RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 E2F4Q16254 413 aa7.67□□□□□ -1.18
MED28-201ENST00000237380 ADCK5Q3MIX3 580 aa7.67□□□□□ -1.18
MED28-201ENST00000237380 NEK10Q6ZWH5 1172 aa7.67□□□□□ -1.18
MED28-201ENST00000237380 RNASE11Q8TAA1 199 aaKnown RBP7.67□□□□□ -1.18
MED28-201ENST00000237380 PSMA8Q8TAA3 256 aa7.67□□□□□ -1.18
MED28-201ENST00000237380 TUBGCP3Q96CW5 907 aa7.67□□□□□ -1.18
MED28-201ENST00000237380 RIPOR3Q96MK2 946 aa7.67□□□□□ -1.18
MED28-201ENST00000237380 TBCDQ9BTW9 1192 aa7.67□□□□□ -1.18
MED28-201ENST00000237380 SRP72O76094 671 aaKnown RBP7.67□□□□□ -1.18
MED28-201ENST00000237380 PPIGQ13427 754 aaKnown RBP eCLIP7.67□□□□□ -1.183e-8■□□□□ 10.6
MED28-201ENST00000237380 SUZ12Q15022 739 aaKnown RBP7.67□□□□□ -1.18
MED28-201ENST00000237380 TOMM20Q15388 145 aa7.67□□□□□ -1.18
MED28-201ENST00000237380 ATL1Q8WXF7 558 aa7.67□□□□□ -1.18
MED28-201ENST00000237380 AGBL1Q96MI9 1066 aa7.67□□□□□ -1.18
MED28-201ENST00000237380 TRIM17Q9Y577 477 aa7.67□□□□□ -1.18
MED28-201ENST00000237380 IQSEC2Q5JU85 1478 aa7.67□□□□□ -1.18
MED28-201ENST00000237380 STX11O75558 287 aa7.67□□□□□ -1.18
MED28-201ENST00000237380 RBP1P09455 135 aa7.67□□□□□ -1.18
MED28-201ENST00000237380 AMD1P17707 334 aa7.67□□□□□ -1.18
MED28-201ENST00000237380 PPATQ06203 517 aa7.67□□□□□ -1.18
MED28-201ENST00000237380 MAPK8IP2Q13387 824 aaPredicted RBP7.67□□□□□ -1.18
MED28-201ENST00000237380 NFIXQ14938 502 aa7.67□□□□□ -1.18
MED28-201ENST00000237380 PAGE2Q7Z2X7 111 aa7.67□□□□□ -1.18
MED28-201ENST00000237380 ADGRF2Q8IZF7 708 aa7.67□□□□□ -1.18
MED28-201ENST00000237380 SLC35F6Q8N357 371 aa7.67□□□□□ -1.18
MED28-201ENST00000237380 TASP1Q9H6P5 420 aa7.67□□□□□ -1.18
MED28-201ENST00000237380 XPNPEP3Q9NQH7 507 aa7.67□□□□□ -1.18
MED28-201ENST00000237380 SATB2Q9UPW6 733 aa7.67□□□□□ -1.18
MED28-201ENST00000237380 DCCP43146 1447 aa7.67□□□□□ -1.18
MED28-201ENST00000237380 ZSCAN5CA6NGD5 496 aaPredicted RBP7.66□□□□□ -1.18
MED28-201ENST00000237380 LSM8O95777 96 aaKnown RBP7.66□□□□□ -1.18
MED28-201ENST00000237380 ZNF7P17097 686 aaPredicted RBP7.66□□□□□ -1.18
MED28-201ENST00000237380 CCR1P32246 355 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 CCNG1P51959 295 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 PRMT9Q6P2P2 845 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 TRPM8Q7Z2W7 1104 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 SMARCD1Q96GM5 515 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 ZNF558Q96NG5 402 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 GINS4Q9BRT9 223 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 LZTS1Q9Y250 596 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 FCGR1AP12314 374 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 ACTR3P61158 418 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 RHOAP61586 193 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 DUS1LQ6P1R4 473 aaKnown RBP7.66□□□□□ -1.18
MED28-201ENST00000237380 IKBIPQ70UQ0 350 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 HCAR2Q8TDS4 363 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 LENG9Q96B70 501 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 CCT7Q99832 543 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 PRRG4Q9BZD6 226 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 PUS7LQ9H0K6 701 aaKnown RBP7.66□□□□□ -1.18
MED28-201ENST00000237380 ELOVL2Q9NXB9 296 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 PCSK1NQ9UHG2 260 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 MRPS33Q9Y291 106 aaKnown RBP7.66□□□□□ -1.18
MED28-201ENST00000237380 KIF1AQ12756 1690 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 BRD2P25440 801 aaKnown RBP7.66□□□□□ -1.18
MED28-201ENST00000237380 TRIP10Q15642 601 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 CNGA3Q16281 694 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 TMEM164Q5U3C3 297 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 JADE3Q92613 823 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.66□□□□□ -1.184e-6■■■□□ 15.8
MED28-201ENST00000237380 BTBD7Q9P203 1132 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 MAP2P11137 1827 aaKnown RBP7.66□□□□□ -1.18
MED28-201ENST00000237380 ABCA6Q8N139 1617 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 PALMO75781 387 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 VDRP11473 427 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 HSPA9P38646 679 aaKnown RBP7.66□□□□□ -1.18
MED28-201ENST00000237380 ADCK1Q86TW2 530 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 FIBCD1Q8N539 461 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 MS4A14Q96JA4 679 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 TTLL2Q9BWV7 592 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 CCDC134Q9H6E4 229 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 C3orf14Q9HBI5 128 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 A0A0G2JND7 137 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 MTRF1O75570 445 aaKnown RBP7.66□□□□□ -1.18
MED28-201ENST00000237380 MAPTP10636 758 aaKnown RBP7.66□□□□□ -1.18
MED28-201ENST00000237380 RPIAP49247 311 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 ARHGDIBP52566 201 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 PTPN12Q05209 780 aaKnown RBP7.66□□□□□ -1.18
MED28-201ENST00000237380 ZNF543Q08ER8 600 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 HDDC3Q8N4P3 179 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 ASAH2Q9NR71 780 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 SPTLC3Q9NUV7 552 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 HAUS5O94927 633 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 TCF7P36402 384 aaPredicted RBP7.66□□□□□ -1.18
MED28-201ENST00000237380 MYL6P60660 151 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 RGS1Q08116 209 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 CDC16Q13042 620 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 DEFB115Q30KQ5 88 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 SLFN11Q7Z7L1 901 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 CXorf40AQ8TE69 158 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 CCSER1Q9C0I3 900 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 TAF1DQ9H5J8 278 aaPredicted RBP7.66□□□□□ -1.18
MED28-201ENST00000237380 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.66□□□□□ -1.18
MED28-201ENST00000237380 COQ6Q9Y2Z9 468 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 ALKQ9UM73 1620 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 CCDC85CA6NKD9 419 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 ACTN3Q08043 901 aaPredicted RBP7.66□□□□□ -1.18
MED28-201ENST00000237380 PSMC3IPQ9P2W1 217 aaPredicted RBP7.66□□□□□ -1.18
MED28-201ENST00000237380 NR2E1Q9Y466 385 aa7.66□□□□□ -1.18
MED28-201ENST00000237380 NDUFB9Q9Y6M9 179 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms