RNA–Protein interactions for RNA: ENST00000254351.8

SDC1-201, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC1, Length 3,147 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-201ENST00000254351 DARS2Q6PI48 645 aaKnown RBP14.92□□□□□ -0.02
SDC1-201ENST00000254351 AMIGO2Q86SJ2 522 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 NAT8LQ8N9F0 302 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 MIPOL1Q8TD10 442 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 DGCR14Q96DF8 476 aaKnown RBP14.92□□□□□ -0.02
SDC1-201ENST00000254351 CCDC106Q9BWC9 280 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 ZC3H12CQ9C0D7 883 aaKnown RBP14.92□□□□□ -0.02
SDC1-201ENST00000254351 AVENQ9NQS1 362 aaPredicted RBP14.92□□□□□ -0.02
SDC1-201ENST00000254351 RAB6BQ9NRW1 208 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 KCNK4Q9NYG8 393 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 SLC9A2Q9UBY0 812 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 IP6K2Q9UHH9 426 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 SNCAIPQ9Y6H5 919 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 A0A0B4J269 797 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 TMCC1O94876 653 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 TFAP2AP05549 437 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 APRTP07741 180 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 FAM163BP0C2L3 166 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 PSMA2P25787 234 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 IL1R2P27930 398 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 STX3Q13277 289 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 DMP1Q13316 513 aaPredicted RBP14.92□□□□□ -0.02
SDC1-201ENST00000254351 TDRD10Q5VZ19 366 aaKnown RBP14.92□□□□□ -0.02
SDC1-201ENST00000254351 CIAPIN1Q6FI81 312 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 TRMT10BQ6PF06 316 aaKnown RBP14.92□□□□□ -0.02
SDC1-201ENST00000254351 TMEM130Q8N3G9 435 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 PHTF2Q8N3S3 785 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 GSDMBQ8TAX9 411 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 NCSTNQ92542 709 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 USP13Q92995 863 aaPredicted RBP14.92□□□□□ -0.02
SDC1-201ENST00000254351 TEKT1Q969V4 418 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 DOLKQ9UPQ8 538 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 FARP1Q9Y4F1 1045 aaPredicted RBP14.92□□□□□ -0.02
SDC1-201ENST00000254351 TELO2Q9Y4R8 837 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 HEY1Q9Y5J3 304 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 STK24Q9Y6E0 443 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 PLIN4Q96Q06 1357 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 GOLGA8QA0A0J9YX86 632 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 GOLGA8OA6NCC3 632 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 GOLGA8NF8WBI6 632 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 ATP2B4P23634 1241 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 RPL10P27635 214 aaKnown RBP14.92□□□□□ -0.02
SDC1-201ENST00000254351 CRADDP78560 199 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 NRF1Q16656 503 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 SH3BP5LQ7L8J4 393 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 HACE1Q8IYU2 909 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 ABRAQ8N0Z2 381 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 KCTD6Q8NC69 237 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 SPATA18Q8TC71 538 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 ALKBH8Q96BT7 664 aaKnown RBP14.92□□□□□ -0.02
SDC1-201ENST00000254351 FAM163AQ96GL9 167 aaPredicted RBP14.92□□□□□ -0.02
SDC1-201ENST00000254351 RBM17Q96I25 401 aaKnown RBP14.92□□□□□ -0.02
SDC1-201ENST00000254351 COPS7BQ9H9Q2 264 aaPredicted RBP14.92□□□□□ -0.02
SDC1-201ENST00000254351 MAGED2Q9UNF1 606 aaPredicted RBP14.92□□□□□ -0.02
SDC1-201ENST00000254351 POMPQ9Y244 141 aa14.92□□□□□ -0.02
SDC1-201ENST00000254351 HBS1LQ9Y450 684 aaKnown RBP14.92□□□□□ -0.02
SDC1-201ENST00000254351 H7C0C1 242 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 P4HBP07237 508 aaKnown RBP14.91□□□□□ -0.02
SDC1-201ENST00000254351 SRGAP2CP0DJJ0 459 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 SRGAP2BP0DMP2 458 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 IMPDH2P12268 514 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 RFC1P35251 1148 aaPredicted RBP14.91□□□□□ -0.02
SDC1-201ENST00000254351 ATP5OP48047 213 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 COPAP53621 1224 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 PKNOX1P55347 436 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 NLRP11P59045 1033 aaKnown RBP14.91□□□□□ -0.02
SDC1-201ENST00000254351 CDO1Q16878 200 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 ANKRD20A4Q4UJ75 823 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 SH3D19Q5HYK7 790 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 B3GNT6Q6ZMB0 384 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 TSHZ1Q6ZSZ6 1077 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 NETO2Q8NC67 525 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 GRIN3AQ8TCU5 1115 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 VTI1AQ96AJ9 217 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 FOXP3Q9BZS1 431 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 XAB2Q9HCS7 855 aaKnown RBP14.91□□□□□ -0.02
SDC1-201ENST00000254351 CDH22Q9UJ99 828 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 AFG3L2Q9Y4W6 797 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 C10orf71Q711Q0 1435 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 NEMP1O14524 444 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 CDK4P11802 303 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 CPOXP36551 454 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 SERPINB5P36952 375 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 ALDH1A3P47895 512 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 QARSP47897 775 aaKnown RBP14.91□□□□□ -0.02
SDC1-201ENST00000254351 PSMD7P51665 324 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 GTF2BQ00403 316 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 TBL3Q12788 808 aaKnown RBP14.91□□□□□ -0.02
SDC1-201ENST00000254351 RAB6CQ53S08 254 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 SPDYAQ5MJ70 313 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 UGT2A3Q6UWM9 527 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 FRMD7Q6ZUT3 714 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 TMEM161BQ8NDZ6 487 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 TMIGD2Q96BF3 282 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 PGLYRP2Q96PD5 576 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 RAB6CQ9H0N0 254 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 ZC3H7BQ9UGR2 993 aaKnown RBP14.91□□□□□ -0.02
SDC1-201ENST00000254351 FZD1Q9UP38 647 aa14.91□□□□□ -0.02
SDC1-201ENST00000254351 APOBEC2Q9Y235 224 aaKnown RBP14.91□□□□□ -0.02
SDC1-201ENST00000254351 TESPA1A2RU30 521 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms