RBP9.72□□□□□ -0.85
SSR3-201ENST00000265044 SDHAF4Q5VUM1 108 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 BZW1Q7L1Q6 419 aaKnown RBP9.72□□□□□ -0.85
SSR3-201ENST00000265044 PRUNE1Q86TP1 453 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 OSTM1Q86WC4 334 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 C9orf72Q96LT7 481 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 TRAIPQ9BWF2 469 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 SLC12A6Q9UHW9 1150 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 MRPL42Q9Y6G3 142 aaKnown RBP9.72□□□□□ -0.85
SSR3-201ENST00000265044 LOC285556D6RIA3 1793 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 MYO7AQ13402 2215 aa9.71□□□□□ -0.85
SSR3-201ENST00000265044 PRRC2BQ5JSZ5 2229 aaKnown RBP9.71□□□□□ -0.85
SSR3-201ENST00000265044 FSCN2O14926 492 aa9.71□□□□□ -0.85
SSR3-201ENST00000265044 ITIH2P19823 946 aa9.71□□□□□ -0.85
SSR3-201ENST00000265044 COPS2P61201 443 aa9.71□□□□□ -0.85
SSR3-201ENST00000265044 ACAP1Q15027 740 aa9.71□□□□□ -0.85
SSR3-201ENST00000265044 GDAP2Q9NXN4 497 aa9.71□□□□□ -0.85
SSR3-201ENST00000265044 R3HDM2Q9Y2K5 976 aaKnown RBP9.71□□□□□ -0.85
SSR3-201ENST00000265044 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.71□□□□□ -0.85
SSR3-201ENST00000265044 EEF2KO00418 725 aaKnown RBP9.71□□□□□ -0.85
SSR3-201ENST00000265044 XPO1O14980 1071 aaKnown RBP9.71□□□□□ -0.85
SSR3-201ENST00000265044 FBXO21O94952 628 aa9.71□□□□□ -0.85
SSR3-201ENST00000265044 EOMESO95936 686 aa9.71□□□□□ -0.85
SSR3-201ENST00000265044 LTFP02788 710 aa9.71□□□□□ -0.85
SSR3-201ENST00000265044 RPL21P46778 160 aaKnown RBP9.71□□□□□ -0.85
SSR3-201ENST00000265044 PLA2G4AP47712 749 aa9.71□□□□□ -0.85
SSR3-201ENST00000265044 ERMARDQ5T6L9 678 aa9.71□□□□□ -0.85
SSR3-201ENST00000265044 LRRC38Q5VT99 294 aa9.71□□□□□ -0.85
SSR3-201ENST00000265044 MIB1Q86YT6 1006 aa9.71□□□□□ -0.85
SSR3-201ENST00000265044 CRYBG2Q8N1P7 616 aa9.71□□□□□ -0.85
SSR3-201ENST00000265044 PYROXD1Q8WU10 500 aa9.71□□□□□ -0.85
SSR3-201ENST00000265044 UROC1Q96N76 676 aa9.71□□□□□ -0.85
SSR3-201ENST00000265044 ZIM3Q96PE6 472 aa9.71□□□□□ -0.85
SSR3-201ENST00000265044 POPDC2Q9HBU9 364 aa9.71□□□□□ -0.85
SSR3-201ENST00000265044 NOVA2Q9UNW9 492 aaKnown RBP9.71□□□□□ -0.85
SSR3-201ENST00000265044 CEP290O15078 2479 aa9.71□□□□□ -0.85
SSR3-201ENST00000265044 NDC80O14777 642 aa9.71□□□□□ -0.86
SSR3-201ENST00000265044 STAU1O95793 577 aaKnown RBP9.71□□□□□ -0.86
SSR3-201ENST00000265044 TRUB2O95900 331 aaKnown RBP9.71□□□□□ -0.86
SSR3-201ENST00000265044 ZSCAN5DPP0CG00 497 aa9.71□□□□□ -0.86
SSR3-201ENST00000265044 EPHB2P29323 1055 aa9.71□□□□□ -0.86
SSR3-201ENST00000265044 ITKQ08881 620 aa9.71□□□□□ -0.86
SSR3-201ENST00000265044 CENPUQ71F23 418 aa9.71□□□□□ -0.86
SSR3-201ENST00000265044 ZNF280BQ86YH2 543 aa9.71□□□□□ -0.86
SSR3-201ENST00000265044 FUKQ8N0W3 1084 aa9.71□□□□□ -0.86
SSR3-201ENST00000265044 PIWIL1Q96J94 861 aaKnown RBP9.71□□□□□ -0.86
SSR3-201ENST00000265044 ZNF512Q96ME7 567 aaPredicted RBP9.71□□□□□ -0.86
SSR3-201ENST00000265044 PPP1R10Q96QC0 940 aaKnown RBP9.71□□□□□ -0.86
SSR3-201ENST00000265044 YME1L1Q96TA2 773 aa9.71□□□□□ -0.86
SSR3-201ENST00000265044 SNRNP25Q9BV90 132 aaKnown RBP9.71□□□□□ -0.86
SSR3-201ENST00000265044 GDF3Q9NR23 364 aa9.71□□□□□ -0.86
SSR3-201ENST00000265044 RAB6BQ9NRW1 208 aa9.71□□□□□ -0.86
SSR3-201ENST00000265044 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.71□□□□□ -0.86
SSR3-201ENST00000265044 NENFQ9UMX5 172 aa9.71□□□□□ -0.86
SSR3-201ENST00000265044 RASGRF2O14827 1237 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 CD48P09326 243 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 ZFXP17010 805 aaPredicted RBP9.7□□□□□ -0.86
SSR3-201ENST00000265044 WARSP23381 471 aaKnown RBP9.7□□□□□ -0.86
SSR3-201ENST00000265044 CYP2F1P24903 491 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 CST5P28325 142 aaPredicted RBP9.7□□□□□ -0.86
SSR3-201ENST00000265044 LRPAP1P30533 357 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 MRPS5P82675 430 aaKnown RBP9.7□□□□□ -0.86
SSR3-201ENST00000265044 SARNPP82979 210 aaKnown RBP9.7□□□□□ -0.86
SSR3-201ENST00000265044 BTG3Q14201 252 aaPredicted RBP9.7□□□□□ -0.86
SSR3-201ENST00000265044 PDK2Q15119 407 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 ZBTB6Q15916 424 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 FAXCQ5TGI0 409 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 ARHGAP17Q68EM7 881 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 SYDE1Q6ZW31 735 aaPredicted RBP9.7□□□□□ -0.86
SSR3-201ENST00000265044 ZBED8Q8IZ13 594 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 MYCBPAPQ8TBZ2 947 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 GPR152Q8TDT2 470 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.7□□□□□ -0.86
SSR3-201ENST00000265044 B3GALT6Q96L58 329 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 RBM15Q96T37 977 aaKnown RBP eCLIP9.7□□□□□ -0.86
SSR3-201ENST00000265044 TBCBQ99426 244 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 HNRNPABQ99729 332 aaKnown RBP9.7□□□□□ -0.86
SSR3-201ENST00000265044 EPAS1Q99814 870 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 RHOBTB2Q9BYZ6 727 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 TBC1D13Q9NVG8 400 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 KLHL8Q9P2G9 620 aaPredicted RBP9.7□□□□□ -0.86
SSR3-201ENST00000265044 TXNDC16Q9P2K2 825 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 ZNF623O75123 536 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 APRTP07741 180 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 NOS2P35228 1153 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 HSD17B3P37058 310 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 ATXN1P54253 815 aaKnown RBP9.7□□□□□ -0.86
SSR3-201ENST00000265044 PDIA2Q13087 525 aaKnown RBP9.7□□□□□ -0.86
SSR3-201ENST00000265044 KYNUQ16719 465 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 FNIP1Q8TF40 1166 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 LRRN4Q8WUT4 740 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 SLC35F5Q8WV83 523 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 RSPH1Q8WYR4 309 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 MCRS1Q96EZ8 462 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 KLC2Q9H0B6 622 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 FAM124BQ9H5Z6 455 aaPredicted RBP9.7□□□□□ -0.86
SSR3-201ENST00000265044 SLC27A5Q9Y2P5 690 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 NEU2Q9Y3R4 380 aa9.7□□□□□ -0.86
SSR3-201ENST00000265044 PCDHB5Q9Y5E4 795 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms