RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 C1orf228Q6PIY5 440 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 CDHR3Q6ZTQ4 885 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 ARPINQ7Z6K5 226 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 RFX6Q8HWS3 928 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 TMEM126BQ8IUX1 230 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 IGDCC3Q8IVU1 814 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 LRRC39Q96DD0 335 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 MECRQ9BV79 373 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 SLC13A1Q9BZW2 595 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 XAB2Q9HCS7 855 aaKnown RBP12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 HOMER2Q9NSB8 354 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 SH3BP1Q9Y3L3 701 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 DTNAQ9Y4J8 743 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 FAM189A1O60320 539 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 RBP3P10745 1247 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 ERFP50548 548 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 ZNF132P52740 706 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 FKBP1AP62942 108 aaKnown RBP12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 SLC25A3Q00325 362 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 ROR1Q01973 937 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 OGDHQ02218 1023 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 TTLL12Q14166 644 aaPredicted RBP12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 DOK7Q18PE1 504 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 GRAMD1BQ3KR37 738 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 SLFN12LQ6IEE8 588 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 PIWIL2Q8TC59 973 aaKnown RBP12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 FNIP1Q8TF40 1166 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 ACSF2Q96CM8 615 aaPredicted RBP12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 CFAP36Q96G28 342 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 KCNK16Q96T55 309 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 SH2D3AQ9BRG2 576 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 APOBEC3GQ9HC16 384 aaKnown RBP12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 SAE1Q9UBE0 346 aaPredicted RBP12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 MARCOQ9UEW3 520 aaPredicted RBP12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 BCAP29Q9UHQ4 241 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 CDH22Q9UJ99 828 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 FEM1BQ9UK73 627 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 DMTF1Q9Y222 760 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 ZSCAN9O15535 394 aaPredicted RBP12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 RFPL1O75677 317 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 VNN1O95497 513 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 EIF4BP23588 611 aaKnown RBP12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 CNTFP26441 200 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 PEX2P28328 305 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 PRDX6P30041 224 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 SSTR3P32745 418 aaPredicted RBP12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 FDFT1P37268 417 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 EPHB1P54762 984 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 MRPS5P82675 430 aaKnown RBP12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 HPCAP84074 193 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 KCNJ11Q14654 390 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 OGFRL1Q5TC84 451 aaPredicted RBP12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 DARS2Q6PI48 645 aaKnown RBP12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 RBM44Q6ZP01 1051 aaKnown RBP12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 AMIGO3Q86WK7 504 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 KCTD6Q8NC69 237 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 FAF2Q96CS3 445 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 CYP26B1Q9NR63 512 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 PAK5Q9P286 719 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 ZC3H7BQ9UGR2 993 aaKnown RBP12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 RAB26Q9ULW5 256 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 TTLL3Q9Y4R7 772 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 A0A0B4J269 797 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 CCDC195A0A1B0GUA6 201 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 HNRNPRO43390 633 aaKnown RBP12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 TNFAIP8O95379 198 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 RAG1P15918 1043 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 USP4Q13107 963 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 UGCGQ16739 394 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 RABGAP1LQ5R372 815 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 LMBRD2Q68DH5 695 aaPredicted RBP12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 NDUFAF2Q8N183 169 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 FBXW8Q8N3Y1 598 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 PPP4R1Q8TF05 950 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 PLEKHG4BQ96PX9 1271 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 RSAD1Q9HA92 442 aa12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 HERC5Q9UII4 1024 aaKnown RBP12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 AGO2Q9UKV8 859 aaKnown RBP12.85□□□□□ -0.35
CHMP2B-201ENST00000263780 TMEM150BA6NC51 233 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 CCDC160A6NGH7 325 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 MEI4A8MW99 385 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 VILLO15195 856 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 ALDH1A3P47895 512 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 HSPA13P48723 471 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 AP3M2P53677 418 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 SLC25A11Q02978 314 aaKnown RBP12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 DEUP1Q05D60 604 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 FSCBQ5H9T9 825 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 TIFABQ6ZNK6 161 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 PODNQ7Z5L7 613 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 AHI1Q8N157 1196 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 TAB3Q8N5C8 712 aaPredicted RBP12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 BSNDQ8WZ55 320 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 CEP170P1Q96L14 293 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 DNAJC28Q9NX36 388 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 MAP3K20Q9NYL2 800 aaKnown RBP12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 POMPQ9Y244 141 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 KLRG2A4D1S0 409 aaPredicted RBP12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 PROCP04070 461 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 SMIM18P0DKX4 95 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms