RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Arhgap15Q811M1 481 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Epb41l5Q8BGS1 731 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Arhgef33Q8BW86 850 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Elmo3Q8BYZ7 720 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Wdr27Q8C5V5 780 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Tmem63cQ8CBX0 802 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Nlrp10Q8CCN1 673 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Tmem198bQ8CFU0 350 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Pitrm1Q8K411 1036 aaKnown RBP12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Pth2rQ91V95 546 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Elp2Q91WG4 831 aaKnown RBP12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Ndufb5Q9CQH3 189 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Chordc1Q9D1P4 331 aaKnown RBP12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 4930578G10RikQ9D4Q4 153 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Rin2Q9D684 903 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Gtf2h1Q9DBA9 547 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Lat2Q9JHL0 203 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Slc2a5Q9WV38 501 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Slc12a7Q9WVL3 1083 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Tjp2Q9Z0U1 1167 aaKnown RBP12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Myo10F8VQB6 2062 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Vmn1r55E9Q8I6 310 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Olfr1022L7MTT3 315 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Opn1mwO35599 359 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 ZfxP17012 799 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 RargP18911 458 aaKnown RBP12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Gja1P23242 382 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Pdrg1P59048 133 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Fermt1P59113 677 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Cntn5P68500 1098 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Vamp7P70280 220 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Ebf1Q07802 591 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Zfyve27Q3TXX3 415 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Afg1lQ3V384 480 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Nfe2l2Q60795 597 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Gpr17Q6NS65 339 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 DgkqQ6P5E8 934 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Slc43a1Q8BSM7 564 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Vmn1r188Q8K3N2 308 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Fam161aQ8QZV6 448 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Adgrf1Q8VEC3 908 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Mark1Q8VHJ5 795 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Snrnp25Q8VIK1 123 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Oas1cQ924S2 362 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Grtp1Q9D3N8 359 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Q9D4A5 307 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Cyp2c55Q9D816 490 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 FastkQ9JIX9 511 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Sorbs3Q9R1Z8 733 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Gadd45gQ9Z111 159 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Ate1Q9Z2A5 516 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Gvin1Q80SU7 2427 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Plxnd1Q3UH93 1925 aa12.85□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Ms4a14A0A087WSD2 1232 aa12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Gm36028A0A0U1RPM1 299 aa12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Rpl9-ps6A0A140T8T4 192 aa12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 9230113P08RikD3YWX3 137 aa12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Ttc17E9PVB5 1198 aa12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Fbrsl1E9Q9T0 1031 aa12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Tnfrsf18O35714 228 aa12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Mmp15O54732 657 aa12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Gria2P23819 883 aa12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Cd247P24161 164 aa12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 TecP24604 630 aa12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Rpl9P51410 192 aaKnown RBP12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Hrh2P97292 397 aa12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Ect2Q07139 913 aa12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 CttnQ60598 546 aaKnown RBP12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Olfr670Q7TRP3 312 aa12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Ankrd24Q80VM7 985 aa12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Kxd1Q80XH1 177 aa12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Tmprss7Q8BIK6 829 aa12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Pcyox1lQ8C7K6 495 aa12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Kctd15Q8K0E1 283 aa12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Gtf3c1Q8K284 2101 aa12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Vmn1r206Q8R277 312 aa12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 FtcdQ91XD4 541 aa12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 SardhQ99LB7 919 aa12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 SgshQ9EQ08 502 aa12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Hacl1Q9QXE0 581 aa12.84□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Eml5Q8BQM8 1977 aa12.83□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Zfp266E9Q2S7 604 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Vmn2r76E9Q3F5 853 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 BC051665E9Q623 330 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Nfxl1E9Q8I7 918 aaKnown RBP12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Farp1F8VPU2 1048 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Gm3415J3QMS8 315 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Hoxa9P09631 271 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Ephb2P54763 986 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Cdh9P70407 786 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 CtscP97821 462 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Zbtb48Q1H9T6 681 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Usp30Q3UN04 517 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Slc6a4Q60857 630 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Igfbp7Q61581 281 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 TCAIMQ66JZ4 499 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 ManeaQ6NXH2 462 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Hdac10Q6P3E7 666 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 WtipQ7TQJ8 398 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Trim65Q8BFW4 522 aa12.83□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 66.5 ms