RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 ACSL3O95573 720 aa18.47■□□□□ 0.55
SSB-201ENST00000260956 GPD1P21695 349 aa18.47■□□□□ 0.55
SSB-201ENST00000260956 CD52P31358 61 aa18.47■□□□□ 0.55
SSB-201ENST00000260956 OTUD4Q01804 1114 aaKnown RBP18.47■□□□□ 0.55
SSB-201ENST00000260956 KYNUQ16719 465 aa18.47■□□□□ 0.55
SSB-201ENST00000260956 HADHQ16836 314 aaKnown RBP18.47■□□□□ 0.55
SSB-201ENST00000260956 KCNT1Q5JUK3 1230 aa18.47■□□□□ 0.55
SSB-201ENST00000260956 SH3PXD2AQ5TCZ1 1133 aa18.47■□□□□ 0.55
SSB-201ENST00000260956 PMF1Q6P1K2 205 aa18.47■□□□□ 0.55
SSB-201ENST00000260956 TMEM110Q86TL2 294 aa18.47■□□□□ 0.55
SSB-201ENST00000260956 UNC93AQ86WB7 457 aa18.47■□□□□ 0.55
SSB-201ENST00000260956 IPO4Q8TEX9 1081 aaKnown RBP18.47■□□□□ 0.55
SSB-201ENST00000260956 STK32AQ8WU08 396 aa18.47■□□□□ 0.55
SSB-201ENST00000260956 CCT8L2Q96SF2 557 aa18.47■□□□□ 0.55
SSB-201ENST00000260956 DNAJC17Q9NVM6 304 aaKnown RBP18.47■□□□□ 0.55
SSB-201ENST00000260956 SHOC2Q9UQ13 582 aa18.47■□□□□ 0.55
SSB-201ENST00000260956 SPTLC1O15269 473 aa18.46■□□□□ 0.55
SSB-201ENST00000260956 RGS16O15492 202 aaPredicted RBP18.46■□□□□ 0.55
SSB-201ENST00000260956 FGFR1P11362 822 aa18.46■□□□□ 0.55
SSB-201ENST00000260956 TMCO2Q7Z6W1 182 aaPredicted RBP18.46■□□□□ 0.55
SSB-201ENST00000260956 ACOT1Q86TX2 421 aa18.46■□□□□ 0.55
SSB-201ENST00000260956 BEST2Q8NFU1 509 aa18.46■□□□□ 0.55
SSB-201ENST00000260956 MDM1Q8TC05 714 aa18.46■□□□□ 0.55
SSB-201ENST00000260956 RXFP2Q8WXD0 754 aa18.46■□□□□ 0.55
SSB-201ENST00000260956 HERVK_113Q902F9 699 aa18.46■□□□□ 0.55
SSB-201ENST00000260956 XPO6Q96QU8 1125 aaKnown RBP18.46■□□□□ 0.55
SSB-201ENST00000260956 TSPAN18Q96SJ8 248 aa18.46■□□□□ 0.55
SSB-201ENST00000260956 C11orf84Q9BUA3 381 aaPredicted RBP18.46■□□□□ 0.55
SSB-201ENST00000260956 CCDC134Q9H6E4 229 aa18.46■□□□□ 0.55
SSB-201ENST00000260956 SYNCQ9H7C4 482 aa18.46■□□□□ 0.55
SSB-201ENST00000260956 GDAP2Q9NXN4 497 aa18.46■□□□□ 0.55
SSB-201ENST00000260956 USP18Q9UMW8 372 aa18.46■□□□□ 0.55
SSB-201ENST00000260956 UBQLN1Q9UMX0 589 aaKnown RBP18.46■□□□□ 0.55
SSB-201ENST00000260956 ZNF148Q9UQR1 794 aa18.46■□□□□ 0.55
SSB-201ENST00000260956 SNX9Q9Y5X1 595 aa18.46■□□□□ 0.55
SSB-201ENST00000260956 SOX1O00570 391 aaPredicted RBP18.46■□□□□ 0.55
SSB-201ENST00000260956 NDUFAB1O14561 156 aa18.46■□□□□ 0.55
SSB-201ENST00000260956 CST8O60676 142 aa18.46■□□□□ 0.55
SSB-201ENST00000260956 PECAM1P16284 738 aaPredicted RBP18.46■□□□□ 0.55
SSB-201ENST00000260956 GDF10P55107 478 aa18.46■□□□□ 0.55
SSB-201ENST00000260956 SOX4Q06945 474 aaPredicted RBP18.46■□□□□ 0.55
SSB-201ENST00000260956 MORF4L2Q15014 288 aa18.46■□□□□ 0.55
SSB-201ENST00000260956 GLRA4Q5JXX5 417 aa18.46■□□□□ 0.55
SSB-201ENST00000260956 PSRC1Q6PGN9 363 aaPredicted RBP18.46■□□□□ 0.55
SSB-201ENST00000260956 PRCCQ92733 491 aaPredicted RBP18.46■□□□□ 0.55
SSB-201ENST00000260956 HAUS1Q96CS2 278 aa18.46■□□□□ 0.55
SSB-201ENST00000260956 PHACTR1Q9C0D0 580 aa18.46■□□□□ 0.55
SSB-201ENST00000260956 RNF39Q9H2S5 420 aa18.46■□□□□ 0.55
SSB-201ENST00000260956 SMIM28A0A1B0GU29 152 aa18.45■□□□□ 0.54
SSB-201ENST00000260956 GRXCR1A8MXD5 290 aa18.45■□□□□ 0.54
SSB-201ENST00000260956 APOC4-APOC2K7ER74 178 aa18.45■□□□□ 0.54
SSB-201ENST00000260956 PAPSS1O43252 624 aaPredicted RBP18.45■□□□□ 0.54
SSB-201ENST00000260956 HCRTO43612 131 aa18.45■□□□□ 0.54
SSB-201ENST00000260956 PARNO95453 639 aaKnown RBP18.45■□□□□ 0.54
SSB-201ENST00000260956 APOC2P02655 101 aa18.45■□□□□ 0.54
SSB-201ENST00000260956 SLCO1A2P46721 670 aa18.45■□□□□ 0.54
SSB-201ENST00000260956 CRYBB1P53674 252 aaPredicted RBP18.45■□□□□ 0.54
SSB-201ENST00000260956 LONRF1Q17RB8 773 aa18.45■□□□□ 0.54
SSB-201ENST00000260956 CCDC14Q49A88 953 aa18.45■□□□□ 0.54
SSB-201ENST00000260956 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.45■□□□□ 0.54
SSB-201ENST00000260956 RTN4RL1Q86UN2 441 aaPredicted RBP18.45■□□□□ 0.54
SSB-201ENST00000260956 EXOC3L1Q86VI1 746 aa18.45■□□□□ 0.54
SSB-201ENST00000260956 CRYBG2Q8N1P7 616 aa18.45■□□□□ 0.54
SSB-201ENST00000260956 TTC13Q8NBP0 860 aa18.45■□□□□ 0.54
SSB-201ENST00000260956 SMG8Q8ND04 991 aaKnown RBP18.45■□□□□ 0.54
SSB-201ENST00000260956 ZNF317Q96PQ6 595 aaPredicted RBP18.45■□□□□ 0.54
SSB-201ENST00000260956 TMEM121Q9BTD3 319 aa18.45■□□□□ 0.54
SSB-201ENST00000260956 DPEP3Q9H4B8 488 aa18.45■□□□□ 0.54
SSB-201ENST00000260956 ASNSD1Q9NWL6 643 aa18.45■□□□□ 0.54
SSB-201ENST00000260956 SAE1Q9UBE0 346 aaPredicted RBP18.45■□□□□ 0.54
SSB-201ENST00000260956 TPX2Q9ULW0 747 aaKnown RBP18.45■□□□□ 0.54
SSB-201ENST00000260956 PADI3Q9ULW8 664 aa18.45■□□□□ 0.54
SSB-201ENST00000260956 TLDC2A0PJX2 215 aa18.44■□□□□ 0.54
SSB-201ENST00000260956 YARSP54577 528 aaKnown RBP18.44■□□□□ 0.54
SSB-201ENST00000260956 CORO7P57737 925 aa18.44■□□□□ 0.54
SSB-201ENST00000260956 GPS1Q13098 491 aa18.44■□□□□ 0.54
SSB-201ENST00000260956 C15orf59Q2T9L4 293 aaPredicted RBP18.44■□□□□ 0.54
SSB-201ENST00000260956 HABP4Q5JVS0 413 aaKnown RBP18.44■□□□□ 0.54
SSB-201ENST00000260956 CNKSR3Q6P9H4 555 aa18.44■□□□□ 0.54
SSB-201ENST00000260956 LINC01599Q8WXQ3 324 aa18.44■□□□□ 0.54
SSB-201ENST00000260956 RBM15Q96T37 977 aaKnown RBP eCLIP18.44■□□□□ 0.54
SSB-201ENST00000260956 MIS12Q9H081 205 aa18.44■□□□□ 0.54
SSB-201ENST00000260956 PCSK1NQ9UHG2 260 aa18.44■□□□□ 0.54
SSB-201ENST00000260956 GGA2Q9UJY4 613 aa18.44■□□□□ 0.54
SSB-201ENST00000260956 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.43■□□□□ 0.54
SSB-201ENST00000260956 GMNCA6NCL1 334 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 SMIM23A6NLE4 172 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 RPLP2P05387 115 aaKnown RBP18.43■□□□□ 0.54
SSB-201ENST00000260956 CHN1P15882 459 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 DRD4P21917 467 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 IL4RP24394 825 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 AKAP5P24588 427 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 GCAP28676 217 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 SCNN1AP37088 669 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 MAGEA4P43358 317 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 RGS7P49802 495 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 DEFB103AP81534 67 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 CBLBQ13191 982 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 DPYSL3Q14195 570 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 QPCTQ16769 361 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms