RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 CTSHP09668 335 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 ALDH3A1P30838 453 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 ADCY8P40145 1251 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 CAP1Q01518 475 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 PDK4Q16654 411 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 PLEKHA7Q6IQ23 1121 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 DCUN1D2Q6PH85 259 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 GALNT15Q8N3T1 639 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 RIBC1Q8N443 379 aaPredicted RBP13.67□□□□□ -0.22
PLOD3-201ENST00000223127 PHC3Q8NDX5 983 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 FEZF2Q8TBJ5 459 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 KATNAL1Q9BW62 490 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 TLE6Q9H808 572 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 DLGAP2Q9P1A6 1054 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 ITGA11Q9UKX5 1188 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 SNX9Q9Y5X1 595 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 PIK3R2O00459 728 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 NVLO15381 856 aaKnown RBP13.67□□□□□ -0.22
PLOD3-201ENST00000223127 DUSP11O75319 330 aaKnown RBP13.67□□□□□ -0.22
PLOD3-201ENST00000223127 PROSCO94903 275 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 TM4SF4P48230 202 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 RPS6KA3P51812 740 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 SESN3P58005 492 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 TAS2R40P59535 323 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 CDC42EP1Q00587 391 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 LMNB2Q03252 620 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 TAF1BQ53T94 588 aaPredicted RBP13.67□□□□□ -0.22
PLOD3-201ENST00000223127 DNAJC24Q6P3W2 148 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 GRK7Q8WTQ7 553 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 VCPIP1Q96JH7 1222 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 CYTH4Q9UIA0 394 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 SCINQ9Y6U3 715 aa13.67□□□□□ -0.22
PLOD3-201ENST00000223127 PRPF4O43172 522 aaKnown RBP eCLIP13.66□□□□□ -0.22
PLOD3-201ENST00000223127 CILPO75339 1184 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 FGFR1P11362 822 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 P4HA1P13674 534 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 TCF4P15884 667 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 ATICP31939 592 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 MAN1A1P33908 653 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 NDST1P52848 882 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 PTPN11Q06124 597 aaPredicted RBP13.66□□□□□ -0.22
PLOD3-201ENST00000223127 SPARCL1Q14515 664 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 PPP1R15BQ5SWA1 713 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 RNF220Q5VTB9 566 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 IZUMO3Q5VZ72 239 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 MFSD14CQ5VZR4 134 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 OR52E8Q6IFG1 317 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 IRGCQ6NXR0 463 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 C12orf29Q8N999 325 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 UBA3Q8TBC4 463 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 TMEM176AQ96HP8 235 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 SNX27Q96L92 541 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 HEMGNQ9BXL5 484 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 SYNCQ9H7C4 482 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 RPL26L1Q9UNX3 145 aaKnown RBP13.66□□□□□ -0.22
PLOD3-201ENST00000223127 ZSWIM8A7E2V4 1837 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 TMEM88BA6NKF7 163 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 LSM8O95777 96 aaKnown RBP13.66□□□□□ -0.22
PLOD3-201ENST00000223127 ABHD2P08910 425 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 ELNP15502 786 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 IRF5Q13568 498 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 NBPF20Q3BBV1 942 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 PTPN20Q4JDL3 420 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 RELL1Q8IUW5 271 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.66□□□□□ -0.22
PLOD3-201ENST00000223127 FAM118BQ9BPY3 351 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 DCLRE1BQ9H816 532 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 GOLGA2P5Q9HBQ8 144 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 WDR35Q9P2L0 1181 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 Q9Y3F1 56 aa13.66□□□□□ -0.22
PLOD3-201ENST00000223127 M0QYV0 167 aa13.65□□□□□ -0.22
PLOD3-201ENST00000223127 CALB1P05937 261 aa13.65□□□□□ -0.22
PLOD3-201ENST00000223127 CYBAP13498 195 aa13.65□□□□□ -0.22
PLOD3-201ENST00000223127 PTPN4P29074 926 aa13.65□□□□□ -0.22
PLOD3-201ENST00000223127 NFX1Q12986 1120 aaKnown RBP13.65□□□□□ -0.22
PLOD3-201ENST00000223127 SLC1A5Q15758 541 aa13.65□□□□□ -0.22
PLOD3-201ENST00000223127 CTC1Q2NKJ3 1217 aa13.65□□□□□ -0.22
PLOD3-201ENST00000223127 ATP13A4Q4VNC1 1196 aa13.65□□□□□ -0.22
PLOD3-201ENST00000223127 FOXB2Q5VYV0 432 aa13.65□□□□□ -0.22
PLOD3-201ENST00000223127 TWF2Q6IBS0 349 aaKnown RBP13.65□□□□□ -0.22
PLOD3-201ENST00000223127 APBB1IPQ7Z5R6 666 aaPredicted RBP13.65□□□□□ -0.22
PLOD3-201ENST00000223127 LRRC8CQ8TDW0 803 aa13.65□□□□□ -0.22
PLOD3-201ENST00000223127 ZFAND2BQ8WV99 257 aa13.65□□□□□ -0.22
PLOD3-201ENST00000223127 PLVAPQ9BX97 442 aa13.65□□□□□ -0.22
PLOD3-201ENST00000223127 CYLDQ9NQC7 956 aa13.65□□□□□ -0.22
PLOD3-201ENST00000223127 LNPEPQ9UIQ6 1025 aa13.65□□□□□ -0.22
PLOD3-201ENST00000223127 PCDHGC3Q9UN70 934 aa13.65□□□□□ -0.22
PLOD3-201ENST00000223127 EXOC1LA0A1B0GW35 172 aa13.65□□□□□ -0.22
PLOD3-201ENST00000223127 F8VP50 259 aa13.65□□□□□ -0.22
PLOD3-201ENST00000223127 IGHA2P01877 340 aa13.65□□□□□ -0.22
PLOD3-201ENST00000223127 VHLP40337 213 aa13.65□□□□□ -0.22
PLOD3-201ENST00000223127 RASSF2P50749 326 aa13.65□□□□□ -0.22
PLOD3-201ENST00000223127 PKN2Q16513 984 aaKnown RBP13.65□□□□□ -0.22
PLOD3-201ENST00000223127 KHDC1Q4VXA5 237 aaKnown RBP13.65□□□□□ -0.22
PLOD3-201ENST00000223127 SPDYAQ5MJ70 313 aa13.65□□□□□ -0.22
PLOD3-201ENST00000223127 C4orf50Q6ZRC1 276 aa13.65□□□□□ -0.22
PLOD3-201ENST00000223127 NLRP9Q7RTR0 991 aa13.65□□□□□ -0.22
PLOD3-201ENST00000223127 OTOAQ7RTW8 1153 aa13.65□□□□□ -0.22
PLOD3-201ENST00000223127 C4orf33Q8N1A6 199 aa13.65□□□□□ -0.22
PLOD3-201ENST00000223127 NRG4Q8WWG1 115 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms