RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Prl2a1Q9JHK0 228 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Atp6v0a1Q9Z1G4 839 aaKnown RBP13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Krt90E9Q1Z0 538 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Gm10250G3X9L6 160 aaKnown RBP13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 PrkcdP28867 674 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Mrgprx2Q3UG50 352 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Gprin1Q3UNH4 932 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Gm8773Q3UQ24 132 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 KizQ3UXL4 695 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Marveld2Q3UZP0 555 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Cand1Q6ZQ38 1230 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Neto2Q8BNJ6 525 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Uba3Q8C878 462 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Arhgap29Q8CGF1 1266 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Smyd2Q8R5A0 433 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Plekhh3Q8VCE9 796 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Fbxo33Q8VE08 562 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Olfr385Q8VGT1 312 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Tssk3Q9D2E1 268 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Actrt1Q9D9J3 376 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 MrgbpQ9DAT2 204 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Atp5hQ9DCX2 161 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Plod3Q9R0E1 741 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Nupr1Q9WTK0 80 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Scnn1bQ9WU38 638 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Krt16Q9Z2K1 469 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Arid2E9Q7E2 1828 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Gm1141B9EJU1 475 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 L1camP11627 1260 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Gsta4P24472 222 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Gsta3P30115 221 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 ItgavP43406 1044 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Ranbp9P69566 653 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Msx3P70354 204 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Gata5P97489 404 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 GmpsQ3THK7 693 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Smcr8Q3UMB5 935 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Cfhr2Q4LDF6 332 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Prpf38bQ80SY5 542 aaKnown RBP13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Gabbr2Q80T41 940 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Pi4kbQ8BKC8 816 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Hsdl1Q8BTX9 330 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Phactr3Q8BYK5 558 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 D3Z070 196 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Tnfrsf11bO08712 401 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 ChkaO54804 453 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 S100bP50114 92 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Tfdp1Q08639 410 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Grid2Q61625 1007 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Capn11Q6J756 714 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 ErfeQ6PGN1 340 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Gucy2gQ6TL19 1100 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Supt20hQ7TT00 530 aaKnown RBP13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Q810S2 196 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Spata21Q8BHW6 681 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Nudcd3Q8R1N4 363 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 1700123K08RikQ9D991 295 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Chst7Q9EP78 484 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 ParvbQ9ES46 365 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Fut2Q9JL27 347 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Piwil1Q9JMB7 862 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Magel2Q9QZ04 1284 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Krt27Q9Z320 448 aa13.4□□□□□ -0.26
Nup88-203ENSMUST00000108531 Atad5Q4QY64 1826 aa13.4□□□□□ -0.27
Nup88-203ENSMUST00000108531 Gm11985A0A1B0GS61 206 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Gm20509G3UZF1 325 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Dlg3P70175 849 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Fam198aQ3UY90 562 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Ampd1Q3V1D3 745 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Kctd8Q50H33 476 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Als2clQ60I26 952 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Hsph1Q61699 858 aaKnown RBP13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Q6GQV0 436 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Zfp454Q80Y34 536 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Ddx1Q91VR5 740 aaKnown RBP13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Fgd4Q91ZT5 766 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Tas1r2Q925I4 843 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Toe1Q9D2E2 511 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Cd97Q9Z0M6 818 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Gon4lQ9DB00 2260 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Abcb5B5X0E4 1255 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Raph1F2Z3U3 1266 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 AlpiF8VPQ6 554 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Gm3415J3QMS8 315 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Sept7O55131 436 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Soat2O88908 525 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 KitP05532 979 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Chrm1P12657 460 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 UmpsP13439 481 aaKnown RBP13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Serpina6Q06770 397 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 McuQ3UMR5 350 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 FcgrtQ61559 365 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Map3k7Q62073 579 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Ankrd6Q69ZU8 712 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 ScapQ6GQT6 1276 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Mbtd1Q6P5G3 631 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Dcaf15Q6PFH3 600 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Gigyf2Q6Y7W8 1291 aaKnown RBP13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Cand2Q6ZQ73 1235 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Got1l1Q7TSV6 404 aa13.39□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 45.3 ms