RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 GLP2RO95838 553 aa11.45□□□□□ -0.58
KNOP1-201ENST00000219837 ALBP02768 609 aa11.45□□□□□ -0.58
KNOP1-201ENST00000219837 TFE3P19532 575 aaPredicted RBP11.45□□□□□ -0.58
KNOP1-201ENST00000219837 KCNA3P22001 575 aa11.45□□□□□ -0.58
KNOP1-201ENST00000219837 KCNJ1P48048 391 aa11.45□□□□□ -0.58
KNOP1-201ENST00000219837 CSTF3Q12996 717 aaKnown RBP11.45□□□□□ -0.58
KNOP1-201ENST00000219837 ZNF280DQ6N043 979 aa11.45□□□□□ -0.58
KNOP1-201ENST00000219837 TRMT11Q7Z4G4 463 aaKnown RBP11.45□□□□□ -0.58
KNOP1-201ENST00000219837 ERP27Q96DN0 273 aa11.45□□□□□ -0.58
KNOP1-201ENST00000219837 MTG1Q9BT17 334 aaPredicted RBP11.45□□□□□ -0.58
KNOP1-201ENST00000219837 PIF1Q9H611 641 aa11.45□□□□□ -0.58
KNOP1-201ENST00000219837 DDX43Q9NXZ2 648 aaKnown RBP11.45□□□□□ -0.58
KNOP1-201ENST00000219837 E9PCH4 1651 aa11.45□□□□□ -0.58
KNOP1-201ENST00000219837 SSU72P8A0A1W2PR75 194 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 ITGALP20701 1170 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 PON1P27169 355 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 FEN1P39748 380 aaKnown RBP11.44□□□□□ -0.58
KNOP1-201ENST00000219837 CLYBLQ8N0X4 340 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 LPCAT1Q8NF37 534 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 CCNT2O60583 730 aaKnown RBP11.44□□□□□ -0.58
KNOP1-201ENST00000219837 CAPN15O75808 1086 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 PDK2Q15119 407 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 RABL6Q3YEC7 729 aaPredicted RBP11.44□□□□□ -0.58
KNOP1-201ENST00000219837 PCNX4Q63HM2 1172 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 OLFML2BQ68BL8 750 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 C16orf62Q7Z3J2 963 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 PTAR1Q7Z6K3 402 aaPredicted RBP11.44□□□□□ -0.58
KNOP1-201ENST00000219837 FBXO36Q8NEA4 188 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 PPP1R10Q96QC0 940 aaKnown RBP11.44□□□□□ -0.58
KNOP1-201ENST00000219837 CYP39A1Q9NYL5 469 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 CNTNAP4Q9C0A0 1308 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 E9PBE3 544 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 SMAPO00193 183 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 CDH16O75309 829 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 C2CD6Q53TS8 623 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 ICE2Q659A1 982 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 DNAJB3Q8WWF6 145 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 FBXO10Q9UK96 956 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 TECPR2O15040 1411 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 ZC3H13Q5T200 1668 aaKnown RBP11.44□□□□□ -0.58
KNOP1-201ENST00000219837 A0A1B0GW55 424 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 ZW10O43264 779 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 GLRA3O75311 464 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 MED24O75448 989 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 DUX4L2P0CJ85 424 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 DUX4L3P0CJ86 424 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 DUX4L4P0CJ87 422 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 DUX4L5P0CJ88 424 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 DUX4L6P0CJ89 424 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 DUX4L7P0CJ90 424 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 ARP10275 920 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 LAMTOR4Q0VGL1 99 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 CYP20A1Q6UW02 462 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 KIF2BQ8N4N8 673 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 TDRD5Q8NAT2 981 aaKnown RBP11.44□□□□□ -0.58
KNOP1-201ENST00000219837 TPCN2Q8NHX9 752 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 FAM111AQ96PZ2 611 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 FRMD8P1Q9BZ68 369 aaPredicted RBP11.44□□□□□ -0.58
KNOP1-201ENST00000219837 ROPN1BQ9BZX4 212 aaPredicted RBP11.44□□□□□ -0.58
KNOP1-201ENST00000219837 ROPN1Q9HAT0 212 aaPredicted RBP11.44□□□□□ -0.58
KNOP1-201ENST00000219837 DUX4Q9UBX2 424 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 TFR2Q9UP52 801 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 NCKAP1Q9Y2A7 1128 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 ALG6Q9Y672 507 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 C1orf167Q5SNV9 1468 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 TRIM49D1C9J1S8 452 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 KPNA6O60684 536 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 ZNF682O95780 498 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 ATP6V1C1P21283 382 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 BACE1P56817 501 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 MFSD10Q14728 455 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 GRIK4Q16099 956 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 KYNUQ16719 465 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 PPM1LQ5SGD2 360 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 USP7Q93009 1102 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 SPACA7Q96KW9 195 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 XPO6Q96QU8 1125 aaKnown RBP11.44□□□□□ -0.58
KNOP1-201ENST00000219837 USP18Q9UMW8 372 aa11.44□□□□□ -0.58
KNOP1-201ENST00000219837 FBXO21O94952 628 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 SOX6P35712 828 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 NFYCQ13952 458 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 PREPLQ4J6C6 727 aaPredicted RBP11.43□□□□□ -0.58
KNOP1-201ENST00000219837 TMC7Q7Z402 723 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 SETD3Q86TU7 594 aaPredicted RBP11.43□□□□□ -0.58
KNOP1-201ENST00000219837 TMEM176AQ96HP8 235 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 ILKAPQ9H0C8 392 aaPredicted RBP11.43□□□□□ -0.58
KNOP1-201ENST00000219837 TMCC3Q9ULS5 477 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 OGTO15294 1046 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 ENO2P09104 434 aaPredicted RBP11.43□□□□□ -0.58
KNOP1-201ENST00000219837 RBP3P10745 1247 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 AKAP5P24588 427 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 TARSP26639 723 aaKnown RBP11.43□□□□□ -0.58
KNOP1-201ENST00000219837 KLRC1P26715 233 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 GCLCP48506 637 aaPredicted RBP11.43□□□□□ -0.58
KNOP1-201ENST00000219837 TKTL1P51854 596 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 TRIM71Q2Q1W2 868 aaKnown RBP11.43□□□□□ -0.58
KNOP1-201ENST00000219837 TFDP3Q5H9I0 405 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 STRA8Q7Z7C7 330 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 SPIRE2Q8WWL2 714 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 KCTD14Q9BQ13 255 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms