RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 OR6B3Q8NGW1 331 aa15.23■□□□□ 0.03
CNOT3-201ENST00000221232 C18orf25Q96B23 403 aaPredicted RBP15.23■□□□□ 0.03
CNOT3-201ENST00000221232 SNTG2Q9NY99 539 aa15.23■□□□□ 0.03
CNOT3-201ENST00000221232 COX16Q9P0S2 106 aa15.23■□□□□ 0.03
CNOT3-201ENST00000221232 ZFP69BQ9UJL9 534 aa15.23■□□□□ 0.03
CNOT3-201ENST00000221232 CCDC195A0A1B0GUA6 201 aa15.23■□□□□ 0.03
CNOT3-201ENST00000221232 SLC25A27O95847 323 aa15.23■□□□□ 0.03
CNOT3-201ENST00000221232 ZBED1O96006 694 aa15.23■□□□□ 0.03
CNOT3-201ENST00000221232 P4HA1P13674 534 aa15.23■□□□□ 0.03
CNOT3-201ENST00000221232 ADORA2BP29275 332 aa15.23■□□□□ 0.03
CNOT3-201ENST00000221232 GRIA1P42261 906 aa15.23■□□□□ 0.03
CNOT3-201ENST00000221232 ACVR2BQ13705 512 aa15.23■□□□□ 0.03
CNOT3-201ENST00000221232 NOMO1Q15155 1222 aa15.23■□□□□ 0.03
CNOT3-201ENST00000221232 TTC30AQ86WT1 665 aa15.23■□□□□ 0.03
CNOT3-201ENST00000221232 PCDH19Q8TAB3 1148 aa15.23■□□□□ 0.03
CNOT3-201ENST00000221232 DPEP3Q9H4B8 488 aa15.23■□□□□ 0.03
CNOT3-201ENST00000221232 FBXO6Q9NRD1 293 aaPredicted RBP15.23■□□□□ 0.03
CNOT3-201ENST00000221232 NKX1-2Q9UD57 310 aaPredicted RBP15.23■□□□□ 0.03
CNOT3-201ENST00000221232 EFR3BQ9Y2G0 817 aa15.23■□□□□ 0.03
CNOT3-201ENST00000221232 PPP2R3BQ9Y5P8 575 aa15.23■□□□□ 0.03
CNOT3-201ENST00000221232 ZWINTO95229 277 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 LCP1P13796 627 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 ERFP50548 548 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 GSCP56915 257 aaPredicted RBP15.22■□□□□ 0.03
CNOT3-201ENST00000221232 RBP5P82980 135 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 ZBTB16Q05516 673 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 CDHR3Q6ZTQ4 885 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 ERO1BQ86YB8 467 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 MZB1Q8WU39 189 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 DHX35Q9H5Z1 703 aaKnown RBP15.22■□□□□ 0.03
CNOT3-201ENST00000221232 USP29Q9HBJ7 922 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 TXLNGQ9NUQ3 528 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 HEY2Q9UBP5 337 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 MFHAS1Q9Y4C4 1052 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 MCM3APO60318 1980 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 TRIM49D1C9J1S8 452 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 NPTXRO95502 500 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 KITP10721 976 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 ARHGAP1Q07960 439 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 TAZQ16635 292 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 FYB2Q5VWT5 728 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 BSPRYQ5W0U4 402 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 EXOC8Q8IYI6 725 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 ZMAT2Q96NC0 199 aaKnown RBP15.22■□□□□ 0.03
CNOT3-201ENST00000221232 SNRNP25Q9BV90 132 aaKnown RBP15.22■□□□□ 0.03
CNOT3-201ENST00000221232 TBC1D10AQ9BXI6 508 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 CEP41Q9BYV8 373 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 CXorf56Q9H5V9 222 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 KLK14Q9P0G3 267 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 NME7Q9Y5B8 376 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 DNAJC25-GNG10A0A024R161 153 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 TOP3BO95985 862 aaKnown RBP15.22■□□□□ 0.03
CNOT3-201ENST00000221232 MCF2P10911 925 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 CCNB1P14635 433 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 STIP1P31948 543 aaKnown RBP15.22■□□□□ 0.03
CNOT3-201ENST00000221232 GABRB2P47870 512 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 GBE1Q04446 702 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 MPP5Q8N3R9 675 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 PQLC3Q8N755 202 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 KANSL3Q9P2N6 904 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 TUBGCP4Q9UGJ1 667 aa15.22■□□□□ 0.03
CNOT3-201ENST00000221232 ZC3H7BQ9UGR2 993 aaKnown RBP15.22■□□□□ 0.03
CNOT3-201ENST00000221232 E7ESA3 106 aa15.21■□□□□ 0.03
CNOT3-201ENST00000221232 CYB561D2O14569 222 aa15.21■□□□□ 0.03
CNOT3-201ENST00000221232 APOL1O14791 398 aa15.21■□□□□ 0.03
CNOT3-201ENST00000221232 GABBR2O75899 941 aa15.21■□□□□ 0.03
CNOT3-201ENST00000221232 AKAP5P24588 427 aa15.21■□□□□ 0.03
CNOT3-201ENST00000221232 SDC4P31431 198 aa15.21■□□□□ 0.03
CNOT3-201ENST00000221232 CRADDP78560 199 aa15.21■□□□□ 0.03
CNOT3-201ENST00000221232 RIPK1Q13546 671 aa15.21■□□□□ 0.03
CNOT3-201ENST00000221232 ZNF276Q8N554 614 aa15.21■□□□□ 0.03
CNOT3-201ENST00000221232 MAGEC3Q8TD91 643 aa15.21■□□□□ 0.03
CNOT3-201ENST00000221232 SLC7A6OSQ96CW6 309 aaPredicted RBP15.21■□□□□ 0.03
CNOT3-201ENST00000221232 MYCBPQ99417 103 aaPredicted RBP15.21■□□□□ 0.03
CNOT3-201ENST00000221232 TSSK1BQ9BXA7 367 aa15.21■□□□□ 0.03
CNOT3-201ENST00000221232 ZNF408Q9H9D4 720 aa15.21■□□□□ 0.03
CNOT3-201ENST00000221232 CDHR5Q9HBB8 845 aa15.21■□□□□ 0.03
CNOT3-201ENST00000221232 PCDH18Q9HCL0 1135 aa15.21■□□□□ 0.03
CNOT3-201ENST00000221232 TEX264Q9Y6I9 313 aa15.21■□□□□ 0.03
CNOT3-201ENST00000221232 LTBP3Q9NS15 1303 aa15.21■□□□□ 0.03
CNOT3-201ENST00000221232 TSPAN1O60635 241 aa15.21■□□□□ 0.02
CNOT3-201ENST00000221232 DCTN3O75935 186 aa15.21■□□□□ 0.02
CNOT3-201ENST00000221232 TROVE2P10155 538 aaKnown RBP eCLIP15.21■□□□□ 0.02
CNOT3-201ENST00000221232 CCDC130P13994 396 aa15.21■□□□□ 0.02
CNOT3-201ENST00000221232 ELF1P32519 619 aa15.21■□□□□ 0.02
CNOT3-201ENST00000221232 CLNS1AP54105 237 aaKnown RBP15.21■□□□□ 0.02
CNOT3-201ENST00000221232 YWHAZP63104 245 aaKnown RBP15.21■□□□□ 0.02
CNOT3-201ENST00000221232 TNFAIP2Q03169 654 aa15.21■□□□□ 0.02
CNOT3-201ENST00000221232 TFDP2Q14188 446 aa15.21■□□□□ 0.02
CNOT3-201ENST00000221232 KCNJ11Q14654 390 aa15.21■□□□□ 0.02
CNOT3-201ENST00000221232 NAA25Q14CX7 972 aa15.21■□□□□ 0.02
CNOT3-201ENST00000221232 MDH1BQ5I0G3 518 aa15.21■□□□□ 0.02
CNOT3-201ENST00000221232 TRMT10BQ6PF06 316 aaKnown RBP15.21■□□□□ 0.02
CNOT3-201ENST00000221232 LCLAT1Q6UWP7 414 aa15.21■□□□□ 0.02
CNOT3-201ENST00000221232 RFX8Q6ZV50 586 aa15.21■□□□□ 0.02
CNOT3-201ENST00000221232 UNC5BQ8IZJ1 945 aa15.21■□□□□ 0.02
CNOT3-201ENST00000221232 TTC8Q8TAM2 541 aa15.21■□□□□ 0.02
CNOT3-201ENST00000221232 L3MBTL3Q96JM7 780 aaPredicted RBP15.21■□□□□ 0.02
CNOT3-201ENST00000221232 EIF2AQ9BY44 585 aaKnown RBP15.21■□□□□ 0.02
CNOT3-201ENST00000221232 SETD4Q9NVD3 440 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms