RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 STK39Q9UEW8 545 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 IGSF9BQ9UPX0 1349 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 MFN2O95140 757 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 ATG7O95352 703 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 ALDH1A3P47895 512 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 ZNF543Q08ER8 600 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 TRAPPC9Q96Q05 1148 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 PAFAH2Q99487 392 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 PIF1Q9H611 641 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 CYLDQ9NQC7 956 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 PHGDHO43175 533 aaKnown RBP17.7■□□□□ 0.42
ITGB4-201ENST00000200181 NDUFB5O43674 189 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 CATSPER2Q96P56 530 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 LRRC40Q9H9A6 602 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 TFR2Q9UP52 801 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 UPP2O95045 317 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 RBP1P09455 135 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 SLC2A3P11169 496 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 BGNP21810 368 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 OR1G1P47890 313 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 FAM98BQ52LJ0 330 aaKnown RBP17.7■□□□□ 0.42
ITGB4-201ENST00000200181 KLHL24Q6TFL4 600 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 TRPC4APQ8TEL6 797 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 SCUBE2Q9NQ36 999 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 CDK12Q9NYV4 1490 aaPredicted RBP17.7■□□□□ 0.42
ITGB4-201ENST00000200181 BAIAP3O94812 1187 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 ZSWIM7Q19AV6 140 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 TRMT5Q32P41 509 aaKnown RBP17.7■□□□□ 0.42
ITGB4-201ENST00000200181 ZNF438Q7Z4V0 828 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 MAGED4Q96JG8 741 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 MAML3Q96JK9 1138 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 KLHL1Q9NR64 748 aa17.7■□□□□ 0.42
ITGB4-201ENST00000200181 STX4Q12846 297 aa17.69■□□□□ 0.42
ITGB4-201ENST00000200181 POLD3Q15054 466 aaPredicted RBP17.69■□□□□ 0.42
ITGB4-201ENST00000200181 FAM228AQ86W67 206 aa17.69■□□□□ 0.42
ITGB4-201ENST00000200181 CACTIN-AS1Q8N1I8 211 aa17.69■□□□□ 0.42
ITGB4-201ENST00000200181 ATG4AQ8WYN0 398 aa17.69■□□□□ 0.42
ITGB4-201ENST00000200181 NARS2Q96I59 477 aaKnown RBP17.69■□□□□ 0.42
ITGB4-201ENST00000200181 KIFC1Q9BW19 673 aa17.69■□□□□ 0.42
ITGB4-201ENST00000200181 NARFQ9UHQ1 456 aa17.69■□□□□ 0.42
ITGB4-201ENST00000200181 ALOX12P18054 663 aa17.69■□□□□ 0.42
ITGB4-201ENST00000200181 TIGD7Q6NT04 549 aaPredicted RBP17.69■□□□□ 0.42
ITGB4-201ENST00000200181 STOX1Q6ZVD7 989 aa17.69■□□□□ 0.42
ITGB4-201ENST00000200181 IKBIPQ70UQ0 350 aa17.69■□□□□ 0.42
ITGB4-201ENST00000200181 NECAB2Q7Z6G3 386 aa17.69■□□□□ 0.42
ITGB4-201ENST00000200181 STRA8Q7Z7C7 330 aa17.69■□□□□ 0.42
ITGB4-201ENST00000200181 CDK20Q8IZL9 346 aa17.69■□□□□ 0.42
ITGB4-201ENST00000200181 PRMT7Q9NVM4 692 aaPredicted RBP17.69■□□□□ 0.42
ITGB4-201ENST00000200181 DDX18Q9NVP1 670 aaKnown RBP17.69■□□□□ 0.42
ITGB4-201ENST00000200181 COL15A1P39059 1388 aa17.69■□□□□ 0.42
ITGB4-201ENST00000200181 DYNC1LI2O43237 492 aaPredicted RBP17.69■□□□□ 0.42
ITGB4-201ENST00000200181 IL6P05231 212 aa17.69■□□□□ 0.42
ITGB4-201ENST00000200181 ATP6V1C1P21283 382 aa17.69■□□□□ 0.42
ITGB4-201ENST00000200181 ZNF772Q68DY9 489 aaPredicted RBP17.69■□□□□ 0.42
ITGB4-201ENST00000200181 AHI1Q8N157 1196 aa17.69■□□□□ 0.42
ITGB4-201ENST00000200181 RMND5BQ96G75 393 aaPredicted RBP17.69■□□□□ 0.42
ITGB4-201ENST00000200181 NFICP08651 508 aa17.69■□□□□ 0.42
ITGB4-201ENST00000200181 PNPLA4P41247 253 aa17.69■□□□□ 0.42
ITGB4-201ENST00000200181 GSTA3Q16772 222 aa17.69■□□□□ 0.42
ITGB4-201ENST00000200181 AGKQ53H12 422 aa17.69■□□□□ 0.42
ITGB4-201ENST00000200181 GLB1LQ6UWU2 654 aa17.69■□□□□ 0.42
ITGB4-201ENST00000200181 DEFB107AQ8IZN7 70 aa17.69■□□□□ 0.42
ITGB4-201ENST00000200181 MOSPD2Q8NHP6 518 aa17.69■□□□□ 0.42
ITGB4-201ENST00000200181 PHACTR1Q9C0D0 580 aa17.69■□□□□ 0.42
ITGB4-201ENST00000200181 DDIT4Q9NX09 232 aa17.69■□□□□ 0.42
ITGB4-201ENST00000200181 ERAP1Q9NZ08 941 aa17.69■□□□□ 0.42
ITGB4-201ENST00000200181 NPTXRO95502 500 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 SLC11A2P49281 568 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 CUL2Q13617 745 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 ITGA9Q13797 1035 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 CASP12Q6UXS9 341 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 GDPD5Q8WTR4 605 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 FIG4Q92562 907 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 KAT2BQ92831 832 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 GPRASP2Q96D09 838 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 RXFP1Q9HBX9 757 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 UBDO15205 165 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 TM9SF1O15321 606 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 ASS1P00966 412 aaKnown RBP17.68■□□□□ 0.42
ITGB4-201ENST00000200181 PBLDP30039 288 aaPredicted RBP17.68■□□□□ 0.42
ITGB4-201ENST00000200181 TAF6P49848 677 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 DGUOKQ16854 277 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 ARHGAP15Q53QZ3 475 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 KRT74Q7RTS7 529 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 ARHGAP22Q7Z5H3 698 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 EID3Q8N140 333 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 OSCP1Q8WVF1 389 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 STN1Q9H668 368 aaKnown RBP17.68■□□□□ 0.42
ITGB4-201ENST00000200181 MTMR4Q9NYA4 1195 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 SLC25A13Q9UJS0 675 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 ITGB3P05106 788 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 CPA3P15088 417 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 ERVK-7P63135 1459 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 GRK3P35626 688 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 TSNQ15631 228 aaKnown RBP17.68■□□□□ 0.42
ITGB4-201ENST00000200181 KCNT1Q5JUK3 1230 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 EFCAB12Q6NXP0 572 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 RIPOR1Q6ZS17 1223 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 SEPHS2Q99611 448 aa17.68■□□□□ 0.42
ITGB4-201ENST00000200181 CLPBQ9H078 707 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms