RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 MAP3K7O43318 606 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 RGS20O76081 388 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 ANP32DO95626 131 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 CD48P09326 243 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 ACO1P21399 889 aaKnown RBP12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 EPHX2P34913 555 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 CDKN2BP42772 138 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 SERPINB9P50453 376 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 CACNB2Q08289 660 aaPredicted RBP12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 ZC3H12AQ5D1E8 599 aaKnown RBP12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 POLNQ7Z5Q5 900 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 C12orf42Q96LP6 360 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 EPAS1Q99814 870 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 FSD1LQ9BXM9 530 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 DDIT4Q9NX09 232 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 IQCA1LA6NCM1 817 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 ALOX15BO15296 676 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 B4GALT4O60513 344 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 ERBB2P04626 1255 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 ZNF143P52747 638 aaPredicted RBP12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 ELF3P78545 371 aaPredicted RBP12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 MMEL1Q495T6 779 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 PAN2Q504Q3 1202 aaKnown RBP12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 TAS1R3Q7RTX0 852 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 CYP4X1Q8N118 509 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 DNAJB3Q8WWF6 145 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 SPOCK2Q92563 424 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 PRCCQ92733 491 aaPredicted RBP12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 APOL2Q9BQE5 337 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 VCX3BQ9H321 246 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 TJP2Q9UDY2 1190 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 SSX2IPQ9Y2D8 614 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 MYH4Q9Y623 1939 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 PDHXO00330 501 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 OPHN1O60890 802 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 AVILO75366 819 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 CCDC130P13994 396 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 EPHB2P29323 1055 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 ELF1P32519 619 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 POU5F1Q01860 360 aaKnown RBP12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 RPS6KA2Q15349 733 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 KCNT2Q6UVM3 1135 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.81□□□□□ -0.361e-16■□□□□ 8.7
TM9SF4-201ENST00000217315 CCT6BQ92526 530 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 THTPAQ9BU02 230 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 TMEM109Q9BVC6 243 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 TRIM33Q9UPN9 1127 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 TIMM13Q9Y5L4 95 aaPredicted RBP12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 COL22A1Q8NFW1 1626 aaPredicted RBP12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 MSCO60682 206 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 TRUB2O95900 331 aaKnown RBP12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 LMNAP02545 664 aaKnown RBP12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 FAM200BP0CF97 657 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 SLC20A2Q08357 652 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 PTP4A2Q12974 167 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 EFTUD2Q15029 972 aaKnown RBP eCLIP12.81□□□□□ -0.362e-6■■□□□ 14.2
TM9SF4-201ENST00000217315 TAF1CQ15572 869 aaPredicted RBP12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 TMEM192Q8IY95 271 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 ABI1Q8IZP0 508 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 RYBPQ8N488 228 aaPredicted RBP12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 SLC2A14Q8TDB8 520 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 CD101Q93033 1021 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 GBP5Q96PP8 586 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 SHCBP1LQ9BZQ2 653 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 MYLK2Q9H1R3 596 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 GRID1Q9ULK0 1009 aa12.81□□□□□ -0.36
TM9SF4-201ENST00000217315 DNAJC8O75937 253 aaPredicted RBP12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 RECQL4O94761 1208 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 ABHD2P08910 425 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 SLC6A3Q01959 620 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 POU5F1BQ06416 359 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 ACAP1Q15027 740 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 MAP1SQ66K74 1059 aaPredicted RBP12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 ITPRIPL1Q6GPH6 555 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 ADGRF2Q8IZF7 708 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 KIRREL3Q8IZU9 778 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 GLIS1Q8NBF1 620 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 NSL1Q96IY1 281 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 PARK7Q99497 189 aaKnown RBP12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 LOC100653049A0A140TA62 436 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 KPNA7A9QM74 516 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 KCNK1O00180 336 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 TNPO2O14787 897 aaKnown RBP12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 KRT34O76011 436 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 POLBP06746 335 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 SERPINB4P48594 390 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 BST2Q10589 180 aaKnown RBP12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 TAF5Q15542 800 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 SLC27A1Q6PCB7 646 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 RNF135Q8IUD6 432 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 SUGP1Q8IWZ8 645 aaKnown RBP12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 RNF157Q96PX1 679 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 SNRNP25Q9BV90 132 aaKnown RBP12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 B3GNT5Q9BYG0 378 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 ELOVL4Q9GZR5 314 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 MID2Q9UJV3 735 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 ACTL7BQ9Y614 415 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 DDX60LQ5H9U9 1706 aaKnown RBP12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 TTLL13PA6NNM8 815 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms