RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 KCNV2Q8TDN2 545 aa12.31□□□□□ -0.44
FRG1-201ENST00000226798 OVCA2Q8WZ82 227 aa12.31□□□□□ -0.44
FRG1-201ENST00000226798 OTUB2Q96DC9 234 aa12.31□□□□□ -0.44
FRG1-201ENST00000226798 ZNF518BQ9C0D4 1074 aa12.31□□□□□ -0.44
FRG1-201ENST00000226798 CD248Q9HCU0 757 aa12.31□□□□□ -0.44
FRG1-201ENST00000226798 FSCN3Q9NQT6 498 aa12.31□□□□□ -0.44
FRG1-201ENST00000226798 TBC1D14Q9P2M4 693 aa12.31□□□□□ -0.44
FRG1-201ENST00000226798 HCN2Q9UL51 889 aa12.31□□□□□ -0.44
FRG1-201ENST00000226798 SLC6A14Q9UN76 642 aa12.31□□□□□ -0.44
FRG1-201ENST00000226798 LHX6Q9UPM6 363 aa12.31□□□□□ -0.44
FRG1-201ENST00000226798 R3HCC1Q9Y3T6 440 aaKnown RBP12.31□□□□□ -0.44
FRG1-201ENST00000226798 CLIC4Q9Y696 253 aa12.31□□□□□ -0.44
FRG1-201ENST00000226798 A0A087X0B3 334 aa12.3□□□□□ -0.44
FRG1-201ENST00000226798 ZNF233A6NK53 670 aa12.3□□□□□ -0.44
FRG1-201ENST00000226798 H0Y626 953 aa12.3□□□□□ -0.44
FRG1-201ENST00000226798 COCHO43405 550 aa12.3□□□□□ -0.44
FRG1-201ENST00000226798 TULP3O75386 442 aa12.3□□□□□ -0.44
FRG1-201ENST00000226798 TRIM16O95361 564 aa12.3□□□□□ -0.44
FRG1-201ENST00000226798 ABL1P00519 1130 aa12.3□□□□□ -0.44
FRG1-201ENST00000226798 GABRG2P18507 467 aa12.3□□□□□ -0.44
FRG1-201ENST00000226798 HOXD13P35453 343 aa12.3□□□□□ -0.44
FRG1-201ENST00000226798 GNL1P36915 607 aaPredicted RBP12.3□□□□□ -0.44
FRG1-201ENST00000226798 TXLNAP40222 546 aa12.3□□□□□ -0.44
FRG1-201ENST00000226798 FAM193AP78312 1265 aa12.3□□□□□ -0.44
FRG1-201ENST00000226798 RPL6Q02878 288 aaKnown RBP12.3□□□□□ -0.44
FRG1-201ENST00000226798 GAD2Q05329 585 aa12.3□□□□□ -0.44
FRG1-201ENST00000226798 GFPT1Q06210 699 aaPredicted RBP12.3□□□□□ -0.44
FRG1-201ENST00000226798 ERICH6BQ5W0A0 696 aa12.3□□□□□ -0.44
FRG1-201ENST00000226798 CCDC73Q6ZRK6 1079 aa12.3□□□□□ -0.44
FRG1-201ENST00000226798 HS2ST1Q7LGA3 356 aa12.3□□□□□ -0.44
FRG1-201ENST00000226798 TRAPPC11Q7Z392 1133 aa12.3□□□□□ -0.44
FRG1-201ENST00000226798 TRMT11Q7Z4G4 463 aaKnown RBP12.3□□□□□ -0.44
FRG1-201ENST00000226798 RAB44Q7Z6P3 723 aaPredicted RBP12.3□□□□□ -0.44
FRG1-201ENST00000226798 ZNF513Q8N8E2 541 aaPredicted RBP12.3□□□□□ -0.44
FRG1-201ENST00000226798 TERB1Q8NA31 727 aa12.3□□□□□ -0.44
FRG1-201ENST00000226798 GLIS3Q8NEA6 775 aa12.3□□□□□ -0.44
FRG1-201ENST00000226798 PDZD8Q8NEN9 1154 aa12.3□□□□□ -0.44
FRG1-201ENST00000226798 CLIC6Q96NY7 704 aa12.3□□□□□ -0.44
FRG1-201ENST00000226798 MMS19Q96T76 1030 aa12.3□□□□□ -0.44
FRG1-201ENST00000226798 DPEP3Q9H4B8 488 aa12.3□□□□□ -0.44
FRG1-201ENST00000226798 PANK4Q9NVE7 773 aa12.3□□□□□ -0.44
FRG1-201ENST00000226798 HSPBP1Q9NZL4 362 aa12.3□□□□□ -0.44
FRG1-201ENST00000226798 CALCOCO1Q9P1Z2 691 aa12.3□□□□□ -0.44
FRG1-201ENST00000226798 MYH10P35580 1976 aa12.3□□□□□ -0.44
FRG1-201ENST00000226798 ASH1LQ9NR48 2969 aaKnown RBP12.3□□□□□ -0.44
FRG1-201ENST00000226798 PLXNB3Q9ULL4 1909 aa12.29□□□□□ -0.44
FRG1-201ENST00000226798 IGHV1OR15-9A0A0B4J2B8 117 aa12.29□□□□□ -0.44
FRG1-201ENST00000226798 A0A1W2PQF6 199 aa12.29□□□□□ -0.44
FRG1-201ENST00000226798 OPHN1O60890 802 aa12.29□□□□□ -0.44
FRG1-201ENST00000226798 FAM163BP0C2L3 166 aa12.29□□□□□ -0.44
FRG1-201ENST00000226798 CD59P13987 128 aa12.29□□□□□ -0.44
FRG1-201ENST00000226798 PTPN1P18031 435 aaKnown RBP12.29□□□□□ -0.44
FRG1-201ENST00000226798 YWHAQP27348 245 aa12.29□□□□□ -0.44
FRG1-201ENST00000226798 TUBP50607 506 aa12.29□□□□□ -0.44
FRG1-201ENST00000226798 ATXN3P54252 364 aaPredicted RBP12.29□□□□□ -0.44
FRG1-201ENST00000226798 SNX30Q5VWJ9 437 aa12.29□□□□□ -0.44
FRG1-201ENST00000226798 SLC36A4Q6YBV0 504 aa12.29□□□□□ -0.44
FRG1-201ENST00000226798 RABEPKQ7Z6M1 372 aa12.29□□□□□ -0.44
FRG1-201ENST00000226798 MIB1Q86YT6 1006 aa12.29□□□□□ -0.44
FRG1-201ENST00000226798 SLC41A1Q8IVJ1 513 aa12.29□□□□□ -0.44
FRG1-201ENST00000226798 BBS7Q8IWZ6 715 aa12.29□□□□□ -0.44
FRG1-201ENST00000226798 NUP93Q8N1F7 819 aa12.29□□□□□ -0.44
FRG1-201ENST00000226798 PGBD3Q8N328 593 aa12.29□□□□□ -0.44
FRG1-201ENST00000226798 HDDC3Q8N4P3 179 aa12.29□□□□□ -0.44
FRG1-201ENST00000226798 MINDY1Q8N5J2 469 aa12.29□□□□□ -0.44
FRG1-201ENST00000226798 B3GALNT2Q8NCR0 500 aa12.29□□□□□ -0.44
FRG1-201ENST00000226798 GTPBP2Q9BX10 602 aaKnown RBP12.29□□□□□ -0.44
FRG1-201ENST00000226798 B3GNT5Q9BYG0 378 aa12.29□□□□□ -0.44
FRG1-201ENST00000226798 SNX25Q9H3E2 840 aa12.29□□□□□ -0.44
FRG1-201ENST00000226798 DNAAF2Q9NVR5 837 aaKnown RBP12.29□□□□□ -0.44
FRG1-201ENST00000226798 IL37Q9NZH6 218 aa12.29□□□□□ -0.44
FRG1-201ENST00000226798 DEC1Q9P2X7 70 aa12.29□□□□□ -0.44
FRG1-201ENST00000226798 STARD13Q9Y3M8 1113 aa12.29□□□□□ -0.44
FRG1-201ENST00000226798 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.29□□□□□ -0.44
FRG1-201ENST00000226798 MORC2Q9Y6X9 1032 aaPredicted RBP12.29□□□□□ -0.44
FRG1-201ENST00000226798 CFAP46Q8IYW2 2715 aa12.29□□□□□ -0.44
FRG1-201ENST00000226798 PTPRBP23467 1997 aa12.29□□□□□ -0.44
FRG1-201ENST00000226798 FAM92AA1XBS5 289 aa12.28□□□□□ -0.44
FRG1-201ENST00000226798 TBC1D3BA6NDS4 549 aa12.28□□□□□ -0.44
FRG1-201ENST00000226798 TAF4O00268 1085 aa12.28□□□□□ -0.44
FRG1-201ENST00000226798 CLDN5O00501 218 aa12.28□□□□□ -0.44
FRG1-201ENST00000226798 ARHGAP33O14559 1287 aa12.28□□□□□ -0.44
FRG1-201ENST00000226798 GJB3O75712 270 aa12.28□□□□□ -0.44
FRG1-201ENST00000226798 RTN3O95197 1032 aaPredicted RBP12.28□□□□□ -0.44
FRG1-201ENST00000226798 STAU1O95793 577 aaKnown RBP12.28□□□□□ -0.44
FRG1-201ENST00000226798 CST3P01034 146 aaPredicted RBP12.28□□□□□ -0.44
FRG1-201ENST00000226798 ZDHHC11BP0C7U3 371 aa12.28□□□□□ -0.44
FRG1-201ENST00000226798 HOXB2P14652 356 aa12.28□□□□□ -0.44
FRG1-201ENST00000226798 NTSR1P30989 418 aa12.28□□□□□ -0.44
FRG1-201ENST00000226798 STAT6P42226 847 aa12.28□□□□□ -0.44
FRG1-201ENST00000226798 ZNF33AQ06730 810 aa12.28□□□□□ -0.44
FRG1-201ENST00000226798 IFRD2Q12894 506 aaPredicted RBP12.28□□□□□ -0.44
FRG1-201ENST00000226798 SNRNP35Q16560 246 aaKnown RBP12.28□□□□□ -0.44
FRG1-201ENST00000226798 ZNF423Q2M1K9 1284 aa12.28□□□□□ -0.44
FRG1-201ENST00000226798 PREPLQ4J6C6 727 aaPredicted RBP12.28□□□□□ -0.44
FRG1-201ENST00000226798 C10orf76Q5T2E6 689 aa12.28□□□□□ -0.44
FRG1-201ENST00000226798 HECTD3Q5T447 861 aa12.28□□□□□ -0.44
FRG1-201ENST00000226798 BTBD8Q5XKL5 378 aa12.28□□□□□ -0.44
FRG1-201ENST00000226798 PROSER1Q86XN7 944 aa12.28□□□□□ -0.44
FRG1-201ENST00000226798 TMEM25Q86YD3 366 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms