RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 KLC2Q9H0B6 622 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 POPDC2Q9HBU9 364 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 FBXO6Q9NRD1 293 aaPredicted RBP13.84□□□□□ -0.19
SRP54-201ENST00000216774 ZC3H7BQ9UGR2 993 aaKnown RBP13.84□□□□□ -0.19
SRP54-201ENST00000216774 FZD1Q9UP38 647 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 PLLPQ9Y342 182 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 TRIM49D1C9J1S8 452 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 I3L4J1 428 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 AVILO75366 819 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 ITGB3P05106 788 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 MYL2P10916 166 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 ESRRAP11474 423 aaPredicted RBP13.84□□□□□ -0.19
SRP54-201ENST00000216774 PDGFRAP16234 1089 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 OSBPP22059 807 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 CCNFP41002 786 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 MRPS35P82673 323 aaKnown RBP13.84□□□□□ -0.19
SRP54-201ENST00000216774 MBTD1Q05BQ5 628 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 CDK18Q07002 472 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 KRT81Q14533 505 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 LY6KQ17RY6 165 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 BOLA3Q53S33 107 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 DALRD3Q5D0E6 543 aaKnown RBP13.84□□□□□ -0.19
SRP54-201ENST00000216774 PRAMEF18Q5VWM3 479 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 TRIM68Q6AZZ1 485 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 PRPF39Q86UA1 669 aaKnown RBP13.84□□□□□ -0.19
SRP54-201ENST00000216774 VPS52Q8N1B4 723 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 ARHGAP24Q8N264 748 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 TTC39CQ8N584 583 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 PLD5Q8N7P1 536 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 RAB3IL1Q8TBN0 382 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 TEKT4Q8WW24 435 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 RXFP2Q8WXD0 754 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 MTBPQ96DY7 904 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 CFAP36Q96G28 342 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 NLRP4Q96MN2 994 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 OSBPL1AQ9BXW6 950 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 NFKBIZQ9BYH8 718 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.84□□□□□ -0.19
SRP54-201ENST00000216774 ZFATQ9P243 1243 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 KIAA1257Q9ULG3 409 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 BCLAF3A2AJT9 711 aaKnown RBP13.83□□□□□ -0.2
SRP54-201ENST00000216774 FCHO1O14526 889 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 KCNN4O15554 427 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 NEBLO76041 1014 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 RARBP10826 455 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 CDC25CP30307 473 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 VHLP40337 213 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 SLC26A2P50443 739 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 EN1Q05925 392 aaPredicted RBP13.83□□□□□ -0.2
SRP54-201ENST00000216774 SH3PXD2AQ5TCZ1 1133 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 ATG16L1Q676U5 607 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 C1orf228Q6PIY5 440 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 DSTYKQ6XUX3 929 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 APBB1IPQ7Z5R6 666 aaPredicted RBP13.83□□□□□ -0.2
SRP54-201ENST00000216774 TMEM192Q8IY95 271 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 PPM1NQ8N819 430 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 MCUQ8NE86 351 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 HEXIM2Q96MH2 286 aaKnown RBP13.83□□□□□ -0.2
SRP54-201ENST00000216774 FAM167BQ9BTA0 163 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 TAS2R1Q9NYW7 299 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 A0A0G2JMZ2 1700 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 LRRC37A2A6NM11 1700 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 WDR90Q96KV7 1748 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 LACTBL1A8MY62 500 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 NFKBIEO00221 500 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 NOP56O00567 594 aaKnown RBP13.83□□□□□ -0.2
SRP54-201ENST00000216774 DPYSL4O14531 572 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 APOL1O14791 398 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 NVLO15381 856 aaKnown RBP13.83□□□□□ -0.2
SRP54-201ENST00000216774 ATP5BP06576 529 aaKnown RBP13.83□□□□□ -0.2
SRP54-201ENST00000216774 TNFAIP2Q03169 654 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 INCA1Q0VD86 236 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 MUM1Q2TAK8 710 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 CELF3Q5SZQ8 465 aaKnown RBP13.83□□□□□ -0.2
SRP54-201ENST00000216774 JADE1Q6IE81 842 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 ANO7Q6IWH7 933 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 TRNP1Q6NT89 227 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 LCLAT1Q6UWP7 414 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 CAND1Q86VP6 1230 aaKnown RBP13.83□□□□□ -0.2
SRP54-201ENST00000216774 TRIM50Q86XT4 487 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 APLFQ8IW19 511 aaPredicted RBP13.83□□□□□ -0.2
SRP54-201ENST00000216774 CTAGE3PQ8IX95 158 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 TBCBQ99426 244 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 MPHOSPH6Q99547 160 aaKnown RBP13.83□□□□□ -0.2
SRP54-201ENST00000216774 ASB7Q9H672 318 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 PRMT7Q9NVM4 692 aaPredicted RBP13.83□□□□□ -0.2
SRP54-201ENST00000216774 SIRPGQ9P1W8 387 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 BTBD7Q9P203 1132 aa13.83□□□□□ -0.2
SRP54-201ENST00000216774 BARX2Q9UMQ3 279 aaPredicted RBP13.83□□□□□ -0.2
SRP54-201ENST00000216774 A8MXQ7 604 aa13.82□□□□□ -0.2
SRP54-201ENST00000216774 ZNF487B1APH4 448 aa13.82□□□□□ -0.2
SRP54-201ENST00000216774 KRT38O76015 456 aa13.82□□□□□ -0.2
SRP54-201ENST00000216774 ZBED1O96006 694 aa13.82□□□□□ -0.2
SRP54-201ENST00000216774 STAG3L1P0CL83 205 aa13.82□□□□□ -0.2
SRP54-201ENST00000216774 MCF2P10911 925 aa13.82□□□□□ -0.2
SRP54-201ENST00000216774 IL4RP24394 825 aa13.82□□□□□ -0.2
SRP54-201ENST00000216774 BCAR1P56945 870 aa13.82□□□□□ -0.2
SRP54-201ENST00000216774 OCRLQ01968 901 aa13.82□□□□□ -0.2
SRP54-201ENST00000216774 KPNB1Q14974 876 aaKnown RBP13.82□□□□□ -0.2
SRP54-201ENST00000216774 CCDC6Q16204 474 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms