RNA–Protein interactions for RNA: ENST00000261597.8

NDC80-201, Transcript of NDC80, kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC80, Length 2,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC80-201ENST00000261597 SLC39A12Q504Y0 691 aa7.04□□□□□ -1.28
NDC80-201ENST00000261597 TEX35Q5T0J7 233 aa7.04□□□□□ -1.28
NDC80-201ENST00000261597 SPOUT1Q5T280 376 aaKnown RBP7.04□□□□□ -1.28
NDC80-201ENST00000261597 VSTM1Q6UX27 236 aa7.04□□□□□ -1.28
NDC80-201ENST00000261597 LYPD8Q6UX82 237 aa7.04□□□□□ -1.28
NDC80-201ENST00000261597 ZNF365Q70YC5 407 aa7.04□□□□□ -1.28
NDC80-201ENST00000261597 OTOP2Q7RTS6 562 aa7.04□□□□□ -1.28
NDC80-201ENST00000261597 RNF168Q8IYW5 571 aaPredicted RBP7.04□□□□□ -1.28
NDC80-201ENST00000261597 RCOR2Q8IZ40 523 aa7.04□□□□□ -1.28
NDC80-201ENST00000261597 PHTF2Q8N3S3 785 aa7.04□□□□□ -1.28
NDC80-201ENST00000261597 ARFGAP1Q8N6T3 406 aa7.04□□□□□ -1.28
NDC80-201ENST00000261597 EXD1Q8NHP7 514 aa7.04□□□□□ -1.28
NDC80-201ENST00000261597 PIWIL1Q96J94 861 aaKnown RBP7.04□□□□□ -1.28
NDC80-201ENST00000261597 ZNF558Q96NG5 402 aa7.04□□□□□ -1.28
NDC80-201ENST00000261597 DDX23Q9BUQ8 820 aaKnown RBP7.04□□□□□ -1.28
NDC80-201ENST00000261597 SMARCAL1Q9NZC9 954 aa7.04□□□□□ -1.28
NDC80-201ENST00000261597 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.04□□□□□ -1.28
NDC80-201ENST00000261597 PCDHB5Q9Y5E4 795 aa7.04□□□□□ -1.28
NDC80-201ENST00000261597 V9GYY5 206 aaPredicted RBP7.04□□□□□ -1.28
NDC80-201ENST00000261597 VWA8A3KMH1 1905 aa7.04□□□□□ -1.28
NDC80-201ENST00000261597 COL4A6Q14031 1691 aa7.04□□□□□ -1.28
NDC80-201ENST00000261597 NLRC5Q86WI3 1866 aa7.04□□□□□ -1.28
NDC80-201ENST00000261597 PTPRDP23468 1912 aa7.04□□□□□ -1.28
NDC80-201ENST00000261597 ALPK3Q96L96 1907 aa7.04□□□□□ -1.28
NDC80-201ENST00000261597 HSF2BPO75031 334 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 LRCH4O75427 683 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 GRAP2O75791 330 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 RECKO95980 971 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 KRT7P08729 469 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 FLT3P36888 993 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 PBX3P40426 434 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 MAGEA11P43364 429 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 NDUFV1P49821 464 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 CACNA2D1P54289 1103 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 COPS2P61201 443 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 YWHAZP63104 245 aaKnown RBP7.03□□□□□ -1.28
NDC80-201ENST00000261597 GPR17Q13304 367 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 NAA30Q147X3 362 aaPredicted RBP7.03□□□□□ -1.28
NDC80-201ENST00000261597 GLE1Q53GS7 698 aaKnown RBP7.03□□□□□ -1.28
NDC80-201ENST00000261597 RTP2Q5QGT7 225 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 DAB2IPQ5VWQ8 1189 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 PM20D1Q6GTS8 502 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 CCDC70Q6NSX1 233 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 TRNP1Q6NT89 227 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 FAM117BQ6P1L5 589 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 PSRC1Q6PGN9 363 aaPredicted RBP7.03□□□□□ -1.28
NDC80-201ENST00000261597 TAS1R1Q7RTX1 841 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 RETREG3Q86VR2 466 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 TMEM173Q86WV6 379 aaPredicted RBP7.03□□□□□ -1.28
NDC80-201ENST00000261597 SLC39A11Q8N1S5 342 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 COLGALT1Q8NBJ5 622 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 NOA1Q8NC60 698 aaKnown RBP7.03□□□□□ -1.28
NDC80-201ENST00000261597 CLEC4CQ8WTT0 213 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 C2orf15Q8WU43 125 aaKnown RBP7.03□□□□□ -1.28
NDC80-201ENST00000261597 BCL7CQ8WUZ0 217 aaPredicted RBP7.03□□□□□ -1.28
NDC80-201ENST00000261597 MAIP1Q8WWC4 291 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 IRGQQ8WZA9 623 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 CENPIQ92674 756 aaPredicted RBP7.03□□□□□ -1.28
NDC80-201ENST00000261597 RBM41Q96IZ5 413 aaKnown RBP7.03□□□□□ -1.28
NDC80-201ENST00000261597 C8orf48Q96LL4 319 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 HTATIP2Q9BUP3 242 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 AAASQ9NRG9 546 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 CHST7Q9NS84 486 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 TMEM30AQ9NV96 361 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.03□□□□□ -1.28
NDC80-201ENST00000261597 SPG21Q9NZD8 308 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 METRNQ9UJH8 293 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 BACE2Q9Y5Z0 518 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 KRIT1O00522 736 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 FSCN2O14926 492 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 DAB1O75553 588 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 GJB5O95377 273 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 TRUB2O95900 331 aaKnown RBP7.03□□□□□ -1.28
NDC80-201ENST00000261597 ZBED1O96006 694 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 TUBBP07437 444 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 OR4Q2P0C623 313 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 CYP2F1P24903 491 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 MIPP30301 263 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 NOS2P35228 1153 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 GRIK1P39086 918 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 MATKP42679 507 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 DAOAP59103 153 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 HTRA4P83105 476 aaPredicted RBP7.03□□□□□ -1.28
NDC80-201ENST00000261597 SLC25A11Q02978 314 aaKnown RBP7.03□□□□□ -1.28
NDC80-201ENST00000261597 C2orf54Q08AI8 447 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 ELF2Q15723 593 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 BOLA3Q53S33 107 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 TMEM240Q5SV17 173 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 TMCO2Q7Z6W1 182 aaPredicted RBP7.03□□□□□ -1.28
NDC80-201ENST00000261597 DDX53Q86TM3 631 aaKnown RBP7.03□□□□□ -1.28
NDC80-201ENST00000261597 SLC13A5Q86YT5 568 aaPredicted RBP7.03□□□□□ -1.28
NDC80-201ENST00000261597 C7orf61Q8IZ16 206 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 SPPL2BQ8TCT7 592 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 PIK3R5Q8WYR1 880 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 HERVK_113Q902F9 699 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 TMEM169Q96HH4 297 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 B3GALT6Q96L58 329 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 YME1L1Q96TA2 773 aa7.03□□□□□ -1.28
NDC80-201ENST00000261597 C11orf84Q9BUA3 381 aaPredicted RBP7.03□□□□□ -1.28
NDC80-201ENST00000261597 RHOBTB2Q9BYZ6 727 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms