RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 Q8N9G6 341 aaPredicted RBP13.5□□□□□ -0.25
MSH2-201ENST00000233146 SLC5A5Q92911 643 aa13.5□□□□□ -0.25
MSH2-201ENST00000233146 SLC35C1Q96A29 364 aa13.5□□□□□ -0.25
MSH2-201ENST00000233146 TRIM56Q9BRZ2 755 aaKnown RBP13.5□□□□□ -0.25
MSH2-201ENST00000233146 DHRS4Q9BTZ2 278 aa13.5□□□□□ -0.25
MSH2-201ENST00000233146 MOV10Q9HCE1 1003 aaKnown RBP13.5□□□□□ -0.25
MSH2-201ENST00000233146 PLCH1Q4KWH8 1693 aa13.5□□□□□ -0.25
MSH2-201ENST00000233146 LAMB1P07942 1786 aa13.5□□□□□ -0.25
MSH2-201ENST00000233146 LPXNO60711 386 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 UQCRFS1P1P0C7P4 283 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 LILRA2Q8N149 483 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 CAPSLQ8WWF8 208 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 RMND5BQ96G75 393 aaPredicted RBP13.49□□□□□ -0.25
MSH2-201ENST00000233146 FAM111AQ96PZ2 611 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 HOXD1Q9GZZ0 328 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 NIP7Q9Y221 180 aaKnown RBP eCLIP13.49□□□□□ -0.25
MSH2-201ENST00000233146 F5H6K3 240 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 GIPC1O14908 333 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 ALOX5P09917 674 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 ACAT1P24752 427 aaKnown RBP13.49□□□□□ -0.25
MSH2-201ENST00000233146 KLRC2P26717 231 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 DCKP27707 260 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 GNL1P36915 607 aaPredicted RBP13.49□□□□□ -0.25
MSH2-201ENST00000233146 FXR2P51116 673 aaKnown RBP eCLIP13.49□□□□□ -0.253e-6■■■□□ 15.6
MSH2-201ENST00000233146 CDH15P55291 814 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 DGKDQ16760 1214 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 TWF2Q6IBS0 349 aaKnown RBP13.49□□□□□ -0.25
MSH2-201ENST00000233146 GALNT13Q8IUC8 556 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 MINDY2Q8NBR6 621 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 HERPUD2Q9BSE4 406 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 IRF2BPLQ9H1B7 796 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 TP63Q9H3D4 680 aaPredicted RBP13.49□□□□□ -0.25
MSH2-201ENST00000233146 ANLNQ9NQW6 1124 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 PNPLA3Q9NST1 481 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 TBC1D14Q9P2M4 693 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 AGO2Q9UKV8 859 aaKnown RBP13.49□□□□□ -0.25
MSH2-201ENST00000233146 SLC8A2Q9UPR5 921 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 DYNC1LI2O43237 492 aaPredicted RBP13.49□□□□□ -0.25
MSH2-201ENST00000233146 FYNP06241 537 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 BMPR1AP36894 532 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 SLC1A1P43005 524 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 CLK3P49761 638 aaKnown RBP13.49□□□□□ -0.25
MSH2-201ENST00000233146 TPTEP56180 551 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 EIF2B5Q13144 721 aaKnown RBP13.49□□□□□ -0.25
MSH2-201ENST00000233146 DEFB107AQ8IZN7 70 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 EFCAB3Q8N7B9 438 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 AGPAT1Q99943 283 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 DDX56Q9NY93 547 aaKnown RBP13.49□□□□□ -0.25
MSH2-201ENST00000233146 CHORDC1Q9UHD1 332 aaPredicted RBP13.49□□□□□ -0.25
MSH2-201ENST00000233146 DNAJC12Q9UKB3 198 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 GTF3C4Q9UKN8 822 aa13.49□□□□□ -0.25
MSH2-201ENST00000233146 NFASCO94856 1347 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 ESYT2A0FGR8 921 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 ARHGAP33O14559 1287 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 SNAP91O60641 907 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 GMNNO75496 209 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 ITGAXP20702 1163 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 KRT6CP48668 564 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 GNA12Q03113 381 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 CCDC14Q49A88 953 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 ZFPM1Q8IX07 1006 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 LSMEM1Q8N8F7 131 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 ZNF486Q96H40 463 aaPredicted RBP13.48□□□□□ -0.25
MSH2-201ENST00000233146 RILPQ96NA2 401 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 MTMR9Q96QG7 549 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 CYP4F11Q9HBI6 524 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 AP4S1Q9Y587 144 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 H0YJX3 145 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 LRRN2O75325 713 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 AKAP3O75969 853 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 FGRP09769 529 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 ZNF26P17031 533 aaPredicted RBP13.48□□□□□ -0.25
MSH2-201ENST00000233146 EIF2AK2P19525 551 aaKnown RBP13.48□□□□□ -0.25
MSH2-201ENST00000233146 THOP1P52888 689 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 CENPCQ03188 943 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 CDONQ4KMG0 1287 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 DENND5BQ6ZUT9 1274 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 NATD1Q8N6N6 113 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 TERB1Q8NA31 727 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 ETNPPLQ8TBG4 499 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 ACAP3Q96P50 834 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 TCF12Q99081 682 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 C2orf49Q9BVC5 232 aaPredicted RBP13.48□□□□□ -0.25
MSH2-201ENST00000233146 FRMD8Q9BZ67 464 aaPredicted RBP13.48□□□□□ -0.25
MSH2-201ENST00000233146 CXorf21Q9HAI6 301 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 GPSM3Q9Y4H4 160 aa13.48□□□□□ -0.25
MSH2-201ENST00000233146 ILVBLA1L0T0 632 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 SCO2O43819 266 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 JRKO75564 520 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 IFNA8P32881 189 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 CASP5P51878 434 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 ZFP1Q6P2D0 407 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 POTEAQ6S8J7 498 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 TMA16Q96EY4 203 aaKnown RBP13.47□□□□□ -0.25
MSH2-201ENST00000233146 BTBD6Q96KE9 485 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 COPS7BQ9H9Q2 264 aaPredicted RBP13.47□□□□□ -0.25
MSH2-201ENST00000233146 THAP1Q9NVV9 213 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 SEPT3Q9UH03 358 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 SPATA31A1Q5TZJ5 1347 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 ARHGEF37A1IGU5 675 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms