RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 DRG2P55039 364 aaKnown RBP17.31■□□□□ 0.36
PHRF1-201ENST00000264555 MUC3BQ9H195 1237 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.31■□□□□ 0.36
PHRF1-201ENST00000264555 NR2C2P49116 596 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 DGKZQ13574 1117 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 C16orf89Q6UX73 402 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 DPYSL4O14531 572 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 NOL4O94818 638 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 HADHAP40939 763 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 TAF2Q6P1X5 1199 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 PHF13Q86YI8 300 aaPredicted RBP17.3■□□□□ 0.36
PHRF1-201ENST00000264555 RRN3Q9NYV6 651 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 DDX20Q9UHI6 824 aaKnown RBP17.3■□□□□ 0.36
PHRF1-201ENST00000264555 SERPINB8P50452 374 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 YWHAZP63104 245 aaKnown RBP17.3■□□□□ 0.36
PHRF1-201ENST00000264555 IFI35P80217 286 aaPredicted RBP17.3■□□□□ 0.36
PHRF1-201ENST00000264555 SYT15Q9BQS2 421 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 LRRC19Q9H756 370 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 HEY2Q9UBP5 337 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 SLC30A1Q9Y6M5 507 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 OPLAHO14841 1288 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 ANP32DO95626 131 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 MYBL2P10244 700 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 CYB5D1Q6P9G0 228 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 PRUNE1Q86TP1 453 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 SCUBE3Q8IX30 993 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 EFHBQ8N7U6 833 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 PCSK9Q8NBP7 692 aaKnown RBP17.3■□□□□ 0.36
PHRF1-201ENST00000264555 DTX3LQ8TDB6 740 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 L3MBTL3Q96JM7 780 aaPredicted RBP17.3■□□□□ 0.36
PHRF1-201ENST00000264555 OSBPL1AQ9BXW6 950 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 IGLV3-22A0A075B6J6 115 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 RNF103-CHMP3A0A140T963 221 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 PYGLP06737 847 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 CNGA2Q16280 664 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 FAM83EQ2M2I3 478 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 TTMPQ5BVD1 217 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 LRRC8EQ6NSJ5 796 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 POTEAQ6S8J7 498 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 SETD3Q86TU7 594 aaPredicted RBP17.3■□□□□ 0.36
PHRF1-201ENST00000264555 TLK2Q86UE8 772 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 COLGALT1Q8NBJ5 622 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 CATSPER1Q8NEC5 780 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 TTYH3Q9C0H2 523 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 KIF13AQ9H1H9 1805 aa17.3■□□□□ 0.36
PHRF1-201ENST00000264555 ANGPT2O15123 496 aa17.29■□□□□ 0.36
PHRF1-201ENST00000264555 HNRNPH1P31943 449 aaKnown RBP17.29■□□□□ 0.36
PHRF1-201ENST00000264555 ELK3P41970 407 aa17.29■□□□□ 0.36
PHRF1-201ENST00000264555 RRP1BQ14684 758 aaKnown RBP17.29■□□□□ 0.36
PHRF1-201ENST00000264555 NRBF2Q96F24 287 aa17.29■□□□□ 0.36
PHRF1-201ENST00000264555 RGPD1P0DJD0 1748 aa17.29■□□□□ 0.36
PHRF1-201ENST00000264555 KCNA2P16389 499 aa17.29■□□□□ 0.36
PHRF1-201ENST00000264555 KDELR1P24390 212 aa17.29■□□□□ 0.36
PHRF1-201ENST00000264555 TARSP26639 723 aaKnown RBP17.29■□□□□ 0.36
PHRF1-201ENST00000264555 ETFBP38117 255 aa17.29■□□□□ 0.36
PHRF1-201ENST00000264555 ABCE1P61221 599 aaKnown RBP17.29■□□□□ 0.36
PHRF1-201ENST00000264555 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.29■□□□□ 0.361e-6■■■□□ 18.6
PHRF1-201ENST00000264555 PRELID2Q8N945 189 aa17.29■□□□□ 0.36
PHRF1-201ENST00000264555 SPDYE1Q8NFV5 336 aaPredicted RBP17.29■□□□□ 0.36
PHRF1-201ENST00000264555 SNX19Q92543 992 aa17.29■□□□□ 0.36
PHRF1-201ENST00000264555 PRRG1O14668 218 aa17.29■□□□□ 0.36
PHRF1-201ENST00000264555 CALCAP01258 141 aa17.29■□□□□ 0.36
PHRF1-201ENST00000264555 ATXN2LQ8WWM7 1075 aaKnown RBP17.29■□□□□ 0.36
PHRF1-201ENST00000264555 KLRG1Q96E93 195 aa17.29■□□□□ 0.36
PHRF1-201ENST00000264555 UPP2O95045 317 aa17.29■□□□□ 0.36
PHRF1-201ENST00000264555 MAP1SQ66K74 1059 aaPredicted RBP17.29■□□□□ 0.36
PHRF1-201ENST00000264555 DENND1BQ6P3S1 775 aa17.29■□□□□ 0.36
PHRF1-201ENST00000264555 ABHD15Q6UXT9 468 aa17.29■□□□□ 0.36
PHRF1-201ENST00000264555 E5RJQ4 531 aa17.28■□□□□ 0.36
PHRF1-201ENST00000264555 H2AFYO75367 372 aaKnown RBP17.28■□□□□ 0.36
PHRF1-201ENST00000264555 NQO1P15559 274 aaKnown RBP17.28■□□□□ 0.36
PHRF1-201ENST00000264555 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.28■□□□□ 0.36
PHRF1-201ENST00000264555 MTG1Q9BT17 334 aaPredicted RBP17.28■□□□□ 0.36
PHRF1-201ENST00000264555 ILKAPQ9H0C8 392 aaPredicted RBP17.28■□□□□ 0.36
PHRF1-201ENST00000264555 KDM3BQ7LBC6 1761 aa17.28■□□□□ 0.36
PHRF1-201ENST00000264555 SLIT2O94813 1529 aa17.28■□□□□ 0.36
PHRF1-201ENST00000264555 DNAJC6O75061 913 aa17.28■□□□□ 0.36
PHRF1-201ENST00000264555 CCNE2O96020 404 aa17.28■□□□□ 0.36
PHRF1-201ENST00000264555 RAB27AP51159 221 aa17.28■□□□□ 0.36
PHRF1-201ENST00000264555 ARHGDIAP52565 204 aa17.28■□□□□ 0.36
PHRF1-201ENST00000264555 ADIGQ0VDE8 80 aa17.28■□□□□ 0.36
PHRF1-201ENST00000264555 RPRD1AQ96P16 312 aaPredicted RBP17.28■□□□□ 0.36
PHRF1-201ENST00000264555 TSC22D3Q99576 134 aa17.28■□□□□ 0.36
PHRF1-201ENST00000264555 TSR3Q9UJK0 312 aaKnown RBP17.28■□□□□ 0.36
PHRF1-201ENST00000264555 PCDHB8Q9UN66 801 aa17.28■□□□□ 0.36
PHRF1-201ENST00000264555 DRG1Q9Y295 367 aaKnown RBP17.28■□□□□ 0.36
PHRF1-201ENST00000264555 M0R2N6 131 aa17.28■□□□□ 0.36
PHRF1-201ENST00000264555 COPS5Q92905 334 aa17.28■□□□□ 0.36
PHRF1-201ENST00000264555 MTMR14Q8NCE2 650 aa17.28■□□□□ 0.36
PHRF1-201ENST00000264555 UBE2OQ9C0C9 1292 aaKnown RBP17.28■□□□□ 0.36
PHRF1-201ENST00000264555 ENO3P13929 434 aaPredicted RBP17.28■□□□□ 0.36
PHRF1-201ENST00000264555 PSEN2P49810 448 aa17.28■□□□□ 0.36
PHRF1-201ENST00000264555 NOMO3P69849 1222 aa17.28■□□□□ 0.36
PHRF1-201ENST00000264555 DUPD1Q68J44 220 aa17.28■□□□□ 0.36
PHRF1-201ENST00000264555 UNC93AQ86WB7 457 aa17.28■□□□□ 0.36
PHRF1-201ENST00000264555 OR5B17Q8NGF7 314 aa17.28■□□□□ 0.36
PHRF1-201ENST00000264555 SLC2A14Q8TDB8 520 aa17.28■□□□□ 0.36
PHRF1-201ENST00000264555 CDT1Q9H211 546 aa17.28■□□□□ 0.36
PHRF1-201ENST00000264555 IKZF4Q9H2S9 585 aa17.28■□□□□ 0.36
PHRF1-201ENST00000264555 ST6GALNAC4Q9H4F1 302 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms