RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 MDM4O15151 490 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 THAP12O43422 761 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 TLR5O60602 858 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 GABBR2O75899 941 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 TPM2P07951 284 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 ARSAP15289 507 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 PFKLP17858 780 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 AVPR2P30518 371 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 PLA2G4AP47712 749 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 SOX9P48436 509 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 ZNF165P49910 485 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 PDE6CP51160 858 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 TKTL1P51854 596 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 STARD6P59095 220 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 RAPGEF1Q13905 1077 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 ZSCAN23Q3MJ62 389 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 PMF1Q6P1K2 205 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 DENND1BQ6P3S1 775 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 APTXQ7Z2E3 356 aaKnown RBP13.35□□□□□ -0.27
LSM5-201ENST00000223084 CCDC186Q7Z3E2 898 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 CSGALNACT1Q8TDX6 532 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 FAM81BQ96LP2 452 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 FAM83CQ9BQN1 747 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 ULBP1Q9BZM6 244 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 EBF3Q9H4W6 596 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 LRRC4Q9HBW1 653 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 HPS4Q9NQG7 708 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 NAGPAQ9UK23 515 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 MTF2Q9Y483 593 aaPredicted RBP13.35□□□□□ -0.27
LSM5-201ENST00000223084 WNT6Q9Y6F9 365 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 PIAS3Q9Y6X2 628 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 KMT2EQ8IZD2 1858 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 SMTNL1A8MU46 457 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 LGALS16A8MUM7 142 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 EPHB6O15197 1021 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 SETSIPP0DME0 302 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 RARGP13631 454 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 LCP1P13796 627 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 UCHL3P15374 230 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 GNA15P30679 374 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 TUBP50607 506 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 KPNA1P52294 538 aaPredicted RBP13.34□□□□□ -0.27
LSM5-201ENST00000223084 PLCB2Q00722 1185 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 PRKCQQ04759 706 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 ADIGQ0VDE8 80 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 DRAP1Q14919 205 aaPredicted RBP13.34□□□□□ -0.27
LSM5-201ENST00000223084 IQCB1Q15051 598 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 STILQ15468 1287 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 SKOR2Q2VWA4 1001 aaPredicted RBP13.34□□□□□ -0.27
LSM5-201ENST00000223084 FKBP15Q5T1M5 1219 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 CC2D1AQ6P1N0 951 aaPredicted RBP13.34□□□□□ -0.27
LSM5-201ENST00000223084 ANKRD20A12PQ8NF67 263 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 SLC35F5Q8WV83 523 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 ZNF606Q8WXB4 792 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 WBP2Q969T9 261 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 SHDQ96IW2 340 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 ZFRQ96KR1 1074 aaKnown RBP13.34□□□□□ -0.27
LSM5-201ENST00000223084 NACA2Q9H009 215 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 GANQ9H2C0 597 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 LINC00597Q9H2U6 94 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 CBX8Q9HC52 389 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 TRPV5Q9NQA5 729 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 FAM207AQ9NSI2 230 aaPredicted RBP13.34□□□□□ -0.27
LSM5-201ENST00000223084 CFAP97Q9P2B7 532 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 MYOFQ9NZM1 2061 aa13.34□□□□□ -0.27
LSM5-201ENST00000223084 KANSL1LA0AUZ9 987 aa13.33□□□□□ -0.28
LSM5-201ENST00000223084 OTOL1A6NHN0 477 aaPredicted RBP13.33□□□□□ -0.28
LSM5-201ENST00000223084 LRRC10BA6NIK2 292 aa13.33□□□□□ -0.28
LSM5-201ENST00000223084 ZBED1O96006 694 aa13.33□□□□□ -0.28
LSM5-201ENST00000223084 DCNP07585 359 aaKnown RBP13.33□□□□□ -0.28
LSM5-201ENST00000223084 IRF1P10914 325 aa13.33□□□□□ -0.28
LSM5-201ENST00000223084 TCF3P15923 654 aa13.33□□□□□ -0.28
LSM5-201ENST00000223084 AOC1P19801 751 aa13.33□□□□□ -0.28
LSM5-201ENST00000223084 CLCN1P35523 988 aa13.33□□□□□ -0.28
LSM5-201ENST00000223084 GPD2P43304 727 aa13.33□□□□□ -0.28
LSM5-201ENST00000223084 CLCN5P51795 746 aa13.33□□□□□ -0.28
LSM5-201ENST00000223084 UBXN1Q04323 297 aa13.33□□□□□ -0.28
LSM5-201ENST00000223084 UBXN2BQ14CS0 331 aa13.33□□□□□ -0.28
LSM5-201ENST00000223084 SYCP1Q15431 976 aa13.33□□□□□ -0.28
LSM5-201ENST00000223084 BHLHA9Q7RTU4 235 aa13.33□□□□□ -0.28
LSM5-201ENST00000223084 SLC47A2Q86VL8 602 aa13.33□□□□□ -0.28
LSM5-201ENST00000223084 FAM71AQ8IYT1 594 aa13.33□□□□□ -0.28
LSM5-201ENST00000223084 KCTD13Q8WZ19 329 aa13.33□□□□□ -0.28
LSM5-201ENST00000223084 DDX23Q9BUQ8 820 aaKnown RBP13.33□□□□□ -0.28
LSM5-201ENST00000223084 NAA15Q9BXJ9 866 aaKnown RBP13.33□□□□□ -0.28
LSM5-201ENST00000223084 CYLDQ9NQC7 956 aa13.33□□□□□ -0.28
LSM5-201ENST00000223084 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.33□□□□□ -0.28
LSM5-201ENST00000223084 DUS2Q9NX74 493 aaKnown RBP13.33□□□□□ -0.28
LSM5-201ENST00000223084 SIK3Q9Y2K2 1263 aa13.33□□□□□ -0.28
LSM5-201ENST00000223084 FAM170BA6NMN3 283 aa13.32□□□□□ -0.28
LSM5-201ENST00000223084 MED7O43513 233 aa13.32□□□□□ -0.28
LSM5-201ENST00000223084 RALAP11233 206 aa13.32□□□□□ -0.28
LSM5-201ENST00000223084 GLULP15104 373 aa13.32□□□□□ -0.28
LSM5-201ENST00000223084 TARSP26639 723 aaKnown RBP13.32□□□□□ -0.28
LSM5-201ENST00000223084 ATP5C1P36542 298 aaKnown RBP13.32□□□□□ -0.28
LSM5-201ENST00000223084 IFNAR2P48551 515 aa13.32□□□□□ -0.28
LSM5-201ENST00000223084 POLR2FP61218 127 aaKnown RBP13.32□□□□□ -0.28
LSM5-201ENST00000223084 YWHAGP61981 247 aaKnown RBP eCLIP13.32□□□□□ -0.28
LSM5-201ENST00000223084 PTK2Q05397 1052 aa13.32□□□□□ -0.28
LSM5-201ENST00000223084 RUNX3Q13761 415 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms