RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 BMPR2Q13873 1038 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 WLSQ5T9L3 541 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 INTS5Q6P9B9 1019 aaKnown RBP12.49□□□□□ -0.41
COL8A1-201ENST00000261037 TTC33Q6PID6 262 aaPredicted RBP12.49□□□□□ -0.41
COL8A1-201ENST00000261037 EFL1Q7Z2Z2 1120 aaKnown RBP12.49□□□□□ -0.41
COL8A1-201ENST00000261037 CELF6Q96J87 481 aaKnown RBP12.49□□□□□ -0.41
COL8A1-201ENST00000261037 FDXACB1Q9BRP7 624 aaPredicted RBP12.49□□□□□ -0.41
COL8A1-201ENST00000261037 BBS2Q9BXC9 721 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 AAASQ9NRG9 546 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 DCDC2Q9UHG0 476 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 AAR2Q9Y312 384 aaKnown RBP12.49□□□□□ -0.41
COL8A1-201ENST00000261037 PPLO60437 1756 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 TMEM131LA2VDJ0 1609 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 PARNO95453 639 aaKnown RBP12.49□□□□□ -0.41
COL8A1-201ENST00000261037 CKMP06732 381 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 SLC2A3P11169 496 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 GPC1P35052 558 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 FNTAP49354 379 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 IRAK1P51617 712 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 CNTN1Q12860 1018 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 CSHL1Q14406 222 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 COL23A1Q86Y22 540 aaPredicted RBP12.49□□□□□ -0.41
COL8A1-201ENST00000261037 REXO1L1PQ8IX06 675 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 OSMRQ99650 979 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 MROH2AA6NES4 1674 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 RHOCP08134 193 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 CYP2C8P10632 490 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 DARSP14868 501 aaKnown RBP12.49□□□□□ -0.41
COL8A1-201ENST00000261037 CYP24A1Q07973 514 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 CAMK2GQ13555 558 aaPredicted RBP12.49□□□□□ -0.41
COL8A1-201ENST00000261037 TTLL9Q3SXZ7 439 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 MYO1HQ8N1T3 1032 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 EDEM1Q92611 657 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 COPS7BQ9H9Q2 264 aaPredicted RBP12.49□□□□□ -0.41
COL8A1-201ENST00000261037 CD248Q9HCU0 757 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 DNAJC16Q9Y2G8 782 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 CEMIPQ8WUJ3 1361 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 CNTNAP4Q9C0A0 1308 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 SMAPO00193 183 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 ZNF23P17027 643 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 PSMA4P25789 261 aaKnown RBP12.48□□□□□ -0.41
COL8A1-201ENST00000261037 RHOAP61586 193 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 RCN1Q15293 331 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 NT5DC3Q86UY8 548 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 SDR42E2A6NKP2 422 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 E9PBE3 544 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 KLHL41O60662 606 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 STAU1O95793 577 aaKnown RBP12.48□□□□□ -0.41
COL8A1-201ENST00000261037 MYL4P12829 197 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 BGNP21810 368 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 AKAP5P24588 427 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 TAS1R2Q8TE23 839 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 YME1L1Q96TA2 773 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 USP20Q9Y2K6 914 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 FAM205AQ6ZU69 1335 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 RGL2O15211 777 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 RRM1P23921 792 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 TOB1P50616 345 aaPredicted RBP12.48□□□□□ -0.41
COL8A1-201ENST00000261037 TRIP4Q15650 581 aaPredicted RBP12.48□□□□□ -0.41
COL8A1-201ENST00000261037 B3GALNT2Q8NCR0 500 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 PAFAH2Q99487 392 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 SETD4Q9NVD3 440 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 LINC00854A0A1B0GVQ3 168 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 SERPINB3P29508 390 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 DSG1Q02413 1049 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 TROAPQ12815 778 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 NFYCQ13952 458 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 PTPAQ15257 358 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 TIGD7Q6NT04 549 aaPredicted RBP12.48□□□□□ -0.41
COL8A1-201ENST00000261037 VN1R5Q7Z5H4 357 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 PHACTR4Q8IZ21 702 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 KIRREL3Q8IZU9 778 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 TEX9Q8N6V9 391 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 OSGEPL1Q9H4B0 414 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 GPRC5DQ9NZD1 345 aa12.48□□□□□ -0.41
COL8A1-201ENST00000261037 DCCP43146 1447 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 DDTLA6NHG4 134 aaPredicted RBP12.47□□□□□ -0.41
COL8A1-201ENST00000261037 HNRNPRO43390 633 aaKnown RBP12.47□□□□□ -0.41
COL8A1-201ENST00000261037 PLA2G6O60733 806 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 MT-CO1P00395 513 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 CKBP12277 381 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 MUTP22033 750 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 ACAT1P24752 427 aaKnown RBP12.47□□□□□ -0.41
COL8A1-201ENST00000261037 TKTL1P51854 596 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 BCAT1P54687 386 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 BACE1P56817 501 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 LAMTOR4Q0VGL1 99 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 TDRD5Q8NAT2 981 aaKnown RBP12.47□□□□□ -0.41
COL8A1-201ENST00000261037 MRPS31Q92665 395 aaKnown RBP12.47□□□□□ -0.41
COL8A1-201ENST00000261037 TMEM176AQ96HP8 235 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 MAN1C1Q9NR34 630 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 LRRIQ3A6PVS8 624 aaPredicted RBP12.47□□□□□ -0.41
COL8A1-201ENST00000261037 ZNF682O95780 498 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 TPH1P17752 444 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 PLCL1Q15111 1095 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 PDK2Q15119 407 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 CEP78Q5JTW2 689 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 NLRP9Q7RTR0 991 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 SETD3Q86TU7 594 aaPredicted RBP12.47□□□□□ -0.41
COL8A1-201ENST00000261037 TATDN2Q93075 761 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms