RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 ROR1Q01973 937 aa19.45■□□□□ 0.7
SNX17-201ENST00000233575 ACAP1Q15027 740 aa19.45■□□□□ 0.7
SNX17-201ENST00000233575 DCAF6Q58WW2 860 aa19.45■□□□□ 0.7
SNX17-201ENST00000233575 ZFYVE27Q5T4F4 411 aa19.45■□□□□ 0.7
SNX17-201ENST00000233575 LRRC38Q5VT99 294 aa19.45■□□□□ 0.7
SNX17-201ENST00000233575 OTUD1Q5VV17 481 aaPredicted RBP19.45■□□□□ 0.7
SNX17-201ENST00000233575 CCDC50Q8IVM0 306 aa19.45■□□□□ 0.7
SNX17-201ENST00000233575 FIBCD1Q8N539 461 aa19.45■□□□□ 0.7
SNX17-201ENST00000233575 TBCBQ99426 244 aa19.45■□□□□ 0.7
SNX17-201ENST00000233575 CLSTN3Q9BQT9 956 aa19.45■□□□□ 0.7
SNX17-201ENST00000233575 INSL6Q9Y581 213 aa19.45■□□□□ 0.7
SNX17-201ENST00000233575 KRIT1O00522 736 aa19.44■□□□□ 0.7
SNX17-201ENST00000233575 KRT1P04264 644 aa19.44■□□□□ 0.7
SNX17-201ENST00000233575 RHOXF2BP0C7M4 288 aa19.44■□□□□ 0.7
SNX17-201ENST00000233575 DNAJB2P25686 324 aa19.44■□□□□ 0.7
SNX17-201ENST00000233575 PGFP49763 221 aa19.44■□□□□ 0.7
SNX17-201ENST00000233575 ITIH3Q06033 890 aa19.44■□□□□ 0.7
SNX17-201ENST00000233575 DUSP4Q13115 394 aa19.44■□□□□ 0.7
SNX17-201ENST00000233575 PM20D1Q6GTS8 502 aa19.44■□□□□ 0.7
SNX17-201ENST00000233575 SLC8B1Q6J4K2 584 aa19.44■□□□□ 0.7
SNX17-201ENST00000233575 VSTM1Q6UX27 236 aa19.44■□□□□ 0.7
SNX17-201ENST00000233575 SLC13A5Q86YT5 568 aaPredicted RBP19.44■□□□□ 0.7
SNX17-201ENST00000233575 SLC2A13Q96QE2 648 aa19.44■□□□□ 0.7
SNX17-201ENST00000233575 RHOXF2Q9BQY4 288 aa19.44■□□□□ 0.7
SNX17-201ENST00000233575 ZRANB2O95218 330 aaKnown RBP eCLIP19.44■□□□□ 0.7
SNX17-201ENST00000233575 TRUB2O95900 331 aaKnown RBP19.44■□□□□ 0.7
SNX17-201ENST00000233575 ATP2A2P16615 1042 aaKnown RBP19.44■□□□□ 0.7
SNX17-201ENST00000233575 PCK1P35558 622 aa19.44■□□□□ 0.7
SNX17-201ENST00000233575 PTPN9P43378 593 aa19.44■□□□□ 0.7
SNX17-201ENST00000233575 GLUD2P49448 558 aa19.44■□□□□ 0.7
SNX17-201ENST00000233575 DSG1Q02413 1049 aa19.44■□□□□ 0.7
SNX17-201ENST00000233575 MGAT5BQ3V5L5 792 aa19.44■□□□□ 0.7
SNX17-201ENST00000233575 COL13A1Q5TAT6 717 aaPredicted RBP19.44■□□□□ 0.7
SNX17-201ENST00000233575 DDX53Q86TM3 631 aaKnown RBP19.44■□□□□ 0.7
SNX17-201ENST00000233575 VPS52Q8N1B4 723 aa19.44■□□□□ 0.7
SNX17-201ENST00000233575 EXD1Q8NHP7 514 aa19.44■□□□□ 0.7
SNX17-201ENST00000233575 SEPT5Q99719 369 aaPredicted RBP19.44■□□□□ 0.7
SNX17-201ENST00000233575 HERC2P3Q9BVR0 1158 aa19.44■□□□□ 0.7
SNX17-201ENST00000233575 HEMGNQ9BXL5 484 aa19.44■□□□□ 0.7
SNX17-201ENST00000233575 POPDC2Q9HBU9 364 aa19.44■□□□□ 0.7
SNX17-201ENST00000233575 BACE2Q9Y5Z0 518 aa19.44■□□□□ 0.7
SNX17-201ENST00000233575 MYO16Q9Y6X6 1858 aa19.43■□□□□ 0.7
SNX17-201ENST00000233575 RARAP10276 462 aa19.43■□□□□ 0.7
SNX17-201ENST00000233575 MAGEA11P43364 429 aa19.43■□□□□ 0.7
SNX17-201ENST00000233575 USP46P62068 366 aa19.43■□□□□ 0.7
SNX17-201ENST00000233575 SMC1AQ14683 1233 aaKnown RBP19.43■□□□□ 0.7
SNX17-201ENST00000233575 HADHQ16836 314 aaKnown RBP19.43■□□□□ 0.7
SNX17-201ENST00000233575 SCYL2Q6P3W7 929 aa19.43■□□□□ 0.7
SNX17-201ENST00000233575 MFSD7Q6UXD7 560 aa19.43■□□□□ 0.7
SNX17-201ENST00000233575 POLNQ7Z5Q5 900 aa19.43■□□□□ 0.7
SNX17-201ENST00000233575 KLHL7Q8IXQ5 586 aa19.43■□□□□ 0.7
SNX17-201ENST00000233575 EDEM1Q92611 657 aa19.43■□□□□ 0.7
SNX17-201ENST00000233575 CENPIQ92674 756 aaPredicted RBP19.43■□□□□ 0.7
SNX17-201ENST00000233575 C8orf48Q96LL4 319 aa19.43■□□□□ 0.7
SNX17-201ENST00000233575 SLITRK1Q96PX8 696 aa19.43■□□□□ 0.7
SNX17-201ENST00000233575 LBHD1Q9BQE6 289 aaPredicted RBP19.43■□□□□ 0.7
SNX17-201ENST00000233575 ANKZF1Q9H8Y5 726 aa19.43■□□□□ 0.7
SNX17-201ENST00000233575 CHD7Q9P2D1 2997 aa19.43■□□□□ 0.7
SNX17-201ENST00000233575 LAMA3Q16787 3333 aa19.43■□□□□ 0.7
SNX17-201ENST00000233575 TLL1O43897 1013 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 FGF18O76093 207 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 LTFP02788 710 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 GLI1P08151 1106 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 CD48P09326 243 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 RALAP11233 206 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 SULT1E1P49888 294 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 ADCY2Q08462 1091 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 SPRED2Q7Z698 418 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 MMGT1Q8N4V1 131 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 ADAM32Q8TC27 787 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 SPPL2BQ8TCT7 592 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 HSPH1Q92598 858 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 ABHD8Q96I13 439 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 SLC9A7Q96T83 725 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 KRT12Q99456 494 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 RAD9AQ99638 391 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 HINFPQ9BQA5 517 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 DDX47Q9H0S4 455 aaKnown RBP19.42■□□□□ 0.7
SNX17-201ENST00000233575 PLEKHA4Q9H4M7 779 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 PCDHB12Q9Y5F1 795 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 PLXNA4Q9HCM2 1894 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 SYNJ2BP-COX16A0A087WUM0 186 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 LRRD1A4D1F6 860 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 KRT10P13645 584 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 NOS2P35228 1153 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 SIX1Q15475 284 aaPredicted RBP19.42■□□□□ 0.7
SNX17-201ENST00000233575 SLC25A52Q3SY17 297 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 C9orf50Q5SZB4 431 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 HDAC7Q8WUI4 952 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 CLP1Q92989 425 aaKnown RBP19.42■□□□□ 0.7
SNX17-201ENST00000233575 NPY6RQ99463 290 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 LRRC1Q9BTT6 524 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 OXCT2Q9BYC2 517 aaPredicted RBP19.42■□□□□ 0.7
SNX17-201ENST00000233575 GPATCH2LQ9NWQ4 482 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 COX16Q9P0S2 106 aa19.42■□□□□ 0.7
SNX17-201ENST00000233575 C3orf70A6NLC5 250 aaPredicted RBP19.41■□□□□ 0.7
SNX17-201ENST00000233575 TRIM66O15016 1216 aa19.41■□□□□ 0.7
SNX17-201ENST00000233575 PRPSAP2O60256 369 aa19.41■□□□□ 0.7
SNX17-201ENST00000233575 KRT7P08729 469 aa19.41■□□□□ 0.7
SNX17-201ENST00000233575 HAPLN1P10915 354 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms