RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 DDHD1Q8NEL9 900 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 SRPK1Q96SB4 655 aaKnown RBP11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 ORC6Q9Y5N6 252 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 ACTL7BQ9Y614 415 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 CDY2AQ9Y6F7 541 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 CDY1Q9Y6F8 540 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 TISP43B9A030 160 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 WFS1O76024 890 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 ZBTB48P10074 688 aaPredicted RBP11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 PRKAR2AP13861 404 aaKnown RBP11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 IL10P22301 178 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 PLOD1Q02809 727 aaPredicted RBP11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 FAAP100Q0VG06 881 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 SURF1Q15526 300 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 DUOXA2Q1HG44 320 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 KHDC1Q4VXA5 237 aaKnown RBP11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 MFSD5Q6N075 450 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 TTC33Q6PID6 262 aaPredicted RBP11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 RIPOR1Q6ZS17 1223 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 CLNKQ7Z7G1 428 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 MCOLN2Q8IZK6 566 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 ZCCHC9Q8N567 271 aaKnown RBP11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 PBXIP1Q96AQ6 731 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 GCOM2Q9BZD3 368 aaPredicted RBP11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 ADNPQ9H2P0 1102 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 KCTD10Q9H3F6 313 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 GALNT8Q9NY28 637 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 A0A1W2PPM1 405 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 HNRNPRO43390 633 aaKnown RBP11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 TPBGLP0DKB5 382 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 SLC12A3P55017 1021 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 BEX3Q00994 111 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 TAF12Q16514 161 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 SPOCD1Q6ZMY3 1216 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 ZNF677Q86XU0 584 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 KIAA2013Q8IYS2 634 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 JADE3Q92613 823 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 VPS39Q96JC1 886 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 ZNF317Q96PQ6 595 aaPredicted RBP11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 ARHGEF3Q9NR81 526 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 ARL8BQ9NVJ2 186 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 ARHGEF37A1IGU5 675 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 C2CD2LO14523 706 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 ADAMTS3O15072 1205 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 VCPP55072 806 aaKnown RBP11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 SLC25A3Q00325 362 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 ECM1Q16610 540 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 MAPK6Q16659 721 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 CLEC16AQ2KHT3 1053 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 ASTE1Q2TB18 679 aaPredicted RBP11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 PPP1R15BQ5SWA1 713 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 LPCAT2Q7L5N7 544 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 GPR142Q7Z601 462 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 TRABD2AQ86V40 505 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 SENP6Q9GZR1 1112 aaPredicted RBP11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 LRRC19Q9H756 370 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 PCDH9Q9HC56 1237 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 PACSIN3Q9UKS6 424 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 PCDHA10Q9Y5I2 948 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 SNX13Q9Y5W8 968 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 MARF1Q9Y4F3 1742 aaKnown RBP11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 NCANO14594 1321 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 IGSF9BQ9UPX0 1349 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 SMAPO00193 183 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 ABLIM1O14639 778 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 E2F6O75461 281 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 USP1O94782 785 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 FESP07332 822 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 ANPEPP15144 967 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 PPP3CAQ08209 521 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 TMEM132BQ14DG7 1078 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 TTC27Q6P3X3 843 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 C4orf50Q6ZRC1 276 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 IFNL1Q8IU54 200 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 GMCL1Q96IK5 515 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 LRRC4Q9HBW1 653 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 C5P01031 1676 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 GPR25O00155 361 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 GSTA4O15217 222 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 DDX3YO15523 660 aaKnown RBP11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 RGS7P49802 495 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 FAM43BQ6ZT52 329 aaPredicted RBP11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 PALB2Q86YC2 1186 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 OR6B3Q8NGW1 331 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 UCMAQ8WVF2 138 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 WDR60Q8WVS4 1066 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 ATP6V1E2Q96A05 226 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 TMEM143Q96AN5 459 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 PAIP1Q9H074 479 aaKnown RBP11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 CREBZFQ9NS37 354 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 PKD2L2Q9NZM6 624 aa11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 FNDC3AQ9Y2H6 1198 aaKnown RBP11.94□□□□□ -0.5
DNMT3B-201ENST00000201963 MROH7Q68CQ1 1323 aa11.93□□□□□ -0.5
DNMT3B-201ENST00000201963 GSC2O15499 205 aa11.93□□□□□ -0.5
DNMT3B-201ENST00000201963 SH3BP5O60239 455 aa11.93□□□□□ -0.5
DNMT3B-201ENST00000201963 BANF1O75531 89 aa11.93□□□□□ -0.5
DNMT3B-201ENST00000201963 FAM58BPP0C7Q3 252 aa11.93□□□□□ -0.5
DNMT3B-201ENST00000201963 HSPA1AP0DMV8 641 aaKnown RBP11.93□□□□□ -0.5
DNMT3B-201ENST00000201963 HSPA1BP0DMV9 641 aaKnown RBP11.93□□□□□ -0.5
DNMT3B-201ENST00000201963 SFNP31947 248 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms