RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Use1Q9CQ56 270 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Zfy1P10925 782 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Prkg2Q61410 762 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Pcmtd2Q8BHD8 359 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Mcfd2Q8K5B2 145 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 DgkgQ91WG7 788 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Syt12Q920N7 421 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Rab11fip1Q9D620 645 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Gpatch1Q9DBM1 930 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Gpc6Q9R087 555 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Gm5478D3Z6R0 159 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Phka1P18826 1241 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 UnkQ8BL48 810 aaKnown RBP17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Plscr1Q9JJ00 328 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Klhl32A2AJX0 620 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Rexo5D3YW29 759 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Tnks2Q3UES3 1166 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Fam196bQ6GQV1 535 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Q8BGC1 442 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Hkdc1Q91W97 915 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Sesn3Q9CYP7 492 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Frmd8Q3UFK8 466 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Lrrc75bQ7TPD7 306 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Tbc1d22bQ80VE5 505 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Kank2Q8BX02 843 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Uba3Q8C878 462 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Inpp5bQ8K337 993 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Rrbp1Q99PL5 1605 aaKnown RBP17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Prkar1aQ9DBC7 381 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Krt28A6BLY7 462 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 PbsnO08976 174 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Shoc2O88520 582 aaKnown RBP17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Abi2P62484 446 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 LxnP70202 222 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Slc7a1Q09143 622 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Smu1Q3UKJ7 513 aaKnown RBP17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Tab3Q571K4 716 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 PhgdhQ61753 533 aaKnown RBP17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Hist2h2abQ64522 130 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Fam149b1Q6NSV7 578 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Prdm8Q8BZ97 687 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Ppwd1Q8CEC6 646 aaKnown RBP17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Ankef1Q9D2J7 775 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Gm4312K9J7E2 289 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Aff1O88573 1216 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Mtco1P00397 514 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Gm813Q3UWK9 176 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Gm5431Q5NCB3 844 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Mettl25Q6NXH8 597 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Ssxb5Q6XAS2 159 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 LRWD1Q8BUI3 648 aaKnown RBP17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 SynpoQ8CC35 929 aaKnown RBP17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Cdk17Q8K0D0 523 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Ulk2Q9QY01 1037 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Wdr19Q3UGF1 1341 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 MndalD0QMC3 538 aaKnown RBP17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Kctd17E0CYQ0 296 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Ten1Q9D7K2 161 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Rprd2Q6NXI6 1469 aaKnown RBP17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Nckap5lQ6GQX2 1323 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Kcnj5P48545 419 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Olfr8Q60892 310 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Sel1l3Q80TS8 1137 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Mettl21eQ8CDZ2 244 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Trmt6Q8CE96 497 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Golph3lQ8R088 285 aaKnown RBP17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Gramd1aQ8VEF1 722 aa17.07■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Spin2-ps6A0A140T8V2 174 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Xlr5bA2BI50 236 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Stxbp1O08599 594 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Btbd3P58545 530 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Wdr41Q3UDP0 460 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Klra3Q64329 266 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Med8Q9D7W5 268 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Ccdc88cQ6VGS5 2009 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 AqrQ8CFQ3 1481 aaKnown RBP17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Nr5a1P33242 462 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Enoph1Q8BGB7 257 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Cdkn2aipQ8BI72 563 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 4921511C20RikQ8BVT7 469 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Dhx32Q8BZS9 744 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Tmem63cQ8CBX0 802 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Pbdc1Q9D0B6 198 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Nudt12Q9DCN1 462 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Copg2Q9QXK3 871 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Mug1P28665 1476 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Odc1P00860 461 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Mucl2P02815 138 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Prox1P48437 737 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Slc1a2P43006 572 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 IduaP48441 634 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Klhl23Q6GQU2 558 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Atg16l2Q6KAU8 623 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Dpy30Q99LT0 99 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Cnpy3Q9DAU1 276 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Gm28036V9GXJ1 658 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Pitpnm2Q6ZPQ6 1335 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Kdm6aO70546 1401 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Nr3c1P06537 783 aa17.06■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Gpr182P43142 395 aa17.06■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms