RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 TULP2O00295 520 aa17.64■□□□□ 0.42
SDCBP-201ENST00000260130 THAP12O43422 761 aa17.64■□□□□ 0.42
SDCBP-201ENST00000260130 PRAMEF12O95522 483 aa17.64■□□□□ 0.42
SDCBP-201ENST00000260130 ZDHHC11BP0C7U3 371 aa17.64■□□□□ 0.42
SDCBP-201ENST00000260130 PSMC3P17980 439 aa17.64■□□□□ 0.42
SDCBP-201ENST00000260130 PDE6CP51160 858 aa17.64■□□□□ 0.42
SDCBP-201ENST00000260130 GPC5P78333 572 aa17.64■□□□□ 0.42
SDCBP-201ENST00000260130 PTK2Q05397 1052 aa17.64■□□□□ 0.42
SDCBP-201ENST00000260130 SIGLEC14Q08ET2 396 aa17.64■□□□□ 0.42
SDCBP-201ENST00000260130 RAB41Q5JT25 222 aa17.64■□□□□ 0.42
SDCBP-201ENST00000260130 CELF5Q8N6W0 485 aaKnown RBP17.64■□□□□ 0.42
SDCBP-201ENST00000260130 ARL14EPQ8N8R7 260 aaPredicted RBP17.64■□□□□ 0.42
SDCBP-201ENST00000260130 SLC35F5Q8WV83 523 aa17.64■□□□□ 0.42
SDCBP-201ENST00000260130 SLC22A12Q96S37 553 aa17.64■□□□□ 0.42
SDCBP-201ENST00000260130 TDP1Q9NUW8 608 aa17.64■□□□□ 0.42
SDCBP-201ENST00000260130 OBP2AQ9NY56 170 aa17.64■□□□□ 0.42
SDCBP-201ENST00000260130 CKMP06732 381 aa17.64■□□□□ 0.41
SDCBP-201ENST00000260130 USP17L7P0C7H9 530 aa17.64■□□□□ 0.41
SDCBP-201ENST00000260130 PNMA6AP0CW24 399 aaPredicted RBP17.64■□□□□ 0.41
SDCBP-201ENST00000260130 PLA2G4AP47712 749 aa17.64■□□□□ 0.41
SDCBP-201ENST00000260130 ETF1P62495 437 aaKnown RBP17.64■□□□□ 0.41
SDCBP-201ENST00000260130 TRIM67Q6ZTA4 783 aa17.64■□□□□ 0.41
SDCBP-201ENST00000260130 DEPDC1BQ8WUY9 529 aa17.64■□□□□ 0.41
SDCBP-201ENST00000260130 USP13Q92995 863 aaPredicted RBP17.64■□□□□ 0.41
SDCBP-201ENST00000260130 TRMT61BQ9BVS5 477 aaKnown RBP17.64■□□□□ 0.41
SDCBP-201ENST00000260130 SLC2A4RGQ9NR83 387 aa17.64■□□□□ 0.41
SDCBP-201ENST00000260130 TLR8Q9NR97 1041 aaKnown RBP17.64■□□□□ 0.41
SDCBP-201ENST00000260130 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.64■□□□□ 0.41
SDCBP-201ENST00000260130 DAAM1Q9Y4D1 1078 aa17.64■□□□□ 0.41
SDCBP-201ENST00000260130 V9GYY5 206 aaPredicted RBP17.64■□□□□ 0.41
SDCBP-201ENST00000260130 TEX33O43247 280 aa17.63■□□□□ 0.41
SDCBP-201ENST00000260130 BPIFB4P59827 614 aa17.63■□□□□ 0.41
SDCBP-201ENST00000260130 POLR2FP61218 127 aaKnown RBP17.63■□□□□ 0.41
SDCBP-201ENST00000260130 GRM2Q14416 872 aa17.63■□□□□ 0.41
SDCBP-201ENST00000260130 ZNF268Q14587 947 aaPredicted RBP17.63■□□□□ 0.41
SDCBP-201ENST00000260130 KRT222Q8N1A0 295 aa17.63■□□□□ 0.41
SDCBP-201ENST00000260130 NEK11Q8NG66 645 aa17.63■□□□□ 0.41
SDCBP-201ENST00000260130 KCTD13Q8WZ19 329 aa17.63■□□□□ 0.41
SDCBP-201ENST00000260130 SECISBP2LQ93073 1101 aaKnown RBP17.63■□□□□ 0.41
SDCBP-201ENST00000260130 LRRC3BQ96PB8 259 aa17.63■□□□□ 0.41
SDCBP-201ENST00000260130 CCL26Q9Y258 94 aa17.63■□□□□ 0.41
SDCBP-201ENST00000260130 EPHB6O15197 1021 aa17.63■□□□□ 0.41
SDCBP-201ENST00000260130 ZSCAN12O43309 604 aa17.63■□□□□ 0.41
SDCBP-201ENST00000260130 OAS1P00973 400 aaKnown RBP17.63■□□□□ 0.41
SDCBP-201ENST00000260130 TKTL1P51854 596 aa17.63■□□□□ 0.41
SDCBP-201ENST00000260130 MEA1Q16626 185 aa17.63■□□□□ 0.41
SDCBP-201ENST00000260130 HECTD3Q5T447 861 aa17.63■□□□□ 0.41
SDCBP-201ENST00000260130 FBXO38Q6PIJ6 1188 aa17.63■□□□□ 0.41
SDCBP-201ENST00000260130 RNF38Q9H0F5 515 aa17.63■□□□□ 0.41
SDCBP-201ENST00000260130 KIF9Q9HAQ2 790 aa17.63■□□□□ 0.41
SDCBP-201ENST00000260130 LRRC4Q9HBW1 653 aa17.63■□□□□ 0.41
SDCBP-201ENST00000260130 A0A1B0GTH6 734 aa17.62■□□□□ 0.41
SDCBP-201ENST00000260130 CFHP08603 1231 aa17.62■□□□□ 0.41
SDCBP-201ENST00000260130 GPD2P43304 727 aa17.62■□□□□ 0.41
SDCBP-201ENST00000260130 PGFP49763 221 aa17.62■□□□□ 0.41
SDCBP-201ENST00000260130 FCHO2Q0JRZ9 810 aa17.62■□□□□ 0.41
SDCBP-201ENST00000260130 PMF1Q6P1K2 205 aa17.62■□□□□ 0.41
SDCBP-201ENST00000260130 SLC47A2Q86VL8 602 aa17.62■□□□□ 0.41
SDCBP-201ENST00000260130 YAF2Q8IY57 180 aa17.62■□□□□ 0.41
SDCBP-201ENST00000260130 BPIFB1Q8TDL5 484 aa17.62■□□□□ 0.41
SDCBP-201ENST00000260130 NLRC4Q9NPP4 1024 aa17.62■□□□□ 0.41
SDCBP-201ENST00000260130 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.62■□□□□ 0.41
SDCBP-201ENST00000260130 F8VZ95 297 aa17.62■□□□□ 0.41
SDCBP-201ENST00000260130 OLFM2O95897 454 aa17.62■□□□□ 0.41
SDCBP-201ENST00000260130 GDI1P31150 447 aa17.62■□□□□ 0.41
SDCBP-201ENST00000260130 TUBP50607 506 aa17.62■□□□□ 0.41
SDCBP-201ENST00000260130 C1QTNF1Q9BXJ1 281 aa17.62■□□□□ 0.41
SDCBP-201ENST00000260130 BRD9Q9H8M2 597 aa17.62■□□□□ 0.41
SDCBP-201ENST00000260130 WNT16Q9UBV4 365 aa17.62■□□□□ 0.41
SDCBP-201ENST00000260130 ZBED1O96006 694 aa17.61■□□□□ 0.41
SDCBP-201ENST00000260130 PSEN1P49768 467 aa17.61■□□□□ 0.41
SDCBP-201ENST00000260130 SLC7A9P82251 487 aa17.61■□□□□ 0.41
SDCBP-201ENST00000260130 PFKPQ01813 784 aa17.61■□□□□ 0.41
SDCBP-201ENST00000260130 NR1I3Q14994 352 aa17.61■□□□□ 0.41
SDCBP-201ENST00000260130 PM20D1Q6GTS8 502 aa17.61■□□□□ 0.41
SDCBP-201ENST00000260130 DENND1BQ6P3S1 775 aa17.61■□□□□ 0.41
SDCBP-201ENST00000260130 ASIC4Q96FT7 647 aa17.61■□□□□ 0.41
SDCBP-201ENST00000260130 HSFY1Q96LI6 401 aa17.61■□□□□ 0.41
SDCBP-201ENST00000260130 ULBP1Q9BZM6 244 aa17.61■□□□□ 0.41
SDCBP-201ENST00000260130 CCSER2Q9H7U1 834 aa17.61■□□□□ 0.41
SDCBP-201ENST00000260130 NMUR1Q9HB89 426 aa17.61■□□□□ 0.41
SDCBP-201ENST00000260130 FBXL21Q9UKT6 434 aa17.61■□□□□ 0.41
SDCBP-201ENST00000260130 ARHGAP26Q9UNA1 814 aa17.61■□□□□ 0.41
SDCBP-201ENST00000260130 MYH10P35580 1976 aa17.61■□□□□ 0.41
SDCBP-201ENST00000260130 A0A1W2PQH9 124 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 ZNF263O14978 683 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 ARHGAP6O43182 974 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 COCHO43405 550 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 KRT9P35527 623 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 RGS7P49802 495 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 ADIGQ0VDE8 80 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 SCD5Q86SK9 330 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 SIX6OS1Q8N1H7 587 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 IRF7Q92985 503 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 SPAG5Q96R06 1193 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 THG1LQ9NWX6 298 aaKnown RBP17.6■□□□□ 0.41
SDCBP-201ENST00000260130 OSER1Q9NX31 292 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 NAGPAQ9UK23 515 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 PCDHGC3Q9UN70 934 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 OBSL1O75147 1896 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms