RNA–Protein interactions for RNA: ENST00000260383.11

TUBGCP4-201, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUBGCP4, Length 2,617 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-201ENST00000260383 SIN3BO75182 1162 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 CSDE1O75534 798 aaKnown RBP13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 OXSR1O95747 527 aaPredicted RBP13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 TOP3BO95985 862 aaKnown RBP13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 INHBAP08476 426 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 CFHP08603 1231 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 OCM2P0CE71 109 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 OCMP0CE72 109 aaPredicted RBP13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 CD1EP15812 388 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 ZNF23P17027 643 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 TMED10P49755 219 aaKnown RBP13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 BCAP31P51572 246 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 CTBSQ01459 385 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 TICAM1Q8IUC6 712 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 NAT8LQ8N9F0 302 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 SLC44A1Q8WWI5 657 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 FAM84AQ96KN4 292 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 NLRP4Q96MN2 994 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 SLITRK1Q96PX8 696 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 SENP7Q9BQF6 1050 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 PAIP1Q9H074 479 aaKnown RBP13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 C6orf203Q9P0P8 240 aaPredicted RBP13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 PCDHA1Q9Y5I3 950 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 IKBKGQ9Y6K9 419 aa13.81□□□□□ -0.2
TUBGCP4-201ENST00000260383 K7EPI3 171 aa13.8□□□□□ -0.2
TUBGCP4-201ENST00000260383 SNNO75324 88 aaPredicted RBP13.8□□□□□ -0.2
TUBGCP4-201ENST00000260383 AKR1B1P15121 316 aa13.8□□□□□ -0.2
TUBGCP4-201ENST00000260383 TAL1P17542 331 aaPredicted RBP13.8□□□□□ -0.2
TUBGCP4-201ENST00000260383 ACADVLP49748 655 aa13.8□□□□□ -0.2
TUBGCP4-201ENST00000260383 NDST2P52849 883 aa13.8□□□□□ -0.2
TUBGCP4-201ENST00000260383 MRPS22P82650 360 aaKnown RBP13.8□□□□□ -0.2
TUBGCP4-201ENST00000260383 SLC7A5P1Q8MH63 180 aa13.8□□□□□ -0.2
TUBGCP4-201ENST00000260383 LRGUKQ96M69 825 aa13.8□□□□□ -0.2
TUBGCP4-201ENST00000260383 AVENQ9NQS1 362 aaPredicted RBP13.8□□□□□ -0.2
TUBGCP4-201ENST00000260383 TRNAU1APQ9NX07 287 aaKnown RBP13.8□□□□□ -0.2
TUBGCP4-201ENST00000260383 RNF11Q9Y3C5 154 aa13.8□□□□□ -0.2
TUBGCP4-201ENST00000260383 MYPNQ86TC9 1320 aa13.8□□□□□ -0.2
TUBGCP4-201ENST00000260383 ALDH3B2P48448 385 aa13.8□□□□□ -0.2
TUBGCP4-201ENST00000260383 NRLP54845 237 aa13.8□□□□□ -0.2
TUBGCP4-201ENST00000260383 ZNF423Q2M1K9 1284 aa13.8□□□□□ -0.2
TUBGCP4-201ENST00000260383 TXNRD3NBQ6F5E7 133 aa13.8□□□□□ -0.2
TUBGCP4-201ENST00000260383 DRICH1Q6PGQ1 229 aaPredicted RBP13.8□□□□□ -0.2
TUBGCP4-201ENST00000260383 ARHGEF1Q92888 912 aaKnown RBP13.8□□□□□ -0.2
TUBGCP4-201ENST00000260383 HSD17B14Q9BPX1 270 aa13.8□□□□□ -0.2
TUBGCP4-201ENST00000260383 TRIM56Q9BRZ2 755 aaKnown RBP13.8□□□□□ -0.2
TUBGCP4-201ENST00000260383 SLC2A11Q9BYW1 496 aa13.8□□□□□ -0.2
TUBGCP4-201ENST00000260383 PCDH9Q9HC56 1237 aa13.8□□□□□ -0.2
TUBGCP4-201ENST00000260383 WRAP73Q9P2S5 460 aaPredicted RBP13.8□□□□□ -0.2
TUBGCP4-201ENST00000260383 RIMS3Q9UJD0 308 aa13.8□□□□□ -0.2
TUBGCP4-201ENST00000260383 ITGA11Q9UKX5 1188 aa13.8□□□□□ -0.2
TUBGCP4-201ENST00000260383 IPO5O00410 1097 aaKnown RBP13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 NDUFB5O43674 189 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 ELK3P41970 407 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 PPP4CP60510 307 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 WASHC5Q12768 1159 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 BMPR2Q13873 1038 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 SPIDRQ14159 915 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 PPP6R3Q5H9R7 873 aaPredicted RBP13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 RARS2Q5T160 578 aaKnown RBP13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 PPIL6Q8IXY8 311 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 GSDMBQ8TAX9 411 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 POMGNT1Q8WZA1 660 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 CCDC127Q96BQ5 260 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 C11orf70Q9BRQ4 267 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 KLC2Q9H0B6 622 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 DRG1Q9Y295 367 aaKnown RBP13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 E7ESA3 106 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 H0YIN7 160 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 ADRB2P07550 413 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 DSG3P32926 999 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 BTDP43251 543 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 ATXN3P54252 364 aaPredicted RBP13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 CDH15P55291 814 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 SNAP25P60880 206 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 ATP1A4Q13733 1029 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 ADGRE1Q14246 886 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 QRICH1Q2TAL8 776 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 TBC1D10BQ4KMP7 808 aaPredicted RBP13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 NANOGP8Q6NSW7 305 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 TMEM214Q6NUQ4 689 aaKnown RBP13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 ATG14Q6ZNE5 492 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 CENPSQ8N2Z9 138 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 PHTF2Q8N3S3 785 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 NAV1Q8NEY1 1877 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 TEKT1Q969V4 418 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 GPATCH1Q9BRR8 931 aaKnown RBP13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 STRA6Q9BX79 667 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 IFT122Q9HBG6 1241 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 XAB2Q9HCS7 855 aaKnown RBP13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 TOPORSQ9NS56 1045 aaPredicted RBP13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 HESX1Q9UBX0 185 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 ITGB1BP2Q9UKP3 347 aa13.79□□□□□ -0.2
TUBGCP4-201ENST00000260383 KBTBD13C9JR72 458 aa13.78□□□□□ -0.2
TUBGCP4-201ENST00000260383 KRT1P04264 644 aa13.78□□□□□ -0.2
TUBGCP4-201ENST00000260383 WEE2P0C1S8 567 aa13.78□□□□□ -0.2
TUBGCP4-201ENST00000260383 RPL10P27635 214 aaKnown RBP13.78□□□□□ -0.2
TUBGCP4-201ENST00000260383 YWHAGP61981 247 aaKnown RBP eCLIP13.78□□□□□ -0.2
TUBGCP4-201ENST00000260383 STX3Q13277 289 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms