RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 MICALL2Q8IY33 904 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 CENPIQ92674 756 aaPredicted RBP14.28□□□□□ -0.12
TARDBP-201ENST00000240185 PRDM5Q9NQX1 630 aaPredicted RBP14.28□□□□□ -0.12
TARDBP-201ENST00000240185 NMRK1Q9NWW6 199 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 PRKAG2Q9UGJ0 569 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 SLC24A2Q9UI40 661 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 NAGPAQ9UK23 515 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 DUSP10Q9Y6W6 482 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 BTN3A3O00478 584 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 FSBPO95073 299 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 MAPKAPK2P49137 400 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 TRIM32Q13049 653 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 ZNF284Q2VY69 593 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 PAPD7Q5XG87 772 aaKnown RBP14.28□□□□□ -0.12
TARDBP-201ENST00000240185 UGT3A1Q6NUS8 523 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 FIG4Q92562 907 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 PIGUQ9H490 435 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 CATSPERBQ9H7T0 1116 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.28□□□□□ -0.12
TARDBP-201ENST00000240185 ADCY6O43306 1168 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 CYBBP04839 570 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 ELF3P78545 371 aaPredicted RBP14.28□□□□□ -0.12
TARDBP-201ENST00000240185 SFSWAPQ12872 951 aaKnown RBP14.28□□□□□ -0.12
TARDBP-201ENST00000240185 TSNQ15631 228 aaKnown RBP14.28□□□□□ -0.12
TARDBP-201ENST00000240185 ALX1Q15699 326 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 TTLL9Q3SXZ7 439 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 MRNIPQ6NTE8 343 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 C11orf63Q6NUN7 778 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 ZNF544Q6NX49 715 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 MZT2BQ6NZ67 158 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 ERAP2Q6P179 960 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 USP49Q70CQ1 688 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 SLC7A14Q8TBB6 771 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 PPP1R14BQ96C90 147 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 PPP1R10Q96QC0 940 aaKnown RBP14.28□□□□□ -0.12
TARDBP-201ENST00000240185 CROTQ9UKG9 612 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 A0A087X0T9 212 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 LSM1O15116 133 aaKnown RBP14.28□□□□□ -0.12
TARDBP-201ENST00000240185 EIF3DO15371 548 aaKnown RBP eCLIP14.28□□□□□ -0.12
TARDBP-201ENST00000240185 ANXA9O76027 345 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 MT-CO1P00395 513 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 FAM228BP0C875 321 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 TTKP33981 857 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 DCAF6Q58WW2 860 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 FAM228AQ86W67 206 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 ZNF677Q86XU0 584 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 POC5Q8NA72 575 aa14.28□□□□□ -0.12
TARDBP-201ENST00000240185 SDR42E2A6NKP2 422 aa14.27□□□□□ -0.12
TARDBP-201ENST00000240185 POLRMTO00411 1230 aaKnown RBP14.27□□□□□ -0.12
TARDBP-201ENST00000240185 CBX6O95503 412 aa14.27□□□□□ -0.12
TARDBP-201ENST00000240185 PDGFRBP09619 1106 aa14.27□□□□□ -0.12
TARDBP-201ENST00000240185 ETFBP38117 255 aa14.27□□□□□ -0.12
TARDBP-201ENST00000240185 POLD3Q15054 466 aaPredicted RBP14.27□□□□□ -0.12
TARDBP-201ENST00000240185 PREPLQ4J6C6 727 aaPredicted RBP14.27□□□□□ -0.12
TARDBP-201ENST00000240185 FOXR1Q6PIV2 292 aa14.27□□□□□ -0.12
TARDBP-201ENST00000240185 ARHGAP27Q6ZUM4 889 aa14.27□□□□□ -0.12
TARDBP-201ENST00000240185 ZNF614Q8N883 585 aa14.27□□□□□ -0.12
TARDBP-201ENST00000240185 ATXN2LQ8WWM7 1075 aaKnown RBP14.27□□□□□ -0.12
TARDBP-201ENST00000240185 OXNAD1Q96HP4 312 aaPredicted RBP14.27□□□□□ -0.12
TARDBP-201ENST00000240185 SH2D3AQ9BRG2 576 aa14.27□□□□□ -0.12
TARDBP-201ENST00000240185 C9orf16Q9BUW7 83 aa14.27□□□□□ -0.12
TARDBP-201ENST00000240185 TIPINQ9BVW5 301 aa14.27□□□□□ -0.12
TARDBP-201ENST00000240185 CRLS1Q9UJA2 301 aa14.27□□□□□ -0.12
TARDBP-201ENST00000240185 R3HDM2Q9Y2K5 976 aaKnown RBP14.27□□□□□ -0.12
TARDBP-201ENST00000240185 HLA-DRAP01903 254 aa14.27□□□□□ -0.12
TARDBP-201ENST00000240185 ME2P23368 584 aa14.27□□□□□ -0.12
TARDBP-201ENST00000240185 HK2P52789 917 aa14.27□□□□□ -0.12
TARDBP-201ENST00000240185 KLHL24Q6TFL4 600 aa14.27□□□□□ -0.12
TARDBP-201ENST00000240185 CASP12Q6UXS9 341 aa14.27□□□□□ -0.12
TARDBP-201ENST00000240185 POU5F2Q8N7G0 328 aa14.27□□□□□ -0.12
TARDBP-201ENST00000240185 B3GALNT2Q8NCR0 500 aa14.27□□□□□ -0.12
TARDBP-201ENST00000240185 RNF145Q96MT1 663 aa14.27□□□□□ -0.12
TARDBP-201ENST00000240185 MUC3BQ9H195 1237 aa14.27□□□□□ -0.12
TARDBP-201ENST00000240185 PLGRKTQ9HBL7 147 aa14.27□□□□□ -0.12
TARDBP-201ENST00000240185 BSDC1Q9NW68 430 aaPredicted RBP14.27□□□□□ -0.12
TARDBP-201ENST00000240185 NAALADL1Q9UQQ1 740 aa14.27□□□□□ -0.12
TARDBP-201ENST00000240185 A0A1W2PRG6 482 aa14.27□□□□□ -0.13
TARDBP-201ENST00000240185 DARSP14868 501 aaKnown RBP14.27□□□□□ -0.13
TARDBP-201ENST00000240185 JAK1P23458 1154 aa14.27□□□□□ -0.13
TARDBP-201ENST00000240185 GTF2H1P32780 548 aa14.27□□□□□ -0.13
TARDBP-201ENST00000240185 BOLA3Q53S33 107 aa14.27□□□□□ -0.13
TARDBP-201ENST00000240185 SDE2Q6IQ49 451 aa14.27□□□□□ -0.13
TARDBP-201ENST00000240185 CYP2R1Q6VVX0 501 aa14.27□□□□□ -0.13
TARDBP-201ENST00000240185 DENND5BQ6ZUT9 1274 aa14.27□□□□□ -0.13
TARDBP-201ENST00000240185 ABCB10Q9NRK6 738 aa14.27□□□□□ -0.13
TARDBP-201ENST00000240185 GUCY1B2O75343 617 aa14.27□□□□□ -0.13
TARDBP-201ENST00000240185 CLTBP09497 229 aa14.27□□□□□ -0.13
TARDBP-201ENST00000240185 GJB7Q6PEY0 223 aa14.27□□□□□ -0.13
TARDBP-201ENST00000240185 TCAIMQ8N3R3 496 aa14.27□□□□□ -0.13
TARDBP-201ENST00000240185 SPPL2AQ8TCT8 520 aa14.27□□□□□ -0.13
TARDBP-201ENST00000240185 RIBC2Q9H4K1 309 aa14.27□□□□□ -0.13
TARDBP-201ENST00000240185 COPS7BQ9H9Q2 264 aaPredicted RBP14.27□□□□□ -0.13
TARDBP-201ENST00000240185 TMEM165Q9HC07 324 aa14.27□□□□□ -0.13
TARDBP-201ENST00000240185 RAD18Q9NS91 495 aa14.27□□□□□ -0.13
TARDBP-201ENST00000240185 FOSL2P15408 326 aa14.26□□□□□ -0.13
TARDBP-201ENST00000240185 PECAM1P16284 738 aaPredicted RBP14.26□□□□□ -0.13
TARDBP-201ENST00000240185 WARSP23381 471 aaKnown RBP14.26□□□□□ -0.13
TARDBP-201ENST00000240185 SRBD1Q8N5C6 995 aaKnown RBP14.26□□□□□ -0.13
TARDBP-201ENST00000240185 CCDC33Q8N5R6 958 aa14.26□□□□□ -0.13
TARDBP-201ENST00000240185 NACC2Q96BF6 587 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms