RNA–Protein interactions for RNA: ENST00000244070.7

PPP4R1L-201, Transcript of protein phosphatase 4 regulatory subunit 1 like (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene PPP4R1L, Length 1,474 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1L-201ENST00000244070 EHD2Q9NZN4 543 aa12.22□□□□□ -0.45
PPP4R1L-201ENST00000244070 STK17AQ9UEE5 414 aa12.22□□□□□ -0.45
PPP4R1L-201ENST00000244070 PCDHB13Q9Y5F0 798 aa12.22□□□□□ -0.45
PPP4R1L-201ENST00000244070 CLDN5O00501 218 aa12.21□□□□□ -0.45
PPP4R1L-201ENST00000244070 PRPF6O94906 941 aaKnown RBP12.21□□□□□ -0.45
PPP4R1L-201ENST00000244070 BMP15O95972 392 aa12.21□□□□□ -0.45
PPP4R1L-201ENST00000244070 NDUFV2P19404 249 aa12.21□□□□□ -0.45
PPP4R1L-201ENST00000244070 GAD2Q05329 585 aa12.21□□□□□ -0.45
PPP4R1L-201ENST00000244070 NUMA1Q14980 2115 aa12.21□□□□□ -0.45
PPP4R1L-201ENST00000244070 SOWAHCQ53LP3 525 aaPredicted RBP12.21□□□□□ -0.45
PPP4R1L-201ENST00000244070 C10orf76Q5T2E6 689 aa12.21□□□□□ -0.45
PPP4R1L-201ENST00000244070 TDRD10Q5VZ19 366 aaKnown RBP12.21□□□□□ -0.45
PPP4R1L-201ENST00000244070 EGFLAMQ63HQ2 1017 aa12.21□□□□□ -0.45
PPP4R1L-201ENST00000244070 SLC36A4Q6YBV0 504 aa12.21□□□□□ -0.45
PPP4R1L-201ENST00000244070 DDX42Q86XP3 938 aaKnown RBP eCLIP12.21□□□□□ -0.45
PPP4R1L-201ENST00000244070 TMEM25Q86YD3 366 aa12.21□□□□□ -0.45
PPP4R1L-201ENST00000244070 BBS7Q8IWZ6 715 aa12.21□□□□□ -0.45
PPP4R1L-201ENST00000244070 PNPLA1Q8N8W4 532 aa12.21□□□□□ -0.45
PPP4R1L-201ENST00000244070 TRIML1Q8N9V2 468 aa12.21□□□□□ -0.45
PPP4R1L-201ENST00000244070 HSPA12BQ96MM6 686 aa12.21□□□□□ -0.45
PPP4R1L-201ENST00000244070 SLITRK1Q96PX8 696 aa12.21□□□□□ -0.45
PPP4R1L-201ENST00000244070 MMS19Q96T76 1030 aa12.21□□□□□ -0.45
PPP4R1L-201ENST00000244070 B3GNT5Q9BYG0 378 aa12.21□□□□□ -0.45
PPP4R1L-201ENST00000244070 SLC6A17Q9H1V8 727 aa12.21□□□□□ -0.45
PPP4R1L-201ENST00000244070 CCSER2Q9H7U1 834 aa12.21□□□□□ -0.45
PPP4R1L-201ENST00000244070 TBC1D14Q9P2M4 693 aa12.21□□□□□ -0.45
PPP4R1L-201ENST00000244070 CYP8B1Q9UNU6 501 aa12.21□□□□□ -0.45
PPP4R1L-201ENST00000244070 TMEM131Q92545 1883 aa12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 CST3P01034 146 aaPredicted RBP12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 TNNC2P02585 160 aa12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 FTH1P19P0C7X4 201 aa12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 IDEP14735 1019 aa12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 PTPN1P18031 435 aaKnown RBP12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 NTSR1P30989 418 aa12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 GNL1P36915 607 aaPredicted RBP12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 TRIP6Q15654 476 aaKnown RBP12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 DUOXA2Q1HG44 320 aa12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 SV2BQ7L1I2 683 aa12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 TRAPPC11Q7Z392 1133 aa12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 TRMT11Q7Z4G4 463 aaKnown RBP12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 SCAMP5Q8TAC9 235 aa12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 KCNV2Q8TDN2 545 aa12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 ADAMTS14Q8WXS8 1223 aa12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 OTUB2Q96DC9 234 aa12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 CLIC6Q96NY7 704 aa12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 TRIM9Q9C026 710 aa12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 ELOVL4Q9GZR5 314 aa12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 SNX25Q9H3E2 840 aa12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 DEC1Q9P2X7 70 aa12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 CHORDC1Q9UHD1 332 aaPredicted RBP12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 FBXO2Q9UK22 296 aaPredicted RBP12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 STARD13Q9Y3M8 1113 aa12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 R3HCC1Q9Y3T6 440 aaKnown RBP12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 CLIC4Q9Y696 253 aa12.21□□□□□ -0.46
PPP4R1L-201ENST00000244070 ATMQ13315 3056 aa12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 CKAP5Q14008 2032 aa12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 KNTC1P50748 2209 aa12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 MGAQ8IWI9 3026 aa12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 A0A087X0B3 334 aa12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 A0A1W2PQD8 194 aa12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 ZNF233A6NK53 670 aa12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 TACC1O75410 805 aa12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 YWHAQP27348 245 aa12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 RDXP35241 583 aaKnown RBP12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 HOXD13P35453 343 aa12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 PGFP49763 221 aa12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 ALCAMQ13740 583 aa12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 COL28A1Q2UY09 1125 aa12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 ANO4Q32M45 955 aa12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 RRAGBQ5VZM2 374 aa12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 BTBD8Q5XKL5 378 aa12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 RABEPKQ7Z6M1 372 aa12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 PDZD3Q86UT5 571 aa12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 WDR49Q8IV35 697 aa12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 NUP93Q8N1F7 819 aa12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 OR6B3Q8NGW1 331 aa12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 IPO4Q8TEX9 1081 aaKnown RBP12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 HPS3Q969F9 1004 aa12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 FBXO32Q969P5 355 aa12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 KCNK16Q96T55 309 aa12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 SPHK2Q9NRA0 654 aa12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 RAD54BQ9Y620 910 aa12.2□□□□□ -0.46
PPP4R1L-201ENST00000244070 MAST4O15021 2626 aa12.19□□□□□ -0.46
PPP4R1L-201ENST00000244070 PRRT4C9JH25 899 aa12.19□□□□□ -0.46
PPP4R1L-201ENST00000244070 GREM1O60565 184 aa12.19□□□□□ -0.46
PPP4R1L-201ENST00000244070 SYPP08247 313 aa12.19□□□□□ -0.46
PPP4R1L-201ENST00000244070 IRF1P10914 325 aa12.19□□□□□ -0.46
PPP4R1L-201ENST00000244070 GRIK2Q13002 908 aa12.19□□□□□ -0.46
PPP4R1L-201ENST00000244070 SLC14A1Q13336 389 aa12.19□□□□□ -0.46
PPP4R1L-201ENST00000244070 HNRNPDQ14103 355 aaKnown RBP12.19□□□□□ -0.46
PPP4R1L-201ENST00000244070 PLEKHG6Q3KR16 790 aa12.19□□□□□ -0.46
PPP4R1L-201ENST00000244070 HECTD3Q5T447 861 aa12.19□□□□□ -0.46
PPP4R1L-201ENST00000244070 SNX30Q5VWJ9 437 aa12.19□□□□□ -0.46
PPP4R1L-201ENST00000244070 LARP1BQ659C4 914 aaKnown RBP12.19□□□□□ -0.46
PPP4R1L-201ENST00000244070 CCNI2Q6ZMN8 369 aaPredicted RBP12.19□□□□□ -0.46
PPP4R1L-201ENST00000244070 TOGARAM2Q6ZUX3 1019 aa12.19□□□□□ -0.46
PPP4R1L-201ENST00000244070 BRAPQ7Z569 592 aa12.19□□□□□ -0.46
PPP4R1L-201ENST00000244070 NAXDQ8IW45 347 aa12.19□□□□□ -0.46
PPP4R1L-201ENST00000244070 B3GALNT2Q8NCR0 500 aa12.19□□□□□ -0.46
PPP4R1L-201ENST00000244070 MDM1Q8TC05 714 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms