RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 HEY1Q9Y5J3 304 aa20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 TEX264Q9Y6I9 313 aa20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 GOLGA8RI6L899 631 aa20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 KCNN4O15554 427 aa20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 EDF1O60869 148 aaKnown RBP20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 GCLCP48506 637 aaPredicted RBP20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 PDK2Q15119 407 aa20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 BOLA3Q53S33 107 aa20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 HHATQ5VTY9 493 aa20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 ZNF467Q7Z7K2 595 aaPredicted RBP20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 MAP7D3Q8IWC1 876 aa20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 LRRC8CQ8TDW0 803 aa20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 FAF2Q96CS3 445 aa20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 KLF6Q99612 283 aaPredicted RBP20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 FAM49AQ9H0Q0 323 aaPredicted RBP20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 C12orf65Q9H3J6 166 aaKnown RBP20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 DPEP3Q9H4B8 488 aa20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 PLEKHA5Q9HAU0 1116 aa20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 TCRBV9S1A1TA0A576 114 aa20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 BTBD19C9JJ37 291 aa20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 KBTBD13C9JR72 458 aa20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 HOXD8P13378 290 aaPredicted RBP20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 NQO1P15559 274 aaKnown RBP20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 ADRA1DP25100 572 aa20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 RBL1P28749 1068 aa20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 SDC4P31431 198 aa20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 GTF2A1P52655 376 aaPredicted RBP20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 HDAC4P56524 1084 aa20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 DUSP28Q4G0W2 176 aa20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 L3MBTL3Q96JM7 780 aaPredicted RBP20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 RAB6BQ9NRW1 208 aa20.35■□□□□ 0.85
CDC42EP1-201ENST00000249014 IGF2BP3O00425 579 aaKnown RBP eCLIP20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 APOL1O14791 398 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 ZWINTO95229 277 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 ATP6V1G2O95670 118 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 TSHRP16473 764 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 YBX3P16989 372 aaKnown RBP eCLIP20.34■□□□□ 0.854e-6■■□□□ 12.3
CDC42EP1-201ENST00000249014 SLC9A4Q6AI14 798 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 PNMA8AQ86V59 439 aaPredicted RBP20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 KIF2BQ8N4N8 673 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 OR6J1Q8NGC5 347 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 TCP10LQ8TDR4 215 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 CLEC4CQ8WTT0 213 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 TEKT4Q8WW24 435 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 MS4A4AQ96JQ5 239 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 TRIM33Q9UPN9 1127 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 DERAQ9Y315 318 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 CHADO15335 359 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 STRNO43815 780 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 GPR32O75388 356 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 YARSP54577 528 aaKnown RBP20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 BCAR1P56945 870 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 SOWAHAQ2M3V2 549 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 KBTBD12Q3ZCT8 623 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 FAXCQ5TGI0 409 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 SLC27A1Q6PCB7 646 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 DPP9Q86TI2 863 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 ZNF276Q8N554 614 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 BANPQ8N9N5 519 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 OR6B3Q8NGW1 331 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 ZNF75CPQ92670 426 aaPredicted RBP20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 RTP4Q96DX8 246 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 MAML3Q96JK9 1138 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 CYTH2Q99418 400 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 SLC17A7Q9P2U7 560 aa20.34■□□□□ 0.85
CDC42EP1-201ENST00000249014 PDCD11Q14690 1871 aaKnown RBP20.33■□□□□ 0.85
CDC42EP1-201ENST00000249014 ATP2A2P16615 1042 aaKnown RBP20.33■□□□□ 0.85
CDC42EP1-201ENST00000249014 TGM2P21980 687 aa20.33■□□□□ 0.85
CDC42EP1-201ENST00000249014 CCDC15Q0P6D6 951 aa20.33■□□□□ 0.85
CDC42EP1-201ENST00000249014 DGKDQ16760 1214 aa20.33■□□□□ 0.85
CDC42EP1-201ENST00000249014 ASRGL1Q7L266 308 aa20.33■□□□□ 0.85
CDC42EP1-201ENST00000249014 CATSPER4Q7RTX7 472 aa20.33■□□□□ 0.85
CDC42EP1-201ENST00000249014 SESTD1Q86VW0 696 aa20.33■□□□□ 0.85
CDC42EP1-201ENST00000249014 USP6NLQ92738 828 aa20.33■□□□□ 0.85
CDC42EP1-201ENST00000249014 KLHL29Q96CT2 875 aa20.33■□□□□ 0.85
CDC42EP1-201ENST00000249014 MAGEB5Q9BZ81 275 aa20.33■□□□□ 0.85
CDC42EP1-201ENST00000249014 PAK5Q9P286 719 aa20.33■□□□□ 0.85
CDC42EP1-201ENST00000249014 SETSIPP0DME0 302 aa20.32■□□□□ 0.84
CDC42EP1-201ENST00000249014 GBP2P32456 591 aaPredicted RBP20.32■□□□□ 0.84
CDC42EP1-201ENST00000249014 ATXN1P54253 815 aaKnown RBP20.32■□□□□ 0.84
CDC42EP1-201ENST00000249014 PPP6R3Q5H9R7 873 aaPredicted RBP20.32■□□□□ 0.84
CDC42EP1-201ENST00000249014 DPY19L2Q6NUT2 758 aa20.32■□□□□ 0.84
CDC42EP1-201ENST00000249014 OTOAQ7RTW8 1153 aa20.32■□□□□ 0.84
CDC42EP1-201ENST00000249014 GPR142Q7Z601 462 aa20.32■□□□□ 0.84
CDC42EP1-201ENST00000249014 TBCBQ99426 244 aa20.32■□□□□ 0.84
CDC42EP1-201ENST00000249014 OSMRQ99650 979 aa20.32■□□□□ 0.84
CDC42EP1-201ENST00000249014 MYLK2Q9H1R3 596 aa20.32■□□□□ 0.84
CDC42EP1-201ENST00000249014 NXF3Q9H4D5 531 aaKnown RBP20.32■□□□□ 0.84
CDC42EP1-201ENST00000249014 HESX1Q9UBX0 185 aa20.32■□□□□ 0.84
CDC42EP1-201ENST00000249014 CHKBQ9Y259 395 aa20.32■□□□□ 0.84
CDC42EP1-201ENST00000249014 WDR91A4D1P6 747 aa20.32■□□□□ 0.84
CDC42EP1-201ENST00000249014 MDM4O15151 490 aa20.32■□□□□ 0.84
CDC42EP1-201ENST00000249014 YWHAGP61981 247 aaKnown RBP eCLIP20.32■□□□□ 0.84
CDC42EP1-201ENST00000249014 YWHAZP63104 245 aaKnown RBP20.32■□□□□ 0.84
CDC42EP1-201ENST00000249014 C9orf57Q5W0N0 161 aa20.32■□□□□ 0.84
CDC42EP1-201ENST00000249014 ALKAL1Q6UXT8 129 aa20.32■□□□□ 0.84
CDC42EP1-201ENST00000249014 PRPF39Q86UA1 669 aaKnown RBP20.32■□□□□ 0.84
CDC42EP1-201ENST00000249014 C7orf31Q8N865 590 aa20.32■□□□□ 0.84
CDC42EP1-201ENST00000249014 SLC44A1Q8WWI5 657 aa20.32■□□□□ 0.84
CDC42EP1-201ENST00000249014 GCOM2Q9BZD3 368 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms