RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 POLR1AO95602 1720 aaPredicted RBP13.66□□□□□ -0.22
COL1A1-201ENST00000225964 TMEM120BA0PK00 339 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 CCNG1P51959 295 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 BACE1P56817 501 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 DAB2IPQ5VWQ8 1189 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 CACUL1Q86Y37 369 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 AGGF1Q8N302 714 aaeCLIP13.66□□□□□ -0.22
COL1A1-201ENST00000225964 SPIRE2Q8WWL2 714 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 CAAP1Q9H8G2 361 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 SYBUQ9NX95 663 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 DCDC2Q9UHG0 476 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 M0R3G1 203 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 PDHXO00330 501 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 CASP4P49662 377 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 BOLA3Q53S33 107 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 RIBC1Q8N443 379 aaPredicted RBP13.66□□□□□ -0.22
COL1A1-201ENST00000225964 SGSM3Q96HU1 749 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 MTG1Q9BT17 334 aaPredicted RBP13.66□□□□□ -0.22
COL1A1-201ENST00000225964 KPNA6O60684 536 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 PSMA4P25789 261 aaKnown RBP13.66□□□□□ -0.22
COL1A1-201ENST00000225964 ICE2Q659A1 982 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 ATXN3LQ9H3M9 355 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 C17orf75Q9HAS0 396 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 MIEF1Q9NQG6 463 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 DDX43Q9NXZ2 648 aaKnown RBP13.66□□□□□ -0.22
COL1A1-201ENST00000225964 GLP2RO95838 553 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 ENO2P09104 434 aaPredicted RBP13.66□□□□□ -0.22
COL1A1-201ENST00000225964 TFE3P19532 575 aaPredicted RBP13.66□□□□□ -0.22
COL1A1-201ENST00000225964 FEN1P39748 380 aaKnown RBP13.66□□□□□ -0.22
COL1A1-201ENST00000225964 LY6KQ17RY6 165 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 C2CD6Q53TS8 623 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 AGBL2Q5U5Z8 902 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 DOK6Q6PKX4 331 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 ACER1Q8TDN7 264 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 ILKAPQ9H0C8 392 aaPredicted RBP13.66□□□□□ -0.22
COL1A1-201ENST00000225964 NFIBO00712 420 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 PRKAA1Q13131 559 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 TRIP10Q15642 601 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 TRIM71Q2Q1W2 868 aaKnown RBP13.65□□□□□ -0.22
COL1A1-201ENST00000225964 RABL6Q3YEC7 729 aaPredicted RBP13.65□□□□□ -0.22
COL1A1-201ENST00000225964 SYTL1Q8IYJ3 562 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 LPCAT1Q8NF37 534 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 ABCB1P08183 1280 aaPredicted RBP13.65□□□□□ -0.22
COL1A1-201ENST00000225964 PREPLQ4J6C6 727 aaPredicted RBP13.65□□□□□ -0.22
COL1A1-201ENST00000225964 DNAJB3Q8WWF6 145 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 PRMT6Q96LA8 375 aaPredicted RBP13.65□□□□□ -0.22
COL1A1-201ENST00000225964 MKNK1Q9BUB5 465 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 TIMM13Q9Y5L4 95 aaPredicted RBP13.65□□□□□ -0.22
COL1A1-201ENST00000225964 A0A1W2PQJ5 194 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 CYP11B2P19099 503 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 GARTP22102 1010 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 POU1F1P28069 291 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 TRIM28Q13263 835 aaKnown RBP13.65□□□□□ -0.22
COL1A1-201ENST00000225964 TERF2Q15554 542 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 PPM1LQ5SGD2 360 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 CLYBLQ8N0X4 340 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 SLC20A1Q8WUM9 679 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 SETD4Q9NVD3 440 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 GPR75-ASB3A0A0A6YYF3 556 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 NR1I3Q14994 352 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 PTAR1Q7Z6K3 402 aaPredicted RBP13.65□□□□□ -0.22
COL1A1-201ENST00000225964 IL17RAQ96F46 866 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 XPO6Q96QU8 1125 aaKnown RBP13.65□□□□□ -0.22
COL1A1-201ENST00000225964 APOL2Q9BQE5 337 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 WDR41Q9HAD4 459 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 NR5A2O00482 541 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 HNRNPCP07910 306 aaKnown RBP eCLIP13.65□□□□□ -0.22
COL1A1-201ENST00000225964 SCNN1BP51168 640 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 DEFA1P59665 94 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 DEFA3P59666 94 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 BTG3Q14201 252 aaPredicted RBP13.65□□□□□ -0.22
COL1A1-201ENST00000225964 PDK2Q15119 407 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 SIX5Q8N196 739 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 PGLYRP2Q96PD5 576 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 FAM111AQ96PZ2 611 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 POP1Q99575 1024 aaKnown RBP13.65□□□□□ -0.22
COL1A1-201ENST00000225964 FOXP3Q9BZS1 431 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 KLHL20Q9Y2M5 609 aa13.65□□□□□ -0.22
COL1A1-201ENST00000225964 GLRA3O75311 464 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 FBXO21O94952 628 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 ZNF682O95780 498 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 KLRK1P26718 216 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 BARGINQ6ZT62 677 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 MTERF3Q96E29 417 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 CGRRF1Q99675 332 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 IRX2Q9BZI1 471 aaPredicted RBP13.64□□□□□ -0.23
COL1A1-201ENST00000225964 A0A087WZ62 844 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 SNTNA6NMZ2 147 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 CCNT2O60583 730 aaKnown RBP13.64□□□□□ -0.23
COL1A1-201ENST00000225964 ARP10275 920 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 GYS1P13807 737 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 TKTL1P51854 596 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 HLA-DQA1Q5Y7H0 255 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 RASGRP2Q7LDG7 609 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 NSL1Q96IY1 281 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 FDXACB1Q9BRP7 624 aaPredicted RBP13.64□□□□□ -0.23
COL1A1-201ENST00000225964 NUDT14O95848 222 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 MRPL48Q96GC5 212 aaKnown RBP13.64□□□□□ -0.23
COL1A1-201ENST00000225964 SEC16BQ96JE7 1060 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 ACOX2Q99424 681 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms