RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 THPOP40225 353 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 COPAP53621 1224 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 SNRPFP62306 86 aaKnown RBP9.61□□□□□ -0.87
COL21A1-201ENST00000244728 BMPR2Q13873 1038 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 PCSK7Q16549 785 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 TMTC4Q5T4D3 741 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 MPZL3Q6UWV2 235 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 SH3BP5LQ7L8J4 393 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 CYP4X1Q8N118 509 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 FHDC1Q9C0D6 1143 aaPredicted RBP9.61□□□□□ -0.87
COL21A1-201ENST00000244728 TRPV6Q9H1D0 765 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 PCDH9Q9HC56 1237 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 ADA2Q9NZK5 511 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 TAGLN3Q9UI15 199 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 KNL1Q8NG31 2342 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 DUOX1Q9NRD9 1551 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 UBA6A0AVT1 1052 aaPredicted RBP9.6□□□□□ -0.87
COL21A1-201ENST00000244728 PDHXO00330 501 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 KLHL2O95198 593 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 ADCYAP1R1P41586 468 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 PRAMEP78395 509 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 NOTUMQ6P988 496 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 HSD17B14Q9BPX1 270 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 GTSE1Q9NYZ3 720 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 HES2Q9Y543 173 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 C5P01031 1676 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 ADGRA3Q8IWK6 1321 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 MEI4A8MW99 385 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 SPAG6O75602 509 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 SMNDC1O75940 238 aaKnown RBP eCLIP9.6□□□□□ -0.87
COL21A1-201ENST00000244728 GPD1P21695 349 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 ACAT1P24752 427 aaKnown RBP9.6□□□□□ -0.87
COL21A1-201ENST00000244728 FOXN2P32314 431 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 ELK3P41970 407 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 SLC1A5Q15758 541 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 PRAMEF19Q5SWL8 479 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 ISLR2Q6UXK2 745 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 FAM228AQ86W67 206 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 SPATA2LQ8IUW3 424 aaPredicted RBP9.6□□□□□ -0.87
COL21A1-201ENST00000244728 CDKL3Q8IVW4 592 aaPredicted RBP9.6□□□□□ -0.87
COL21A1-201ENST00000244728 SHC3Q92529 594 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 RMDN1Q96DB5 314 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 KCNK16Q96T55 309 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 ZCWPW1Q9H0M4 648 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 PLEKHA5Q9HAU0 1116 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 GBA2Q9HCG7 927 aaPredicted RBP9.6□□□□□ -0.87
COL21A1-201ENST00000244728 CHKBQ9Y259 395 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 LGR5O75473 907 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 IL18RAPO95256 599 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 ENO3P13929 434 aaPredicted RBP9.6□□□□□ -0.87
COL21A1-201ENST00000244728 GSTT1P30711 240 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 IL1RL1Q01638 556 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 UGCGQ16739 394 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 FASTKD1Q53R41 847 aaKnown RBP9.6□□□□□ -0.87
COL21A1-201ENST00000244728 LRRC43Q8N309 656 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 TTC39CQ8N584 583 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 POU5F2Q8N7G0 328 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 ZSWIM2Q8NEG5 633 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 SNRNP27Q8WVK2 155 aaKnown RBP9.6□□□□□ -0.87
COL21A1-201ENST00000244728 APOL2Q9BQE5 337 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 AVENQ9NQS1 362 aaPredicted RBP9.6□□□□□ -0.87
COL21A1-201ENST00000244728 SNTG2Q9NY99 539 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 ABI2Q9NYB9 513 aaPredicted RBP9.6□□□□□ -0.87
COL21A1-201ENST00000244728 SAE1Q9UBE0 346 aaPredicted RBP9.6□□□□□ -0.87
COL21A1-201ENST00000244728 ZNF212Q9UDV6 495 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 PRKAG2Q9UGJ0 569 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 FAM237BA0A1B0GVD1 139 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 M0QYT0 321 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 ADRB2P07550 413 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 HSD17B4P51659 736 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 MCL1Q07820 350 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 TMEM132BQ14DG7 1078 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 ACAD11Q709F0 780 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 CLNKQ7Z7G1 428 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 URGCPQ8TCY9 931 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 DNAJB3Q8WWF6 145 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 PPP2R3CQ969Q6 453 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 CMTM5Q96DZ9 223 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 IFT43Q96FT9 208 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 CEP41Q9BYV8 373 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 SP110Q9HB58 689 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 PIH1D1Q9NWS0 290 aaKnown RBP9.6□□□□□ -0.87
COL21A1-201ENST00000244728 DDIT4Q9NX09 232 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 DTNAQ9Y4J8 743 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 PCDHA2Q9Y5H9 948 aa9.6□□□□□ -0.87
COL21A1-201ENST00000244728 MUTP22033 750 aa9.59□□□□□ -0.87
COL21A1-201ENST00000244728 UBA1P22314 1058 aaKnown RBP9.59□□□□□ -0.87
COL21A1-201ENST00000244728 ADORA2AP29274 412 aa9.59□□□□□ -0.87
COL21A1-201ENST00000244728 STX1BP61266 288 aa9.59□□□□□ -0.87
COL21A1-201ENST00000244728 CCDC15Q0P6D6 951 aa9.59□□□□□ -0.87
COL21A1-201ENST00000244728 FAAP100Q0VG06 881 aa9.59□□□□□ -0.87
COL21A1-201ENST00000244728 RAB44Q7Z6P3 723 aaPredicted RBP9.59□□□□□ -0.87
COL21A1-201ENST00000244728 PLEKHH3Q7Z736 793 aa9.59□□□□□ -0.87
COL21A1-201ENST00000244728 TMC2Q8TDI7 906 aa9.59□□□□□ -0.87
COL21A1-201ENST00000244728 SEPT5Q99719 369 aaPredicted RBP9.59□□□□□ -0.87
COL21A1-201ENST00000244728 EPAS1Q99814 870 aa9.59□□□□□ -0.87
COL21A1-201ENST00000244728 CCDC134Q9H6E4 229 aa9.59□□□□□ -0.87
COL21A1-201ENST00000244728 ARL8BQ9NVJ2 186 aa9.59□□□□□ -0.87
COL21A1-201ENST00000244728 KPNA7A9QM74 516 aa9.59□□□□□ -0.87
COL21A1-201ENST00000244728 TPBGLP0DKB5 382 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms