RNA–Protein interactions for RNA: ENSMUST00000223097.1

Ccdc88c-204, Transcript of Protein Daple, mousemouse

TSL 1 (best) BASIC

Gene Ccdc88c, Length 1,253 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-204ENSMUST00000223097 Csnk1g1Q8BTH8 459 aa15.27■□□□□ 0.04
Ccdc88c-204ENSMUST00000223097 Trmt10aQ8C1Z8 328 aaKnown RBP15.27■□□□□ 0.04
Ccdc88c-204ENSMUST00000223097 Parp9Q8CAS9 866 aa15.27■□□□□ 0.04
Ccdc88c-204ENSMUST00000223097 Zmiz2Q8CIE2 920 aa15.27■□□□□ 0.04
Ccdc88c-204ENSMUST00000223097 Mark1Q8VHJ5 795 aa15.27■□□□□ 0.04
Ccdc88c-204ENSMUST00000223097 Galnt15Q9D2N8 638 aa15.27■□□□□ 0.04
Ccdc88c-204ENSMUST00000223097 Fbxl12Q9EPX5 326 aa15.27■□□□□ 0.04
Ccdc88c-204ENSMUST00000223097 Cacng3Q9JJV5 315 aa15.27■□□□□ 0.04
Ccdc88c-204ENSMUST00000223097 Tlr5Q9JLF7 859 aa15.27■□□□□ 0.04
Ccdc88c-204ENSMUST00000223097 Dnase2bQ9QY48 354 aa15.27■□□□□ 0.04
Ccdc88c-204ENSMUST00000223097 Dnajb8Q9QYI7 227 aa15.27■□□□□ 0.04
Ccdc88c-204ENSMUST00000223097 Atg2bQ80XK6 2075 aa15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Fam83cA2ARK0 776 aa15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Slfn8B1ARD8 910 aa15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Lrrc73B2RWC4 316 aa15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Gm2956E9PVJ0 216 aa15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Olfr1022L7MTT3 315 aa15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 FurinP23188 793 aa15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Man1a2P39098 641 aa15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 CidecP56198 239 aa15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Timm13P62075 95 aa15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Ezh1P70351 747 aa15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Taar7aQ5QD12 358 aa15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Mgat5bQ765H6 792 aa15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Stk40Q7TNL3 435 aa15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Frmd4aQ8BIE6 1020 aa15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Aste1Q8BIR2 672 aa15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Parp12Q8BZ20 711 aaKnown RBP15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Afap1l1Q8BZI0 768 aa15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Dusp15Q8R4V2 235 aa15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Sh3kbp1Q8R550 709 aaKnown RBP15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Olfr478Q8VG04 314 aa15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Recql5Q8VID5 982 aa15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Twf1Q91YR1 350 aaKnown RBP15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Macrod1Q922B1 323 aa15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 SardhQ99LB7 919 aa15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Trmt11Q9CWH5 460 aa15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Rin2Q9D684 903 aa15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Sphk2Q9JIA7 617 aa15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Tjp2Q9Z0U1 1167 aaKnown RBP15.26■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Igkv10-95A0A0G2JFY3 115 aa15.25■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 1700011I03RikE9PYL8 271 aa15.25■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Prdm15E9Q8T2 1174 aa15.25■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Gm8108K7N734 216 aa15.25■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Ctnnd1P30999 938 aaKnown RBP15.25■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Fam171bQ14CH0 825 aa15.25■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Gpr149Q3UVY1 732 aa15.25■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Q3UZV7 1028 aa15.25■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 EndouQ3V188 412 aa15.25■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Afg1lQ3V384 480 aa15.25■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Sun3Q5SS91 320 aa15.25■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Gpr17Q6NS65 339 aa15.25■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Cmtr2Q8BWQ4 767 aa15.25■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Ldlrap1Q8C142 308 aa15.25■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Gatad2aQ8CHY6 629 aaKnown RBP15.25■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 HnrnplQ8R081 586 aaKnown RBP15.25■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Olfr1233Q8VGN0 305 aa15.25■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Chordc1Q9D1P4 331 aaKnown RBP15.25■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Tcirg1Q9JHF5 834 aa15.25■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Tex21Q9R0U9 575 aa15.25■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 SetxA2AKX3 2646 aa15.25■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Rai1Q61818 1889 aa15.25■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Lcmt1A0A0U1RNF2 332 aa15.24■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Abcb5B5X0E4 1255 aa15.24■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Gimap9G3X987 291 aa15.24■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 4930544D05RikJ3QK56 214 aa15.24■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Nell1Q2VWQ2 810 aa15.24■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Ephx3Q3V1F8 367 aa15.24■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Fam46cQ5SSF7 391 aa15.24■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 CttnQ60598 546 aaKnown RBP15.24■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Slc13a5Q67BT3 572 aa15.24■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Q6PD19 689 aa15.24■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Znf628Q8CJ78 1038 aa15.24■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Pop1Q8K205 1045 aa15.24■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Med25Q8VCB2 745 aa15.24■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Lysmd3Q99LE3 305 aa15.24■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 NaspQ99MD9 773 aaKnown RBP15.24■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Wdr45bQ9CR39 344 aa15.24■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Q9D4A5 307 aa15.24■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Stx6Q9JKK1 255 aa15.24■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Auts2A0A087WPF7 1261 aa15.23■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Gm12394A2AKP6 982 aa15.23■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Fam129cD3YZB0 591 aa15.23■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Gm597E9Q8J5 896 aa15.23■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Taf4E9QAP7 1042 aaKnown RBP15.23■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 A630095N17RikJ3KMM7 116 aa15.23■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Pla2g4bP0C871 782 aa15.23■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Cnr2P47936 347 aa15.23■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Cpa2Q504N0 417 aa15.23■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Gpr19Q61121 415 aa15.23■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Gstt1Q64471 240 aa15.23■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Cep135Q6P5D4 1140 aa15.23■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 TifaQ793I8 184 aa15.23■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Olfr119Q7TRJ5 321 aa15.23■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Olfr698Q7TRN4 311 aa15.23■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Erlin2Q8BFZ9 340 aa15.23■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Znf775Q8BI73 538 aa15.23■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Ubald2Q8BQH4 164 aa15.23■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Slco2b1Q8BXB6 683 aa15.23■□□□□ 0.03
Ccdc88c-204ENSMUST00000223097 Barhl2Q8VIB5 384 aa15.23■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms