RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 SLC45A4Q5BKX6 768 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 PCDH20Q8N6Y1 951 aaKnown RBP10.48□□□□□ -0.73
PALB2-201ENST00000261584 ASAP3Q8TDY4 903 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 PSPC1Q8WXF1 523 aaKnown RBP10.48□□□□□ -0.73
PALB2-201ENST00000261584 B3GNT5Q9BYG0 378 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 NIF3L1Q9GZT8 377 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 CAB39LQ9H9S4 337 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 PPM1HQ9ULR3 514 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 OR6B1O95007 311 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 OLIG2Q13516 323 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 BMT2Q1RMZ1 405 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 KIF19Q2TAC6 998 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 RAB6CQ53S08 254 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 GJC2Q5T442 439 aaPredicted RBP10.48□□□□□ -0.73
PALB2-201ENST00000261584 TTC39BQ5VTQ0 682 aaPredicted RBP10.48□□□□□ -0.73
PALB2-201ENST00000261584 JADE1Q6IE81 842 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 SLFN12LQ6IEE8 588 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 TRIM42Q8IWZ5 723 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 ULK2Q8IYT8 1036 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 CPT1BQ92523 772 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 ZNF516Q92618 1163 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 AZIN2Q96A70 460 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 RAB6CQ9H0N0 254 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 EBF3Q9H4W6 596 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 ETAA1Q9NY74 926 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 CNTNAP2Q9UHC6 1331 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 A8MXQ7 604 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 B4GALT5O43286 388 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 ACADSP16219 412 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 PEX2P28328 305 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 ATXN1P54253 815 aaKnown RBP10.47□□□□□ -0.73
PALB2-201ENST00000261584 WNT7BP56706 349 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 RIPK1Q13546 671 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 PGM5Q15124 567 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 EFHC1Q5JVL4 640 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 DLK2Q6UY11 383 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 ENOSF1Q7L5Y1 443 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 SLC26A11Q86WA9 606 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 ALLCQ8N6M5 410 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 FAM172AQ8WUF8 416 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 KIF12Q96FN5 646 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 GMCL1Q96IK5 515 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 MIPEPQ99797 713 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 LPIN3Q9BQK8 851 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 KLHL4Q9C0H6 718 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 THEGQ9P2T0 379 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 TMX2Q9Y320 296 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 SNX13Q9Y5W8 968 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 SLIT3O75094 1523 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 ADGRA3Q8IWK6 1321 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 ATXN2Q99700 1313 aaKnown RBP10.47□□□□□ -0.73
PALB2-201ENST00000261584 MED7O43513 233 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 ZNF862O60290 1169 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 OASLQ15646 514 aaKnown RBP10.47□□□□□ -0.73
PALB2-201ENST00000261584 WASHC2DQ5SRD0 308 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 MOXD1Q6UVY6 613 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 IGDCC3Q8IVU1 814 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 TFAP2BQ92481 460 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 WNK4Q96J92 1243 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 Q9H521 79 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 PCDH9Q9HC56 1237 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 CNTNAP4Q9C0A0 1308 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 LMO7Q8WWI1 1683 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 CXorf49A8MYA2 514 aaPredicted RBP10.47□□□□□ -0.73
PALB2-201ENST00000261584 P4HA2O15460 535 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 PHGDHO43175 533 aaKnown RBP10.47□□□□□ -0.73
PALB2-201ENST00000261584 MAP3K13O43283 966 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 CAP2P40123 477 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 OGDHQ02218 1023 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 PCSK7Q16549 785 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 DCAF6Q58WW2 860 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 C10orf82Q8WW14 230 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 CDRT15Q96T59 188 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 OMDQ99983 421 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 DDX56Q9NY93 547 aaKnown RBP10.47□□□□□ -0.73
PALB2-201ENST00000261584 TAGLN3Q9UI15 199 aa10.47□□□□□ -0.73
PALB2-201ENST00000261584 E5RJQ4 531 aa10.46□□□□□ -0.73
PALB2-201ENST00000261584 PARNO95453 639 aaKnown RBP10.46□□□□□ -0.73
PALB2-201ENST00000261584 MGAT1P26572 445 aa10.46□□□□□ -0.73
PALB2-201ENST00000261584 EPHA3P29320 983 aa10.46□□□□□ -0.73
PALB2-201ENST00000261584 LY6KQ17RY6 165 aa10.46□□□□□ -0.73
PALB2-201ENST00000261584 SATL1Q86VE3 508 aa10.46□□□□□ -0.73
PALB2-201ENST00000261584 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.46□□□□□ -0.73
PALB2-201ENST00000261584 FAM163AQ96GL9 167 aaPredicted RBP10.46□□□□□ -0.73
PALB2-201ENST00000261584 MRPL1Q9BYD6 325 aaKnown RBP10.46□□□□□ -0.73
PALB2-201ENST00000261584 MAGEB5Q9BZ81 275 aa10.46□□□□□ -0.73
PALB2-201ENST00000261584 WARS2Q9UGM6 360 aaKnown RBP10.46□□□□□ -0.73
PALB2-201ENST00000261584 hCG_1818297A0A087WSY0 165 aa10.46□□□□□ -0.73
PALB2-201ENST00000261584 AKAP10O43572 662 aa10.46□□□□□ -0.73
PALB2-201ENST00000261584 NOL3O60936 208 aaKnown RBP10.46□□□□□ -0.73
PALB2-201ENST00000261584 PMLP29590 882 aa10.46□□□□□ -0.73
PALB2-201ENST00000261584 SFNP31947 248 aa10.46□□□□□ -0.73
PALB2-201ENST00000261584 YWHAEP62258 255 aaKnown RBP10.46□□□□□ -0.73
PALB2-201ENST00000261584 STXBP2Q15833 593 aa10.46□□□□□ -0.73
PALB2-201ENST00000261584 XKR3Q5GH77 459 aa10.46□□□□□ -0.73
PALB2-201ENST00000261584 TRIM72Q6ZMU5 477 aa10.46□□□□□ -0.73
PALB2-201ENST00000261584 CDHR3Q6ZTQ4 885 aa10.46□□□□□ -0.73
PALB2-201ENST00000261584 PARP8Q8N3A8 854 aa10.46□□□□□ -0.73
PALB2-201ENST00000261584 LMO3Q8TAP4 145 aa10.46□□□□□ -0.73
PALB2-201ENST00000261584 APOPT1Q96IL0 206 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms