RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 CACNA2D1P54289 1103 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 SOX10P56693 466 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 UBXN2AP68543 259 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 CAPSQ13938 189 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 KRT81Q14533 505 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 BBS9Q3SYG4 887 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 GPAT2Q6NUI2 795 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 NUDCD3Q8IVD9 361 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 CROCCP3Q8IVE0 287 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 TNS4Q8IZW8 715 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 PROCA1Q8NCQ7 364 aaPredicted RBP4.31□□□□□ -1.72
UBE4A-201ENST00000252108 OR6Y1Q8NGX8 325 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 UTP4Q969X6 686 aaKnown RBP4.31□□□□□ -1.72
UBE4A-201ENST00000252108 APOPT1Q96IL0 206 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 TBC1D10AQ9BXI6 508 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 ZNF341Q9BYN7 854 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 TLE6Q9H808 572 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 RSAD1Q9HA92 442 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 NPHS2Q9NP85 383 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 CHST7Q9NS84 486 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 HAO1Q9UJM8 370 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 POLIQ9UNA4 740 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 NUB1Q9Y5A7 615 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 USP3Q9Y6I4 520 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 A0A0G2JLL6 359 aaPredicted RBP4.31□□□□□ -1.72
UBE4A-201ENST00000252108 H0Y3Z8 333 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 DNAJC6O75061 913 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 DGAT1O75907 488 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 NR3C2P08235 984 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 IL4RP24394 825 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 TARSP26639 723 aaKnown RBP4.31□□□□□ -1.72
UBE4A-201ENST00000252108 MYL6P60660 151 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 ADAM17P78536 824 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 CNTN2Q02246 1040 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.31□□□□□ -1.72
UBE4A-201ENST00000252108 NBPF12Q5TAG4 269 aaPredicted RBP4.31□□□□□ -1.72
UBE4A-201ENST00000252108 FAM91A1Q658Y4 838 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 PRRT2Q7Z6L0 340 aaPredicted RBP4.31□□□□□ -1.72
UBE4A-201ENST00000252108 RIN3Q8TB24 985 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 FNIP1Q8TF40 1166 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 ZNF75CPQ92670 426 aaPredicted RBP4.31□□□□□ -1.72
UBE4A-201ENST00000252108 HIC2Q96JB3 615 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 KIFC3Q9BVG8 833 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 MFSD1Q9H3U5 465 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 FAM124BQ9H5Z6 455 aaPredicted RBP4.31□□□□□ -1.72
UBE4A-201ENST00000252108 PFDN4Q9NQP4 134 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 NRBP2Q9NSY0 501 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 FAF1Q9UNN5 650 aaPredicted RBP4.31□□□□□ -1.72
UBE4A-201ENST00000252108 L3MBTL1Q9Y468 752 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 TMCC1O94876 653 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 APOA4P06727 396 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 ITGAVP06756 1048 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 HSPA8P11142 646 aaKnown RBP4.31□□□□□ -1.72
UBE4A-201ENST00000252108 PYGBP11216 843 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 CREB1P16220 341 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 ACAT1P24752 427 aaKnown RBP4.31□□□□□ -1.72
UBE4A-201ENST00000252108 CCND2P30279 289 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 INCA1Q0VD86 236 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 ZBTB17Q13105 803 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 LAMB3Q13751 1172 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 TAF1BQ53T94 588 aaPredicted RBP4.31□□□□□ -1.72
UBE4A-201ENST00000252108 XKR4Q5GH76 650 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 TFDP3Q5H9I0 405 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 TXNRD3NBQ6F5E7 133 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 ARCQ7LC44 396 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 POLNQ7Z5Q5 900 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 SULF1Q8IWU6 871 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 ABRAQ8N0Z2 381 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 PRPF31Q8WWY3 499 aaKnown RBP4.31□□□□□ -1.72
UBE4A-201ENST00000252108 C9orf72Q96LT7 481 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 CATSPER2Q96P56 530 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 NUF2Q9BZD4 464 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 PCIF1Q9H4Z3 704 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 HEY2Q9UBP5 337 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 PCDHA10Q9Y5I2 948 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 H7C0C1 242 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 PDLIM1O00151 329 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 HGSO14964 777 aaPredicted RBP4.31□□□□□ -1.72
UBE4A-201ENST00000252108 BIRC5O15392 142 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 RAD17O75943 681 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 CALCAP01258 141 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 RALAP11233 206 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 ETV4P43268 484 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 NAMPTP43490 491 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 ATP5OP48047 213 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 PTDSS1P48651 473 aaKnown RBP4.31□□□□□ -1.72
UBE4A-201ENST00000252108 ROR1Q01973 937 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 STX3Q13277 289 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 EIF4EBP2Q13542 120 aaPredicted RBP4.31□□□□□ -1.72
UBE4A-201ENST00000252108 TRIP13Q15645 432 aaPredicted RBP4.31□□□□□ -1.72
UBE4A-201ENST00000252108 ZBTB6Q15916 424 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 RNASEH2BQ5TBB1 312 aaKnown RBP4.31□□□□□ -1.72
UBE4A-201ENST00000252108 DARS2Q6PI48 645 aaKnown RBP4.31□□□□□ -1.72
UBE4A-201ENST00000252108 ALKAL1Q6UXT8 129 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 ZPBP2Q6X784 338 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 OR5B17Q8NGF7 314 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 ACMSDQ8TDX5 336 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 TTC17Q96AE7 1141 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 E2F7Q96AV8 911 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 ANKRD36BP1Q96IX9 119 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms