RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 PCCAP05165 728 aaPredicted RBP15.05■□□□□ 0
SPTLC2-201ENST00000216484 RESTQ13127 1097 aa15.05■□□□□ 0
SPTLC2-201ENST00000216484 NCOA4Q13772 614 aa15.05■□□□□ 0
SPTLC2-201ENST00000216484 ALKBH2Q6NS38 261 aa15.05■□□□□ 0
SPTLC2-201ENST00000216484 FAM117BQ6P1L5 589 aa15.05■□□□□ 0
SPTLC2-201ENST00000216484 HIST3H2AQ7L7L0 130 aa15.05■□□□□ 0
SPTLC2-201ENST00000216484 RAET1EQ8TD07 263 aa15.05■□□□□ 0
SPTLC2-201ENST00000216484 HIST1H2ACQ93077 130 aa15.05■□□□□ 0
SPTLC2-201ENST00000216484 PUS3Q9BZE2 481 aaKnown RBP15.05■□□□□ 0
SPTLC2-201ENST00000216484 GSTK1Q9Y2Q3 226 aa15.05■□□□□ 0
SPTLC2-201ENST00000216484 PRAG1Q86YV5 1406 aa15.05■□□□□ 0
SPTLC2-201ENST00000216484 ASB14A6NK59 587 aa15.05■□□□□ 0
SPTLC2-201ENST00000216484 PHGDHO43175 533 aaKnown RBP15.05■□□□□ 0
SPTLC2-201ENST00000216484 HS6ST1O60243 411 aa15.05■□□□□ 0
SPTLC2-201ENST00000216484 MAPK10P53779 464 aa15.05■□□□□ 0
SPTLC2-201ENST00000216484 STARD3Q14849 445 aa15.05■□□□□ 0
SPTLC2-201ENST00000216484 PYDC2Q56P42 97 aa15.05■□□□□ 0
SPTLC2-201ENST00000216484 NSUN6Q8TEA1 469 aaKnown RBP15.05■□□□□ 0
SPTLC2-201ENST00000216484 USP7Q93009 1102 aa15.05■□□□□ 0
SPTLC2-201ENST00000216484 JPH1Q9HDC5 661 aaPredicted RBP15.05■□□□□ 0
SPTLC2-201ENST00000216484 AGAP1Q9UPQ3 857 aa15.05■□□□□ 0
SPTLC2-201ENST00000216484 MYH13Q9UKX3 1938 aa15.05■□□□□ 0
SPTLC2-201ENST00000216484 CLK2P49760 499 aaKnown RBP15.05■□□□□ -0
SPTLC2-201ENST00000216484 BARGINQ6ZT62 677 aa15.05■□□□□ -0
SPTLC2-201ENST00000216484 ARHGAP22Q7Z5H3 698 aa15.05■□□□□ -0
SPTLC2-201ENST00000216484 SPACA7Q96KW9 195 aa15.05■□□□□ -0
SPTLC2-201ENST00000216484 COL17A1Q9UMD9 1497 aaPredicted RBP15.05■□□□□ -0
SPTLC2-201ENST00000216484 NPHP3-ACAD11A0A0J9YXS1 232 aa15.05■□□□□ -0
SPTLC2-201ENST00000216484 KRT33AO76009 404 aa15.05■□□□□ -0
SPTLC2-201ENST00000216484 LCA5LO95447 670 aa15.05■□□□□ -0
SPTLC2-201ENST00000216484 ITGA8P53708 1063 aa15.05■□□□□ -0
SPTLC2-201ENST00000216484 ITGADQ13349 1161 aa15.05■□□□□ -0
SPTLC2-201ENST00000216484 MLH3Q9UHC1 1453 aa15.05■□□□□ -0
SPTLC2-201ENST00000216484 FASP25445 335 aa15.05■□□□□ -0
SPTLC2-201ENST00000216484 BIKQ13323 160 aa15.05■□□□□ -0
SPTLC2-201ENST00000216484 CYB5D1Q6P9G0 228 aa15.05■□□□□ -0
SPTLC2-201ENST00000216484 SH3RF3Q8TEJ3 882 aaPredicted RBP15.05■□□□□ -0
SPTLC2-201ENST00000216484 WRNIP1Q96S55 665 aa15.05■□□□□ -0
SPTLC2-201ENST00000216484 CAB39LQ9H9S4 337 aa15.05■□□□□ -0
SPTLC2-201ENST00000216484 ZNF879B4DU55 563 aa15.05■□□□□ -0
SPTLC2-201ENST00000216484 INPP4BO15327 924 aa15.05■□□□□ -0
SPTLC2-201ENST00000216484 CD2BP2O95400 341 aaKnown RBP15.05■□□□□ -0
SPTLC2-201ENST00000216484 FGFR1P11362 822 aa15.05■□□□□ -0
SPTLC2-201ENST00000216484 IFNGR2P38484 337 aa15.05■□□□□ -0
SPTLC2-201ENST00000216484 EPS8Q12929 822 aa15.05■□□□□ -0
SPTLC2-201ENST00000216484 PYHIN1Q6K0P9 492 aa15.05■□□□□ -0
SPTLC2-201ENST00000216484 DGCR6LQ9BY27 220 aa15.05■□□□□ -0
SPTLC2-201ENST00000216484 CHORDC1Q9UHD1 332 aaPredicted RBP15.05■□□□□ -0
SPTLC2-201ENST00000216484 UBE2QL1A1L167 161 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 PSIP1O75475 530 aaKnown RBP15.04■□□□□ -0
SPTLC2-201ENST00000216484 ACADMP11310 421 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 ADARP55265 1226 aaKnown RBP15.04■□□□□ -0
SPTLC2-201ENST00000216484 MSANTD1Q6ZTZ1 278 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 WDCPQ9H6R7 721 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 APEX2Q9UBZ4 518 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 SLC29A2Q14542 456 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 ABRAXAS1Q6UWZ7 409 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 CCDC115Q96NT0 180 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 SLC4A9Q96Q91 983 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 CASZ1Q86V15 1759 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 AHCYL1O43865 530 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 SNX4O95219 450 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 CRKLP46109 303 aaKnown RBP15.04■□□□□ -0
SPTLC2-201ENST00000216484 USPL1Q5W0Q7 1092 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 FAM9CQ8IZT9 166 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 CMTM6Q9NX76 183 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 ZNF112Q9UJU3 913 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 POLR1AO95602 1720 aaPredicted RBP15.04■□□□□ -0
SPTLC2-201ENST00000216484 TTLL13PA6NNM8 815 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 SNUPNO95149 360 aaKnown RBP15.04■□□□□ -0
SPTLC2-201ENST00000216484 ZNF37AP17032 561 aaPredicted RBP15.04■□□□□ -0
SPTLC2-201ENST00000216484 IL13P35225 146 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 DALRD3Q5D0E6 543 aaKnown RBP15.04■□□□□ -0
SPTLC2-201ENST00000216484 TBCELQ5QJ74 424 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 C3orf20Q8ND61 904 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 BTBD9Q96Q07 612 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 RSPH9Q9H1X1 276 aaPredicted RBP15.04■□□□□ -0
SPTLC2-201ENST00000216484 BTBD7Q9P203 1132 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 USP27XA6NNY8 438 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 POLRMTO00411 1230 aaKnown RBP15.04■□□□□ -0
SPTLC2-201ENST00000216484 PLA2G6O60733 806 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 NQO1P15559 274 aaKnown RBP15.04■□□□□ -0
SPTLC2-201ENST00000216484 HSF2Q03933 536 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 CCDC153Q494R4 210 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 SMYD1Q8NB12 490 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 EFR3BQ9Y2G0 817 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 PLB1Q6P1J6 1458 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 ADCY6O43306 1168 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 PPIDQ08752 370 aaKnown RBP15.04■□□□□ -0
SPTLC2-201ENST00000216484 IZUMO2Q6UXV1 221 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 MTSS1LQ765P7 747 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 DCLRE1BQ9H816 532 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 PHTF1Q9UMS5 762 aa15.04■□□□□ -0
SPTLC2-201ENST00000216484 RPAP1Q9BWH6 1393 aaPredicted RBP15.04■□□□□ -0
SPTLC2-201ENST00000216484 PRG2P13727 222 aa15.03■□□□□ -0
SPTLC2-201ENST00000216484 OR1G1P47890 313 aa15.03■□□□□ -0
SPTLC2-201ENST00000216484 LRRC6Q86X45 466 aa15.03■□□□□ -0
SPTLC2-201ENST00000216484 DNAJC1Q96KC8 554 aaKnown RBP15.03■□□□□ -0
SPTLC2-201ENST00000216484 C1orf50Q9BV19 199 aa15.03■□□□□ -0
SPTLC2-201ENST00000216484 ABCA5Q8WWZ7 1642 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms