RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 DESP17661 470 aa19.29■□□□□ 0.68
HOXC11-201ENST00000243082 RPL22P35268 128 aaKnown RBP19.29■□□□□ 0.68
HOXC11-201ENST00000243082 MAGEA4P43358 317 aa19.29■□□□□ 0.68
HOXC11-201ENST00000243082 ATXN1P54253 815 aaKnown RBP19.29■□□□□ 0.68
HOXC11-201ENST00000243082 PPARDQ03181 441 aa19.29■□□□□ 0.68
HOXC11-201ENST00000243082 LPIN1Q14693 890 aa19.29■□□□□ 0.68
HOXC11-201ENST00000243082 LONRF1Q17RB8 773 aa19.29■□□□□ 0.68
HOXC11-201ENST00000243082 VSIG1Q86XK7 387 aa19.29■□□□□ 0.68
HOXC11-201ENST00000243082 PQLC3Q8N755 202 aa19.29■□□□□ 0.68
HOXC11-201ENST00000243082 PCSK9Q8NBP7 692 aaKnown RBP19.29■□□□□ 0.68
HOXC11-201ENST00000243082 C9orf72Q96LT7 481 aa19.29■□□□□ 0.68
HOXC11-201ENST00000243082 CRTAC1Q9NQ79 661 aa19.29■□□□□ 0.68
HOXC11-201ENST00000243082 DDX43Q9NXZ2 648 aaKnown RBP19.29■□□□□ 0.68
HOXC11-201ENST00000243082 CEP350Q5VT06 3117 aa19.29■□□□□ 0.68
HOXC11-201ENST00000243082 NPR3P17342 541 aa19.29■□□□□ 0.68
HOXC11-201ENST00000243082 ADCY1Q08828 1119 aa19.29■□□□□ 0.68
HOXC11-201ENST00000243082 TRIM71Q2Q1W2 868 aaKnown RBP19.29■□□□□ 0.68
HOXC11-201ENST00000243082 ANKRD20A8PQ5CZ79 823 aa19.29■□□□□ 0.68
HOXC11-201ENST00000243082 MDH1BQ5I0G3 518 aa19.29■□□□□ 0.68
HOXC11-201ENST00000243082 EFHC1Q5JVL4 640 aa19.29■□□□□ 0.68
HOXC11-201ENST00000243082 ERMARDQ5T6L9 678 aa19.29■□□□□ 0.68
HOXC11-201ENST00000243082 CEP128Q6ZU80 1094 aa19.29■□□□□ 0.68
HOXC11-201ENST00000243082 PLD5Q8N7P1 536 aa19.29■□□□□ 0.68
HOXC11-201ENST00000243082 PCDH19Q8TAB3 1148 aa19.29■□□□□ 0.68
HOXC11-201ENST00000243082 BCAS4Q8TDM0 211 aa19.29■□□□□ 0.68
HOXC11-201ENST00000243082 NDRG1Q92597 394 aaKnown RBP19.29■□□□□ 0.68
HOXC11-201ENST00000243082 PRCCQ92733 491 aaPredicted RBP19.29■□□□□ 0.68
HOXC11-201ENST00000243082 P3H4Q92791 437 aa19.29■□□□□ 0.68
HOXC11-201ENST00000243082 PAAF1Q9BRP4 392 aa19.29■□□□□ 0.68
HOXC11-201ENST00000243082 RABEP2Q9H5N1 569 aa19.29■□□□□ 0.68
HOXC11-201ENST00000243082 GPBP1L1Q9HC44 474 aaPredicted RBP19.29■□□□□ 0.68
HOXC11-201ENST00000243082 TRMT13Q9NUP7 481 aaKnown RBP19.29■□□□□ 0.68
HOXC11-201ENST00000243082 SHOC2Q9UQ13 582 aa19.29■□□□□ 0.68
HOXC11-201ENST00000243082 CASTOR2A6NHX0 329 aa19.28■□□□□ 0.68
HOXC11-201ENST00000243082 TCEA3O75764 348 aa19.28■□□□□ 0.68
HOXC11-201ENST00000243082 CDR1P51861 262 aa19.28■□□□□ 0.68
HOXC11-201ENST00000243082 ADIGQ0VDE8 80 aa19.28■□□□□ 0.68
HOXC11-201ENST00000243082 PTK7Q13308 1070 aa19.28■□□□□ 0.68
HOXC11-201ENST00000243082 ITGA7Q13683 1181 aa19.28■□□□□ 0.68
HOXC11-201ENST00000243082 UPP1Q16831 310 aa19.28■□□□□ 0.68
HOXC11-201ENST00000243082 MAP3K21Q5TCX8 1036 aa19.28■□□□□ 0.68
HOXC11-201ENST00000243082 CLEC20AQ6ZU45 233 aa19.28■□□□□ 0.68
HOXC11-201ENST00000243082 TMEM86AQ8N2M4 240 aa19.28■□□□□ 0.68
HOXC11-201ENST00000243082 FAM71DQ8N9W8 422 aa19.28■□□□□ 0.68
HOXC11-201ENST00000243082 FAF2Q96CS3 445 aa19.28■□□□□ 0.68
HOXC11-201ENST00000243082 SERPINB12Q96P63 405 aa19.28■□□□□ 0.68
HOXC11-201ENST00000243082 SAYSD1Q9NPB0 183 aa19.28■□□□□ 0.68
HOXC11-201ENST00000243082 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.28■□□□□ 0.68
HOXC11-201ENST00000243082 CALCOCO1Q9P1Z2 691 aa19.28■□□□□ 0.68
HOXC11-201ENST00000243082 TIMM13Q9Y5L4 95 aaPredicted RBP19.28■□□□□ 0.68
HOXC11-201ENST00000243082 A0A0U1RQF3 1178 aa19.27■□□□□ 0.68
HOXC11-201ENST00000243082 NDC80O14777 642 aa19.27■□□□□ 0.68
HOXC11-201ENST00000243082 RPL9P32969 192 aaKnown RBP19.27■□□□□ 0.68
HOXC11-201ENST00000243082 MMP13P45452 471 aa19.27■□□□□ 0.68
HOXC11-201ENST00000243082 LHX1P48742 406 aa19.27■□□□□ 0.68
HOXC11-201ENST00000243082 CTCFP49711 727 aaPredicted RBP19.27■□□□□ 0.68
HOXC11-201ENST00000243082 RAB27AP51159 221 aa19.27■□□□□ 0.68
HOXC11-201ENST00000243082 SLC8A3P57103 927 aa19.27■□□□□ 0.68
HOXC11-201ENST00000243082 SLC9A4Q6AI14 798 aa19.27■□□□□ 0.68
HOXC11-201ENST00000243082 C1orf228Q6PIY5 440 aa19.27■□□□□ 0.68
HOXC11-201ENST00000243082 PCGF5Q86SE9 256 aa19.27■□□□□ 0.68
HOXC11-201ENST00000243082 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.27■□□□□ 0.68
HOXC11-201ENST00000243082 KCTD13Q8WZ19 329 aa19.27■□□□□ 0.68
HOXC11-201ENST00000243082 CPT1BQ92523 772 aa19.27■□□□□ 0.68
HOXC11-201ENST00000243082 ZNF670Q9BS34 389 aa19.27■□□□□ 0.68
HOXC11-201ENST00000243082 SRRDQ9UH36 339 aa19.27■□□□□ 0.68
HOXC11-201ENST00000243082 L1CAMP32004 1257 aa19.27■□□□□ 0.67
HOXC11-201ENST00000243082 MATKP42679 507 aa19.27■□□□□ 0.67
HOXC11-201ENST00000243082 DPYSL2Q16555 572 aa19.27■□□□□ 0.67
HOXC11-201ENST00000243082 FAM26DQ5JW98 314 aa19.27■□□□□ 0.67
HOXC11-201ENST00000243082 DSTYKQ6XUX3 929 aa19.27■□□□□ 0.67
HOXC11-201ENST00000243082 B4GALNT4Q76KP1 1039 aa19.27■□□□□ 0.67
HOXC11-201ENST00000243082 ZC3H18Q86VM9 953 aaKnown RBP19.27■□□□□ 0.67
HOXC11-201ENST00000243082 NAT8LQ8N9F0 302 aa19.27■□□□□ 0.67
HOXC11-201ENST00000243082 SYT15Q9BQS2 421 aa19.27■□□□□ 0.67
HOXC11-201ENST00000243082 MAGEB5Q9BZ81 275 aa19.27■□□□□ 0.67
HOXC11-201ENST00000243082 THSD7BQ9C0I4 1608 aa19.27■□□□□ 0.67
HOXC11-201ENST00000243082 EPN3Q9H201 632 aa19.27■□□□□ 0.67
HOXC11-201ENST00000243082 CNOT10Q9H9A5 744 aaKnown RBP19.27■□□□□ 0.67
HOXC11-201ENST00000243082 DDX20Q9UHI6 824 aaKnown RBP19.27■□□□□ 0.67
HOXC11-201ENST00000243082 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.27■□□□□ 0.67
HOXC11-201ENST00000243082 ZNF487B1APH4 448 aa19.26■□□□□ 0.67
HOXC11-201ENST00000243082 APOL1O14791 398 aa19.26■□□□□ 0.67
HOXC11-201ENST00000243082 TGM2P21980 687 aa19.26■□□□□ 0.67
HOXC11-201ENST00000243082 STIP1P31948 543 aaKnown RBP19.26■□□□□ 0.67
HOXC11-201ENST00000243082 NDUFV1P49821 464 aa19.26■□□□□ 0.67
HOXC11-201ENST00000243082 NRLP54845 237 aa19.26■□□□□ 0.67
HOXC11-201ENST00000243082 MRPS5P82675 430 aaKnown RBP19.26■□□□□ 0.67
HOXC11-201ENST00000243082 ROR1Q01973 937 aa19.26■□□□□ 0.67
HOXC11-201ENST00000243082 FASTKD3Q14CZ7 662 aaKnown RBP19.26■□□□□ 0.67
HOXC11-201ENST00000243082 ANKRD22Q5VYY1 191 aa19.26■□□□□ 0.67
HOXC11-201ENST00000243082 DARS2Q6PI48 645 aaKnown RBP19.26■□□□□ 0.67
HOXC11-201ENST00000243082 STRADAQ7RTN6 431 aa19.26■□□□□ 0.67
HOXC11-201ENST00000243082 PPIL6Q8IXY8 311 aa19.26■□□□□ 0.67
HOXC11-201ENST00000243082 DEFB106AQ8N104 65 aa19.26■□□□□ 0.67
HOXC11-201ENST00000243082 RNF169Q8NCN4 708 aa19.26■□□□□ 0.67
HOXC11-201ENST00000243082 MDM1Q8TC05 714 aa19.26■□□□□ 0.67
HOXC11-201ENST00000243082 ADAM2Q99965 735 aa19.26■□□□□ 0.67
HOXC11-201ENST00000243082 MED10Q9BTT4 135 aa19.26■□□□□ 0.67
HOXC11-201ENST00000243082 MTMR10Q9NXD2 777 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms