RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 FANCLQ9NW38 375 aa25.63■■□□□ 1.69
SDF2L1-201ENST00000248958 CLIC5Q9NZA1 410 aa25.63■■□□□ 1.69
SDF2L1-201ENST00000248958 ZDBF2Q9HCK1 2354 aa25.62■■□□□ 1.69
SDF2L1-201ENST00000248958 SLC9A3R1O14745 358 aaPredicted RBP25.62■■□□□ 1.69
SDF2L1-201ENST00000248958 CYP26A1O43174 497 aa25.62■■□□□ 1.69
SDF2L1-201ENST00000248958 RALAP11233 206 aa25.62■■□□□ 1.69
SDF2L1-201ENST00000248958 BRD2P25440 801 aaKnown RBP25.62■■□□□ 1.69
SDF2L1-201ENST00000248958 ATP5C1P36542 298 aaKnown RBP25.62■■□□□ 1.69
SDF2L1-201ENST00000248958 ARHGAP44Q17R89 818 aa25.62■■□□□ 1.69
SDF2L1-201ENST00000248958 CPA6Q8N4T0 437 aa25.62■■□□□ 1.69
SDF2L1-201ENST00000248958 UBA3Q8TBC4 463 aa25.62■■□□□ 1.69
SDF2L1-201ENST00000248958 SHC3Q92529 594 aa25.62■■□□□ 1.69
SDF2L1-201ENST00000248958 ATP2A3Q93084 1043 aa25.62■■□□□ 1.69
SDF2L1-201ENST00000248958 BPIFA3Q9BQP9 254 aa25.62■■□□□ 1.69
SDF2L1-201ENST00000248958 SIX2Q9NPC8 291 aa25.62■■□□□ 1.69
SDF2L1-201ENST00000248958 SHISA7A6NL88 538 aa25.61■■□□□ 1.69
SDF2L1-201ENST00000248958 SPECC1L-ADORA2AF8WAN1 911 aa25.61■■□□□ 1.69
SDF2L1-201ENST00000248958 CD72P21854 359 aa25.61■■□□□ 1.69
SDF2L1-201ENST00000248958 CTHP32929 405 aa25.61■■□□□ 1.69
SDF2L1-201ENST00000248958 TKTL1P51854 596 aa25.61■■□□□ 1.69
SDF2L1-201ENST00000248958 ZXDBP98169 803 aa25.61■■□□□ 1.69
SDF2L1-201ENST00000248958 TNK2Q07912 1038 aa25.61■■□□□ 1.69
SDF2L1-201ENST00000248958 NR1H3Q13133 447 aa25.61■■□□□ 1.69
SDF2L1-201ENST00000248958 KRT31Q15323 416 aa25.61■■□□□ 1.69
SDF2L1-201ENST00000248958 PM20D1Q6GTS8 502 aa25.61■■□□□ 1.69
SDF2L1-201ENST00000248958 GJB7Q6PEY0 223 aa25.61■■□□□ 1.69
SDF2L1-201ENST00000248958 SCML4Q8N228 414 aa25.61■■□□□ 1.69
SDF2L1-201ENST00000248958 TTC16Q8NEE8 873 aa25.61■■□□□ 1.69
SDF2L1-201ENST00000248958 SLC35F5Q8WV83 523 aa25.61■■□□□ 1.69
SDF2L1-201ENST00000248958 EXOC4Q96A65 974 aa25.61■■□□□ 1.69
SDF2L1-201ENST00000248958 EBF3Q9H4W6 596 aa25.61■■□□□ 1.69
SDF2L1-201ENST00000248958 HPS4Q9NQG7 708 aa25.61■■□□□ 1.69
SDF2L1-201ENST00000248958 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.61■■□□□ 1.69
SDF2L1-201ENST00000248958 TAB2Q9NYJ8 693 aa25.61■■□□□ 1.69
SDF2L1-201ENST00000248958 DLGAP2Q9P1A6 1054 aa25.61■■□□□ 1.69
SDF2L1-201ENST00000248958 TBC1D14Q9P2M4 693 aa25.61■■□□□ 1.69
SDF2L1-201ENST00000248958 NAGPAQ9UK23 515 aa25.61■■□□□ 1.69
SDF2L1-201ENST00000248958 DNAJC12Q9UKB3 198 aa25.61■■□□□ 1.69
SDF2L1-201ENST00000248958 COL4A3Q01955 1670 aa25.61■■□□□ 1.69
SDF2L1-201ENST00000248958 A0A1W2PQH9 124 aa25.6■■□□□ 1.69
SDF2L1-201ENST00000248958 E2F8A0AVK6 867 aa25.6■■□□□ 1.69
SDF2L1-201ENST00000248958 M0QYV0 167 aa25.6■■□□□ 1.69
SDF2L1-201ENST00000248958 RARGP13631 454 aa25.6■■□□□ 1.69
SDF2L1-201ENST00000248958 TARSP26639 723 aaKnown RBP25.6■■□□□ 1.69
SDF2L1-201ENST00000248958 HOXD11P31277 338 aaPredicted RBP25.6■■□□□ 1.69
SDF2L1-201ENST00000248958 RPS9P46781 194 aaKnown RBP25.6■■□□□ 1.69
SDF2L1-201ENST00000248958 PTPN5P54829 565 aa25.6■■□□□ 1.69
SDF2L1-201ENST00000248958 GOLGA8FQ08AF8 430 aa25.6■■□□□ 1.69
SDF2L1-201ENST00000248958 GOLGA8DPQ0D2H9 430 aa25.6■■□□□ 1.69
SDF2L1-201ENST00000248958 KCNMA1Q12791 1236 aa25.6■■□□□ 1.69
SDF2L1-201ENST00000248958 TRIM68Q6AZZ1 485 aa25.6■■□□□ 1.69
SDF2L1-201ENST00000248958 DTWD2Q8NBA8 298 aa25.6■■□□□ 1.69
SDF2L1-201ENST00000248958 CLDN23Q96B33 292 aa25.6■■□□□ 1.69
SDF2L1-201ENST00000248958 HSFY1Q96LI6 401 aa25.6■■□□□ 1.69
SDF2L1-201ENST00000248958 ZSWIM1Q9BR11 485 aa25.6■■□□□ 1.69
SDF2L1-201ENST00000248958 VPS16Q9H269 839 aa25.6■■□□□ 1.69
SDF2L1-201ENST00000248958 NMUR1Q9HB89 426 aa25.6■■□□□ 1.69
SDF2L1-201ENST00000248958 CNGB3Q9NQW8 809 aa25.6■■□□□ 1.69
SDF2L1-201ENST00000248958 SMPD4Q9NXE4 827 aa25.6■■□□□ 1.69
SDF2L1-201ENST00000248958 TULP2O00295 520 aa25.59■■□□□ 1.69
SDF2L1-201ENST00000248958 NFATC1O95644 943 aa25.59■■□□□ 1.69
SDF2L1-201ENST00000248958 ZBED1O96006 694 aa25.59■■□□□ 1.69
SDF2L1-201ENST00000248958 DCNP07585 359 aaKnown RBP25.59■■□□□ 1.69
SDF2L1-201ENST00000248958 CDK11BP21127 795 aaKnown RBP25.59■■□□□ 1.69
SDF2L1-201ENST00000248958 GNA15P30679 374 aa25.59■■□□□ 1.69
SDF2L1-201ENST00000248958 EML3Q32P44 896 aa25.59■■□□□ 1.69
SDF2L1-201ENST00000248958 ANO6Q4KMQ2 910 aa25.59■■□□□ 1.69
SDF2L1-201ENST00000248958 FKBP15Q5T1M5 1219 aa25.59■■□□□ 1.69
SDF2L1-201ENST00000248958 SCD5Q86SK9 330 aa25.59■■□□□ 1.69
SDF2L1-201ENST00000248958 SIX6OS1Q8N1H7 587 aa25.59■■□□□ 1.69
SDF2L1-201ENST00000248958 ZNF606Q8WXB4 792 aa25.59■■□□□ 1.69
SDF2L1-201ENST00000248958 SECISBP2LQ93073 1101 aaKnown RBP25.59■■□□□ 1.69
SDF2L1-201ENST00000248958 OTUB2Q96DC9 234 aa25.59■■□□□ 1.69
SDF2L1-201ENST00000248958 ZFRQ96KR1 1074 aaKnown RBP25.59■■□□□ 1.69
SDF2L1-201ENST00000248958 IER2Q9BTL4 223 aa25.59■■□□□ 1.69
SDF2L1-201ENST00000248958 ECT2Q9H8V3 914 aa25.59■■□□□ 1.69
SDF2L1-201ENST00000248958 CFAP97Q9P2B7 532 aa25.59■■□□□ 1.69
SDF2L1-201ENST00000248958 LIMA1Q9UHB6 759 aaKnown RBP25.59■■□□□ 1.69
SDF2L1-201ENST00000248958 DNMT3LQ9UJW3 386 aa25.59■■□□□ 1.69
SDF2L1-201ENST00000248958 SH3BP1Q9Y3L3 701 aa25.59■■□□□ 1.69
SDF2L1-201ENST00000248958 MTF2Q9Y483 593 aaPredicted RBP25.59■■□□□ 1.69
SDF2L1-201ENST00000248958 WNT6Q9Y6F9 365 aa25.59■■□□□ 1.69
SDF2L1-201ENST00000248958 SMTNL1A8MU46 457 aa25.58■■□□□ 1.69
SDF2L1-201ENST00000248958 BECN2A8MW95 431 aa25.58■■□□□ 1.69
SDF2L1-201ENST00000248958 ARSAP15289 507 aa25.58■■□□□ 1.69
SDF2L1-201ENST00000248958 USP8P40818 1118 aa25.58■■□□□ 1.69
SDF2L1-201ENST00000248958 PGFP49763 221 aa25.58■■□□□ 1.69
SDF2L1-201ENST00000248958 APBA1Q02410 837 aa25.58■■□□□ 1.69
SDF2L1-201ENST00000248958 NCAPHQ15003 741 aa25.58■■□□□ 1.69
SDF2L1-201ENST00000248958 PRSS33Q8NF86 280 aa25.58■■□□□ 1.69
SDF2L1-201ENST00000248958 TTC8Q8TAM2 541 aa25.58■■□□□ 1.69
SDF2L1-201ENST00000248958 ULBP1Q9BZM6 244 aa25.58■■□□□ 1.69
SDF2L1-201ENST00000248958 OSER1Q9NX31 292 aa25.58■■□□□ 1.69
SDF2L1-201ENST00000248958 NDRG2Q9UN36 371 aaKnown RBP25.58■■□□□ 1.69
SDF2L1-201ENST00000248958 DAAM1Q9Y4D1 1078 aa25.58■■□□□ 1.69
SDF2L1-201ENST00000248958 THAP12O43422 761 aa25.57■■□□□ 1.68
SDF2L1-201ENST00000248958 SOX9P48436 509 aa25.57■■□□□ 1.68
SDF2L1-201ENST00000248958 YWHAGP61981 247 aaKnown RBP eCLIP25.57■■□□□ 1.68
SDF2L1-201ENST00000248958 PTK2Q05397 1052 aa25.57■■□□□ 1.68
SDF2L1-201ENST00000248958 ADIGQ0VDE8 80 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms