RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 OTUD1Q5VV17 481 aaPredicted RBP16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 STRADAQ7RTN6 431 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 BNIPLQ7Z465 357 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 THEM5Q8N1Q8 247 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 KCTD6Q8NC69 237 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 FAM149B1Q96BN6 582 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 CCDC114Q96M63 670 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 SLC2A13Q96QE2 648 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 FMO2Q99518 471 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 SNRNP25Q9BV90 132 aaKnown RBP16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 PPP1R12CQ9BZL4 782 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 CNGB3Q9NQW8 809 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 DNPEPQ9ULA0 475 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 PRG3Q9Y2Y8 225 aaPredicted RBP16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 MKI67P46013 3256 aaKnown RBP16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 COL4A6Q14031 1691 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 HOXA2O43364 376 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 GATMP50440 423 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 CDH6P55285 790 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 CCL23P55773 120 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 YWHAZP63104 245 aaKnown RBP16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 DPYSL3Q14195 570 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 OASLQ15646 514 aaKnown RBP16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 LRRTM3Q86VH5 581 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 VSIG1Q86XK7 387 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 NPAS4Q8IUM7 802 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 DEFB106AQ8N104 65 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 FAM71BQ8TC56 605 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 DIS3LQ8TF46 1054 aaKnown RBP16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 NDRG1Q92597 394 aaKnown RBP16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 NKD2Q969F2 451 aaPredicted RBP16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 NT5C3BQ969T7 300 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 CALN1Q9BXU9 219 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 ULBP1Q9BZM6 244 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 FAM129AQ9BZQ8 928 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 NRDE2Q9H7Z3 1164 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 PNPLA8Q9NP80 782 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 DMAP1Q9NPF5 467 aaPredicted RBP16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 TBX21Q9UL17 535 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 H3BQF6 201 aa16.3■□□□□ 0.2
LAPTM4A-201ENST00000175091 CST8O60676 142 aa16.3■□□□□ 0.2
LAPTM4A-201ENST00000175091 OAZ2O95190 189 aa16.3■□□□□ 0.2
LAPTM4A-201ENST00000175091 RABGGTBP53611 331 aa16.3■□□□□ 0.2
LAPTM4A-201ENST00000175091 BYSLQ13895 437 aaKnown RBP16.3■□□□□ 0.2
LAPTM4A-201ENST00000175091 SLC25A52Q3SY17 297 aa16.3■□□□□ 0.2
LAPTM4A-201ENST00000175091 SCYL2Q6P3W7 929 aa16.3■□□□□ 0.2
LAPTM4A-201ENST00000175091 SLC35B2Q8TB61 432 aa16.3■□□□□ 0.2
LAPTM4A-201ENST00000175091 FBXO25Q8TCJ0 367 aa16.3■□□□□ 0.2
LAPTM4A-201ENST00000175091 MRPL9Q9BYD2 267 aaKnown RBP16.3■□□□□ 0.2
LAPTM4A-201ENST00000175091 FRMD8P1Q9BZ68 369 aaPredicted RBP16.3■□□□□ 0.2
LAPTM4A-201ENST00000175091 CALCOCO1Q9P1Z2 691 aa16.3■□□□□ 0.2
LAPTM4A-201ENST00000175091 LRFN2Q9ULH4 789 aa16.3■□□□□ 0.2
LAPTM4A-201ENST00000175091 NRP1O14786 923 aa16.29■□□□□ 0.2
LAPTM4A-201ENST00000175091 SYN3O14994 580 aa16.29■□□□□ 0.2
LAPTM4A-201ENST00000175091 TRAPPC3O43617 180 aa16.29■□□□□ 0.2
LAPTM4A-201ENST00000175091 BDNFP23560 247 aa16.29■□□□□ 0.2
LAPTM4A-201ENST00000175091 CYP2C18P33260 490 aa16.29■□□□□ 0.2
LAPTM4A-201ENST00000175091 NOS2P35228 1153 aa16.29■□□□□ 0.2
LAPTM4A-201ENST00000175091 SULT1E1P49888 294 aa16.29■□□□□ 0.2
LAPTM4A-201ENST00000175091 ATXN1P54253 815 aaKnown RBP16.29■□□□□ 0.2
LAPTM4A-201ENST00000175091 VCPP55072 806 aaKnown RBP16.29■□□□□ 0.2
LAPTM4A-201ENST00000175091 GPS2Q13227 327 aa16.29■□□□□ 0.2
LAPTM4A-201ENST00000175091 PDK2Q15119 407 aa16.29■□□□□ 0.2
LAPTM4A-201ENST00000175091 FBXO46Q6PJ61 603 aaPredicted RBP16.29■□□□□ 0.2
LAPTM4A-201ENST00000175091 BHLHA9Q7RTU4 235 aa16.29■□□□□ 0.2
LAPTM4A-201ENST00000175091 TMC3Q7Z5M5 1100 aa16.29■□□□□ 0.2
LAPTM4A-201ENST00000175091 CTU1Q7Z7A3 348 aaKnown RBP16.29■□□□□ 0.2
LAPTM4A-201ENST00000175091 TTC13Q8NBP0 860 aa16.29■□□□□ 0.2
LAPTM4A-201ENST00000175091 ARMC5Q96C12 935 aa16.29■□□□□ 0.2
LAPTM4A-201ENST00000175091 LRRC45Q96CN5 670 aa16.29■□□□□ 0.2
LAPTM4A-201ENST00000175091 HAUS1Q96CS2 278 aa16.29■□□□□ 0.2
LAPTM4A-201ENST00000175091 POPDC2Q9HBU9 364 aa16.29■□□□□ 0.2
LAPTM4A-201ENST00000175091 PCDH18Q9HCL0 1135 aa16.29■□□□□ 0.2
LAPTM4A-201ENST00000175091 MARCH5Q9NX47 278 aa16.29■□□□□ 0.2
LAPTM4A-201ENST00000175091 WHRNQ9P202 907 aa16.29■□□□□ 0.2
LAPTM4A-201ENST00000175091 ADAM28Q9UKQ2 775 aa16.29■□□□□ 0.2
LAPTM4A-201ENST00000175091 PLXNA3P51805 1871 aa16.29■□□□□ 0.2
LAPTM4A-201ENST00000175091 GOLGA6BA6NDN3 693 aa16.28■□□□□ 0.2
LAPTM4A-201ENST00000175091 ZNF487B1APH4 448 aa16.28■□□□□ 0.2
LAPTM4A-201ENST00000175091 APOC4-APOC2K7ER74 178 aa16.28■□□□□ 0.2
LAPTM4A-201ENST00000175091 AGPSO00116 658 aa16.28■□□□□ 0.2
LAPTM4A-201ENST00000175091 TP73O15350 636 aa16.28■□□□□ 0.2
LAPTM4A-201ENST00000175091 APOC2P02655 101 aa16.28■□□□□ 0.2
LAPTM4A-201ENST00000175091 IVDP26440 423 aa16.28■□□□□ 0.2
LAPTM4A-201ENST00000175091 KLRC2P26717 231 aa16.28■□□□□ 0.2
LAPTM4A-201ENST00000175091 PLTPP55058 493 aa16.28■□□□□ 0.2
LAPTM4A-201ENST00000175091 DYNLT1P63172 113 aa16.28■□□□□ 0.2
LAPTM4A-201ENST00000175091 OTUD4Q01804 1114 aaKnown RBP16.28■□□□□ 0.2
LAPTM4A-201ENST00000175091 LMNB2Q03252 620 aa16.28■□□□□ 0.2
LAPTM4A-201ENST00000175091 DPYSL2Q16555 572 aa16.28■□□□□ 0.2
LAPTM4A-201ENST00000175091 CA9Q16790 459 aa16.28■□□□□ 0.2
LAPTM4A-201ENST00000175091 ZC3H12AQ5D1E8 599 aaKnown RBP16.28■□□□□ 0.2
LAPTM4A-201ENST00000175091 C4orf50Q6ZRC1 276 aa16.28■□□□□ 0.2
LAPTM4A-201ENST00000175091 HFE2Q6ZVN8 426 aa16.28■□□□□ 0.2
LAPTM4A-201ENST00000175091 MAP7D3Q8IWC1 876 aa16.28■□□□□ 0.2
LAPTM4A-201ENST00000175091 ACTL9Q8TC94 416 aa16.28■□□□□ 0.2
LAPTM4A-201ENST00000175091 ART4Q93070 314 aa16.28■□□□□ 0.2
LAPTM4A-201ENST00000175091 NPY6RQ99463 290 aa16.28■□□□□ 0.2
LAPTM4A-201ENST00000175091 ZNF670Q9BS34 389 aa16.28■□□□□ 0.2
LAPTM4A-201ENST00000175091 GPATCH2LQ9NWQ4 482 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms