RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 CDHR1Q96JP9 859 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 MBOAT7Q96N66 472 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 MRPL1Q9BYD6 325 aaKnown RBP11.97□□□□□ -0.49
SOX9-201ENST00000245479 B3GNT5Q9BYG0 378 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 CAAP1Q9H8G2 361 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 FBXO6Q9NRD1 293 aaPredicted RBP11.97□□□□□ -0.49
SOX9-201ENST00000245479 NOCTQ9UK39 431 aaKnown RBP11.97□□□□□ -0.49
SOX9-201ENST00000245479 PCDHA3Q9Y5H8 950 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 MYH1P12882 1939 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 STRNO43815 780 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 MAPTP10636 758 aaKnown RBP11.97□□□□□ -0.49
SOX9-201ENST00000245479 AQP5P55064 265 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 ZNF200P98182 395 aaPredicted RBP11.97□□□□□ -0.49
SOX9-201ENST00000245479 LAMTOR4Q0VGL1 99 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 MAMLD1Q13495 774 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 LIN52Q52LA3 116 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 ZDHHC24Q6UX98 284 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 CRYGNQ8WXF5 182 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 ART4Q93070 314 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 BORCS6Q96GS4 357 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 PPCSQ9HAB8 311 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 KLRG2A4D1S0 409 aaPredicted RBP11.97□□□□□ -0.49
SOX9-201ENST00000245479 EDF1O60869 148 aaKnown RBP11.97□□□□□ -0.49
SOX9-201ENST00000245479 SLC4A1P02730 911 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 LYNP07948 512 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 RGS2P41220 211 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 USP46P62068 366 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 AP1B1Q10567 949 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 PDK4Q16654 411 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 EFHC1Q5JVL4 640 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 LMO3Q8TAP4 145 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 KCNK16Q96T55 309 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 DRC3Q9H069 523 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 ANKEF1Q9NU02 776 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 PCMTD2Q9NV79 361 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 ADA2Q9NZK5 511 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 CHKBQ9Y259 395 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 RPTORQ8N122 1335 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 TTC36A6NLP5 189 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 AIM2O14862 343 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 DYNC1LI2O43237 492 aaPredicted RBP11.96□□□□□ -0.49
SOX9-201ENST00000245479 STK10O94804 968 aaKnown RBP11.96□□□□□ -0.49
SOX9-201ENST00000245479 SEC24DO94855 1032 aaPredicted RBP11.96□□□□□ -0.49
SOX9-201ENST00000245479 NFICP08651 508 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 ACAT1P24752 427 aaKnown RBP11.96□□□□□ -0.49
SOX9-201ENST00000245479 ALCAMQ13740 583 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 TMEM259Q4ZIN3 620 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 MROH9Q5TGP6 573 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 DSTYKQ6XUX3 929 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 TFAP2BQ92481 460 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 PAFAH2Q99487 392 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 MAGEB5Q9BZ81 275 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 DCLK3Q9C098 648 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 GRHL1Q9NZI5 618 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 HESX1Q9UBX0 185 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 PLIN4Q96Q06 1357 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 GOLGA8CPA6NN73 597 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 SPDYE16A6NNV3 312 aaPredicted RBP11.96□□□□□ -0.49
SOX9-201ENST00000245479 GOLGA8TH3BQL2 631 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 RGS20O76081 388 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 ZBED1O96006 694 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 VAV1P15498 845 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 HSD17B4P51659 736 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 COPAP53621 1224 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 OTOAQ7RTW8 1153 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 CLNKQ7Z7G1 428 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 ABRAQ8N0Z2 381 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 DRAXINQ8NBI3 349 aaPredicted RBP11.96□□□□□ -0.49
SOX9-201ENST00000245479 LZICQ8WZA0 190 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 OXNAD1Q96HP4 312 aaPredicted RBP11.96□□□□□ -0.49
SOX9-201ENST00000245479 GCNAQ96QF7 691 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 NR1H4Q96RI1 486 aaPredicted RBP11.96□□□□□ -0.49
SOX9-201ENST00000245479 GRIP2Q9C0E4 1043 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 VPS11Q9H270 941 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 KCND2Q9NZV8 630 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 HMGXB4Q9UGU5 601 aa11.96□□□□□ -0.49
SOX9-201ENST00000245479 CITO14578 2027 aa11.96□□□□□ -0.5
SOX9-201ENST00000245479 MEI4A8MW99 385 aa11.96□□□□□ -0.5
SOX9-201ENST00000245479 TRIM49D1C9J1S8 452 aa11.96□□□□□ -0.5
SOX9-201ENST00000245479 FAM155BO75949 473 aa11.96□□□□□ -0.5
SOX9-201ENST00000245479 GTF2A2P52657 109 aa11.96□□□□□ -0.5
SOX9-201ENST00000245479 SLFN12LQ6IEE8 588 aa11.96□□□□□ -0.5
SOX9-201ENST00000245479 TRIM67Q6ZTA4 783 aa11.96□□□□□ -0.5
SOX9-201ENST00000245479 RSPH3Q86UC2 560 aa11.96□□□□□ -0.5
SOX9-201ENST00000245479 POU5F2Q8N7G0 328 aa11.96□□□□□ -0.5
SOX9-201ENST00000245479 HASPINQ8TF76 798 aa11.96□□□□□ -0.5
SOX9-201ENST00000245479 GDPD5Q8WTR4 605 aa11.96□□□□□ -0.5
SOX9-201ENST00000245479 AFG1LQ8WV93 481 aa11.96□□□□□ -0.5
SOX9-201ENST00000245479 PGLYRP2Q96PD5 576 aa11.96□□□□□ -0.5
SOX9-201ENST00000245479 CCDC68Q9H2F9 335 aa11.96□□□□□ -0.5
SOX9-201ENST00000245479 UBP1Q9NZI7 540 aa11.96□□□□□ -0.5
SOX9-201ENST00000245479 TAGLN3Q9UI15 199 aa11.96□□□□□ -0.5
SOX9-201ENST00000245479 XPO7Q9UIA9 1087 aaKnown RBP11.96□□□□□ -0.5
SOX9-201ENST00000245479 GSC2O15499 205 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 USP12O75317 370 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 PROSCO94903 275 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 ENO3P13929 434 aaPredicted RBP11.95□□□□□ -0.5
SOX9-201ENST00000245479 TCN1P20061 433 aaPredicted RBP11.95□□□□□ -0.5
SOX9-201ENST00000245479 GARSP41250 739 aaKnown RBP11.95□□□□□ -0.5
SOX9-201ENST00000245479 CDK16Q00536 496 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms