RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 CCDC70Q6NSX1 233 aa18.32■□□□□ 0.52
SRSF1-201ENST00000258962 EMC1Q8N766 993 aa18.32■□□□□ 0.52
SRSF1-201ENST00000258962 SPATA18Q8TC71 538 aa18.32■□□□□ 0.52
SRSF1-201ENST00000258962 FNIP1Q8TF40 1166 aa18.32■□□□□ 0.52
SRSF1-201ENST00000258962 SUSD3Q96L08 255 aa18.32■□□□□ 0.52
SRSF1-201ENST00000258962 KLHL5Q96PQ7 755 aa18.32■□□□□ 0.52
SRSF1-201ENST00000258962 AP1M1Q9BXS5 423 aa18.32■□□□□ 0.52
SRSF1-201ENST00000258962 B3GNT5Q9BYG0 378 aa18.32■□□□□ 0.52
SRSF1-201ENST00000258962 FAM50BQ9Y247 325 aa18.32■□□□□ 0.52
SRSF1-201ENST00000258962 EYSQ5T1H1 3165 aa18.32■□□□□ 0.52
SRSF1-201ENST00000258962 PAPSS1O43252 624 aaPredicted RBP18.31■□□□□ 0.52
SRSF1-201ENST00000258962 PSTPIP1O43586 416 aa18.31■□□□□ 0.52
SRSF1-201ENST00000258962 ADH1AP07327 375 aa18.31■□□□□ 0.52
SRSF1-201ENST00000258962 KCNQ1P51787 676 aa18.31■□□□□ 0.52
SRSF1-201ENST00000258962 DLX2Q07687 328 aaPredicted RBP18.31■□□□□ 0.52
SRSF1-201ENST00000258962 PIGHQ14442 188 aaPredicted RBP18.31■□□□□ 0.52
SRSF1-201ENST00000258962 TRNP1Q6NT89 227 aa18.31■□□□□ 0.52
SRSF1-201ENST00000258962 OLFML1Q6UWY5 402 aa18.31■□□□□ 0.52
SRSF1-201ENST00000258962 RHOT1Q8IXI2 618 aa18.31■□□□□ 0.52
SRSF1-201ENST00000258962 CASP10Q92851 521 aa18.31■□□□□ 0.52
SRSF1-201ENST00000258962 LRRC1Q9BTT6 524 aa18.31■□□□□ 0.52
SRSF1-201ENST00000258962 MIS12Q9H081 205 aa18.31■□□□□ 0.52
SRSF1-201ENST00000258962 RXFP1Q9HBX9 757 aa18.31■□□□□ 0.52
SRSF1-201ENST00000258962 CD207Q9UJ71 328 aa18.31■□□□□ 0.52
SRSF1-201ENST00000258962 CDH9Q9ULB4 789 aa18.31■□□□□ 0.52
SRSF1-201ENST00000258962 HCFC2Q9Y5Z7 792 aa18.31■□□□□ 0.52
SRSF1-201ENST00000258962 MYBPHLA2RUH7 354 aa18.3■□□□□ 0.52
SRSF1-201ENST00000258962 XPO1O14980 1071 aaKnown RBP18.3■□□□□ 0.52
SRSF1-201ENST00000258962 TEX28O15482 410 aa18.3■□□□□ 0.52
SRSF1-201ENST00000258962 TBX10O75333 385 aa18.3■□□□□ 0.52
SRSF1-201ENST00000258962 GLP2RO95838 553 aa18.3■□□□□ 0.52
SRSF1-201ENST00000258962 PLA2G4AP47712 749 aa18.3■□□□□ 0.52
SRSF1-201ENST00000258962 RBM10P98175 930 aaKnown RBP18.3■□□□□ 0.52
SRSF1-201ENST00000258962 CLUL1Q15846 466 aa18.3■□□□□ 0.52
SRSF1-201ENST00000258962 LONRF2Q1L5Z9 754 aa18.3■□□□□ 0.52
SRSF1-201ENST00000258962 PTCRAQ6ISU1 281 aaPredicted RBP18.3■□□□□ 0.52
SRSF1-201ENST00000258962 CC2D1AQ6P1N0 951 aaPredicted RBP18.3■□□□□ 0.52
SRSF1-201ENST00000258962 TMEM184AQ6ZMB5 413 aa18.3■□□□□ 0.52
SRSF1-201ENST00000258962 VN1R2Q8NFZ6 395 aa18.3■□□□□ 0.52
SRSF1-201ENST00000258962 DUSP16Q9BY84 665 aa18.3■□□□□ 0.52
SRSF1-201ENST00000258962 CYLDQ9NQC7 956 aa18.3■□□□□ 0.52
SRSF1-201ENST00000258962 CLEC1BQ9P126 229 aa18.3■□□□□ 0.52
SRSF1-201ENST00000258962 FNIP2Q9P278 1114 aa18.3■□□□□ 0.52
SRSF1-201ENST00000258962 RAB21Q9UL25 225 aa18.3■□□□□ 0.52
SRSF1-201ENST00000258962 NR2E1Q9Y466 385 aa18.3■□□□□ 0.52
SRSF1-201ENST00000258962 PATJQ8NI35 1801 aa18.3■□□□□ 0.52
SRSF1-201ENST00000258962 SPDYE4A6NLX3 237 aa18.29■□□□□ 0.52
SRSF1-201ENST00000258962 KRIT1O00522 736 aa18.29■□□□□ 0.52
SRSF1-201ENST00000258962 BEST1O76090 585 aa18.29■□□□□ 0.52
SRSF1-201ENST00000258962 FGFR3P22607 806 aa18.29■□□□□ 0.52
SRSF1-201ENST00000258962 MCM3P25205 808 aa18.29■□□□□ 0.52
SRSF1-201ENST00000258962 PSMA2P25787 234 aa18.29■□□□□ 0.52
SRSF1-201ENST00000258962 MRPS25P82663 173 aaKnown RBP18.29■□□□□ 0.52
SRSF1-201ENST00000258962 RTP2Q5QGT7 225 aa18.29■□□□□ 0.52
SRSF1-201ENST00000258962 SEL1L2Q5TEA6 688 aa18.29■□□□□ 0.52
SRSF1-201ENST00000258962 METTL23Q86XA0 190 aa18.29■□□□□ 0.52
SRSF1-201ENST00000258962 ZDHHC14Q8IZN3 488 aa18.29■□□□□ 0.52
SRSF1-201ENST00000258962 ARFGAP1Q8N6T3 406 aa18.29■□□□□ 0.52
SRSF1-201ENST00000258962 HDAC7Q8WUI4 952 aa18.29■□□□□ 0.52
SRSF1-201ENST00000258962 PIK3R5Q8WYR1 880 aa18.29■□□□□ 0.52
SRSF1-201ENST00000258962 KHSRPQ92945 711 aaKnown RBP eCLIP18.29■□□□□ 0.521e-17■■■□□ 15.3
SRSF1-201ENST00000258962 KRT12Q99456 494 aa18.29■□□□□ 0.52
SRSF1-201ENST00000258962 PKMYT1Q99640 499 aa18.29■□□□□ 0.52
SRSF1-201ENST00000258962 DPP7Q9UHL4 492 aa18.29■□□□□ 0.52
SRSF1-201ENST00000258962 DSEQ9UL01 958 aa18.29■□□□□ 0.52
SRSF1-201ENST00000258962 PCDHB8Q9UN66 801 aa18.29■□□□□ 0.52
SRSF1-201ENST00000258962 TARSL2A2RTX5 802 aaKnown RBP18.28■□□□□ 0.52
SRSF1-201ENST00000258962 BMP1P13497 986 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 NPR3P17342 541 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 HOXB8P17481 243 aaPredicted RBP18.28■□□□□ 0.52
SRSF1-201ENST00000258962 TYMPP19971 482 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 PCSK1P29120 753 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 CDR1P51861 262 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 VSNL1P62760 191 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 SLC6A3Q01959 620 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 KCNC3Q14003 757 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 PSMD5Q16401 504 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 ANKRD54Q6NXT1 300 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 ELMSAN1Q6PJG2 1045 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 PRSS55Q6UWB4 352 aaPredicted RBP18.28■□□□□ 0.52
SRSF1-201ENST00000258962 CLEC20AQ6ZU45 233 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 FAM35AQ86V20 835 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 PIGZQ86VD9 579 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 SCUBE3Q8IX30 993 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 KATNAL2Q8IYT4 538 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 MYCBPAPQ8TBZ2 947 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 CLEC4CQ8WTT0 213 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 SLC22A17Q8WUG5 538 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 PCED1BQ96HM7 432 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 HSFY1Q96LI6 401 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 NAP1L3Q99457 506 aaPredicted RBP18.28■□□□□ 0.52
SRSF1-201ENST00000258962 ACBD6Q9BR61 282 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 MED10Q9BTT4 135 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 KRT82Q9NSB4 513 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 DZANK1Q9NVP4 752 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.28■□□□□ 0.52
SRSF1-201ENST00000258962 TCRBV7S2A1N4TA0A589 114 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 C2CD4BA6NLJ0 364 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 CCDC188H7C350 402 aa18.28■□□□□ 0.52
SRSF1-201ENST00000258962 SYN3O14994 580 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms