RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Vav1P27870 845 aa13.88□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 IhhP97812 411 aa13.88□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Ubn1Q4G0F8 1135 aa13.88□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Pik3r5Q5SW28 871 aa13.88□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Dclre1bQ8C7W7 541 aa13.88□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 DeraQ91YP3 318 aa13.88□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 FdpsQ920E5 353 aa13.88□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Rnf112Q96DY5 654 aa13.88□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Bzw1Q9CQC6 419 aaKnown RBP13.88□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 AticQ9CWJ9 592 aaKnown RBP13.88□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Oxct1Q9D0K2 520 aaKnown RBP13.88□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 AvenQ9D9K3 342 aa13.88□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Gpatch1Q9DBM1 930 aa13.88□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Sfmbt1Q9JMD1 863 aa13.88□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Tmed2Q9R0Q3 201 aa13.88□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Mpp2Q9WV34 552 aa13.88□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Mbd1Q9Z2E2 636 aa13.88□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Lrrc73B2RWC4 316 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Gm7694J3QNH8 270 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Dusp8O09112 663 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 EgfP01132 1217 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Fgfr1P16092 822 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Pax3P24610 479 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Gjb3P28231 270 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Ptcd3Q14C51 685 aaKnown RBP13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Slc38a5Q3U1J0 479 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 McuQ3UMR5 350 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Ugt3a1Q3UP75 523 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Shroom1Q5SX79 823 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Avpr1aQ62463 423 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Nlrp4fQ66X05 959 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 OcrlQ6NVF0 900 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 MregQ6NVG5 214 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Xlr3bQ6P205 226 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Cacna2d2Q6PHS9 1154 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 PhkbQ7TSH2 1085 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Gabbr2Q80T41 940 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Cpsf7Q8BTV2 471 aaKnown RBP13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Sh3rf3Q8C120 878 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Wdr27Q8C5V5 780 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Pkn3Q8K045 878 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Snap47Q8R570 413 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Unc93b1Q8VCW4 598 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Spns2Q91VM4 549 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Tm4sf4Q91XD3 202 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Pcdhac2Q91Y09 1006 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Slc39a3Q99K24 317 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Pcsk1nQ9QXV0 258 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Syt5Q9R0N5 386 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Myo16Q5DU14 1919 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Plxna1P70206 1894 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Tnfrsf14A0A1W2P7D5 276 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Olfr1354E9Q5G9 310 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 SmgcF6VRN1 385 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Myl4P09541 193 aaKnown RBP13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Lmo2P25801 158 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Sar1aP36536 198 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Pla2g4dQ50L43 825 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Prkaa1Q5EG47 559 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 PkdccQ5RJI4 492 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Ddx4Q61496 702 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Trim24Q64127 1051 aaKnown RBP13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Tpp2Q64514 1262 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Krt77Q6IFZ6 572 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Rxfp1Q6R6I7 758 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Prl3a1Q78Y73 227 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Got1l1Q7TSV6 404 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Zswim5Q80TC6 1188 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Cep104Q80V31 926 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Hspbap1Q8BK58 483 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 EmsyQ8BMB0 1264 aaKnown RBP13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Gtf3c4Q8BMQ2 817 aaKnown RBP13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Pak5Q8C015 719 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Tp53inp2Q8CFU8 221 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Pnpt1Q8K1R3 783 aaKnown RBP13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Vps37cQ8R105 352 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Htra2Q9JIY5 458 aa13.87□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 ThadaA8C756 1938 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Sf3b1Q99NB9 1304 aaKnown RBP13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Igkv10-96A0A140T8M1 115 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Nup62clA2AG10 272 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Lonrf2B2RT44 518 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Apba1B2RUJ5 842 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 C7D3YXF5 845 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Gm20503G3UZK1 150 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Zfp212G3X8R7 492 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Gm3138K7N754 218 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Acot1O55137 419 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Icam1P13597 537 aaKnown RBP13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 TktP40142 623 aaKnown RBP13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 TdgP56581 421 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Neurog2P70447 263 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Creb1Q01147 341 aaKnown RBP13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Sox8Q04886 464 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Zfp957Q3UT76 567 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Slc5a10Q5SWY8 596 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Sec23ipQ6NZC7 998 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Jade1Q6ZPI0 834 aaKnown RBP13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Olfr1046Q7TR79 316 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Olfr212Q7TS33 327 aa13.86□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 33.9 ms