RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 PdxkQ8K183 312 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Fam114a2Q8VE88 497 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Dnaaf1Q9D2H9 634 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Krt20Q9D312 431 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Pak1ip1Q9DCE5 382 aaKnown RBP7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Numa1E9Q7G0 2094 aaKnown RBP7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 EloblA6PWE0 161 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Gm10717D3Z1I8 228 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Enpp1P06802 906 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Zfp42P22227 288 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 RalaP63321 206 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Tespa1Q3U132 458 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 FancbQ5XJY6 703 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Mapk6Q61532 720 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Myo6Q64331 1265 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Epn1Q80VP1 575 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Q8C5C9 218 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Mfsd14bQ8CIA9 507 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Gas2l1Q8JZP9 678 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Cetn2Q9R1K9 172 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ankrd2Q9WV06 328 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Pld1Q9Z280 1074 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ptgdr2Q9Z2J6 382 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Gm7694J3QNH8 270 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Fam207aP58468 219 aaKnown RBP7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Stmn4P63042 189 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Pkn1P70268 946 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Tmprss15P97435 1069 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Klra9Q2TJJ8 266 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Srbd1Q497V5 1015 aaKnown RBP7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ift20Q61025 132 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Smarcd1Q61466 515 aaKnown RBP7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Casd1Q7TN73 797 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Usp1Q8BJQ2 784 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Smad3Q8BUN5 425 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Prr33Q8C494 260 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 4931406P16RikQ8C5X1 1059 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Myef2Q8C854 591 aaKnown RBP7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Syn3Q8JZP2 579 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 SfpqQ8VIJ6 699 aaKnown RBP7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ndufb5Q9CQH3 189 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Olfr703Q9EPF5 319 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Rtn3Q9ES97 964 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Dkc1Q9ESX5 509 aaKnown RBP7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Cbx8Q9QXV1 362 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 IkbkeQ9R0T8 717 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ror2Q9Z138 944 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Gm12394A2AKP6 982 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 GfapP03995 430 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Rasgrf1P27671 1262 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Mc4rP56450 332 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Smarcad1Q04692 1021 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Dact3Q0PHV7 610 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Pi4k2aQ2TBE6 479 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Gbp8Q2V6D6 525 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Sin3bQ62141 1098 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Tmem164Q6PHN7 296 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Tcp10aQ80W76 438 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Wdr35Q8BND3 1181 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Cep57Q8CEE0 500 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Tmem30aQ8VEK0 364 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Afg3l1Q920A7 789 aaKnown RBP7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Mfsd5Q921Y4 450 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Trim66Q924W6 1242 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Mrpl9Q99N94 265 aaKnown RBP7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Cep19Q9CQA8 163 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Cse1lQ9ERK4 971 aaKnown RBP7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Pck1Q9Z2V4 622 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Igkv17-121A0A0G2JFA8 117 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Skint6A7XUZ6 1240 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Unc13dB2RUP2 1085 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 BC049352E9Q2Z6 85 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Sypl2O89104 264 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Hcls1P49710 486 aaKnown RBP7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Nek10Q3UGM2 1111 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 RilpQ5ND29 369 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Acvrl1Q61288 502 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Atg9bQ6EBV9 922 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Tha1Q6XPS7 400 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Tdpoz2Q717B2 364 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Prl3a1Q78Y73 227 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ttc24Q8BYG0 334 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ablim1Q8K4G5 861 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Sar1bQ9CQC9 198 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ccdc130Q9D516 385 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Cnot8Q9D8X5 292 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Caln1Q9JJG7 219 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Asap1Q9QWY8 1147 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Cnot1Q6ZQ08 2375 aaKnown RBP7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Col24a1Q30D77 1733 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Wee1P47810 646 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Sdr16c6Q05A13 316 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 IdsQ08890 552 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Tubb2aQ7TMM9 445 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Cep104Q80V31 926 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Them6Q80ZW2 207 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Pyhin1Q8BV49 420 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Rasal3Q8C2K5 1041 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Tmem145Q8C4U2 746 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Fbxo43Q8CDI2 640 aa7.19□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms